@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0514: (2017-12-23 )
MSTTIIGFPRLGEFRELKFTTEKYFRKEISEEELLAAAKDLRAKHWNIVKEKGITEIPSNDFSHYDNFLDAAFLFNVVPASVQNLDLSDLERYFALGRGYQGEKGDVRALPMKKWFNTNYHYIVPKFEKDTQVKLAGHKIFDEFQEAKELGLNTRPVLVGPFTFLQLSDFEEGVKADDFVDSFVAAYQEVFAKLADLGATRIQLDEAALVKDLTAEEKALFLNLYNKLLADKKGLEVLFQTYFGDVRDVYADLVNLPVDAIGLDFVEGKKTLELVKGGFPADKTLYVGIVNGKNIWRNNYEKSLTVLEQIPAENIVLTSSCSLLHVPFTTANEEFEPALLNHFAFAVEKLDEIRDLDAIRNGQGSEALAANKELFATERVGENAELRARIAGLTDADYTRLPAFAEREAIQEEAFKLPALPTTTIGSFPQTKEVRAKRLAYRKGELSQKEYDAFLAETIDEWIKWQEDIDFDVLVHGEFERNDMVEYFGQNLSGYLFSKNGWVQSYGMRGVKPPIIWGDVTRLNPITVKWSSYAQSRTNKPVKGMLTGPVTILNWSFPREDISIKDSTLQIALAIKDEVLDLEAAGVKIIQIDEAALREKLPLRRSDWYEDYLDWAIPAFRLVHSTVAPDTQIHTHMCYSEFTDIIPAIDNMDADVISFEASRSNLEILDELKAKNFQTEVGPGVYDIHSPRVPNEGEIDNTIEAILAKVPSKKVWINPDCGLKTRGIPETKESLIRLVEAAKAAREKL

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

39S_A_6(4QQU)
METE_CANAL
[Raw transfer]



39S_A_6(4QQU)
METE_CANAL
[Raw transfer]



THG_A_9(1U22)
METE1_ARATH
[Raw transfer]



THG_A_9(1U22)
METE1_ARATH
[Raw transfer]



HCS_A_3(4L5Z)
METE_CANAL
[Raw transfer]



C2F_A_9(1U1J)
METE1_ARATH
[Raw transfer]



C2F_A_9(1U1J)
METE1_ARATH
[Raw transfer]



GLN_A_3(4L6O)
METE_CANAL
[Raw transfer]



MTX_A_4(4L6H)
METE_CANAL
[Raw transfer]



HCS_A_8(1U22)
METE1_ARATH
[Raw transfer]



HCS_A_3(4L6H)
METE_CANAL
[Raw transfer]



TRS_A_12(4ZTY)
?
[Raw transfer]
2 PsiBlast_PDB 89.3445% 11 - C4 -4ZTY - ? -
1 PsiBlast_PDB 89.1745% 13 - C4 -4ZTX - ? -
72 HHSearch 87.9745% 10 - C4 -4ZTY 2.5 ?
5 PsiBlast_PDB 84.7943% 10 - C4 -3PPG - METE_CANAL -
73 HHSearch 84.2743% 16 - C4 -1T7L - METE_THEMA -
19 PsiBlast_PDB 84.1843% 15 - C4 -1T7L - METE_THEMA -
76 HHSearch 84.1047% 11 - C4 -3T0C - METE_STRMU -
12 PsiBlast_PDB 83.9746% 10 - C4 -3L7R - METE_STRMU -
71 HHSearch 83.2443% 13 - C4 -1XPG - METE_THEMA -
74 HHSearch 83.0445% 28 - C4 -4L6H 1.0 METE_CANAL
25 PsiBlast_CBE 83.0343% 19 - C4 -3BQ5 - METE_THEMA -
26 PsiBlast_CBE 82.9043% 19 - C4 -1T7L - METE_THEMA -
77 HHSearch 82.4547% 6 - C4 -2NQ5 - METE_STRMU -
69 HHSearch 81.8046% 26 - C4 -1U22 5.4 METE1_ARATH
3 PsiBlast_PDB 81.6743% 10 - C4 -3PPC - METE_CANAL -
70 HHSearch 81.5646% 27 - C4 -1U1J 4.5 METE1_ARATH
6 PsiBlast_PDB 81.5143% 23 - C4 -4L5Z 5.0 METE_CANAL
20 PsiBlast_PDB 81.3643% 18 - C4 -3BQ5 - METE_THEMA -
14 PsiBlast_PDB 81.2644% 31 - C4 -1U1H - METE1_ARATH -
17 PsiBlast_PDB 81.2344% 28 - C4 -1U22 5.4 METE1_ARATH
15 PsiBlast_PDB 81.1444% 29 - C4 -1U1J 4.5 METE1_ARATH
75 HHSearch 80.6845% 32 - C4 -4QQU 8.9 METE_CANAL
10 PsiBlast_PDB 80.4943% 22 - C4 -4QQU 8.9 METE_CANAL
8 PsiBlast_PDB 80.1543% 33 - C4 -4L6H 4.9 METE_CANAL
9 PsiBlast_PDB 80.0743% 24 - C4 -4L6O 2.9 METE_CANAL