@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0339: (2017-12-20 )
MYHSLGNQFDTRTRTSRKIRRERSCSDMDREPVTVRSYANIAIIKYWGKKKEKEMVPATSSISLTLENMYTETTLSPLPANVTADEFYINGQLQNEVEHAKMSKIIDRYRPAGEGFVRIDTQNNMPTAAGLSSSSSGLSALVKACNAYFKLGLDRSQLAQEAKFASGSSSRSFYGPLGAWDKDSGEIYPVETDLKLAMIMLVLEDKKKPISSRDGMKLCVETSTTFDDWVRQSEKDYQDMLIYLKENDFAKIGELTEKNALAMHATTKTASPAFSYLTDASYEAMDFVRQLREKGEACYFTMDAGPNVKVFCQEKDLEHLSEIFGQRYRLIVSKTKDLSQDDCC

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FM0_A_3(3QT8)
?
[Raw transfer]



FM0_A_3(3QT7)
?
[Raw transfer]



FM0_B_5(3QT8)
?
[Raw transfer]



2P0_B_4(3QT6)
?
[Raw transfer]



2P0_A_3(3QT6)
?
[Raw transfer]



2P0_A_3(4DU8)
?
[Raw transfer]



2P0_A_3(4DPY)
?
[Raw transfer]



DP6_A_3(4DU7)
?
[Raw transfer]



FM0_B_5(4DPU)
?
[Raw transfer]



2P0_B_4(4DPY)
?
[Raw transfer]



2P0_B_7(4DU8)
?
[Raw transfer]



DP6_B_4(4DU7)
?
[Raw transfer]



FM0_B_4(3QT7)
?
[Raw transfer]



FM0_A_3(4DPU)
?
[Raw transfer]



AGS_B_5(4DPT)
?
[Raw transfer]



GOL_A_5(4Z7C)
DMD_SULSO
[Raw transfer]



GOL_A_4(4DPX)
?
[Raw transfer]



FMT_A_5(4DPX)
?
[Raw transfer]



AGS_A_4(4DPU)
?
[Raw transfer]



FMT_B_9(4DPX)
?
[Raw transfer]



FMT_B_8(4DPX)
?
[Raw transfer]



EDO_A_10(2GS8)
?
[Raw transfer]



EDO_A_6(2GS8)
?
[Raw transfer]
1 PsiBlast_PDB 99.5666% -82 - C1 -2GS8 3.0 ?
50 HHSearch 97.8769% -82 - C1 -2GS8 2.1 ?
48 HHSearch 64.2930% 1 - C1 -3D4J - MVD1_HUMAN -
49 HHSearch 63.5027% -4 - C1 -2HKE - ? -
58 HHSearch 63.2936% 23 - C1 -2HK3 - ? -
11 PsiBlast_PDB 62.7238% 28 - C1 -4DPX 3.1 ?
6 PsiBlast_PDB 62.3838% 21 - C1 -3QT7 7.8 ?
12 PsiBlast_PDB 62.3238% 27 - C1 -4DPY 7.1 ?
9 PsiBlast_PDB 62.1338% 17 - C1 -3QT8 7.3 ?
7 PsiBlast_PDB 62.1038% 18 - C1 -4DPT - ? -
8 PsiBlast_PDB 61.9838% 19 - C1 -4DU7 7.3 ?
4 PsiBlast_PDB 61.8838% 32 - C1 -3QT5 - ? -
5 PsiBlast_PDB 61.8438% 31 - C1 -3QT6 7.1 ?
14 PsiBlast_PDB 61.8338% 30 - C1 -4DU8 7.1 ?
37 Fugue 61.3926% 2 - C1 -2HKE - ? -
25 PsiBlast_CBE 61.3638% 24 - C1 -4DPY 7.4 ?
10 PsiBlast_PDB 61.3238% 29 - C1 -4DPU 6.7 ?
26 PsiBlast_CBE 61.0738% 28 - C1 -4DPX 2.9 ?
21 PsiBlast_CBE 60.9838% 25 - C1 -4DU7 6.7 ?
27 PsiBlast_CBE 60.8838% 34 - C1 -4DPU 5.8 ?
29 PsiBlast_CBE 60.7638% 25 - C1 -4DU8 6.8 ?
22 PsiBlast_CBE 60.3538% 25 - C1 -4DPT 5.9 ?
23 PsiBlast_CBE 60.0538% 24 - C1 -3QT7 7.6 ?
28 PsiBlast_CBE 59.0138% 21 - C1 -3QT8 7.3 ?
24 PsiBlast_CBE 58.8938% 25 - C1 -3QT6 7.0 ?