@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0728: (2017-12-28 )
MTETLIKIENLHKSFGKNEVLKGINLEIKRGEVVVIIGPSGSGKSTLLRSMNLLEEATKGKVIFEGVDITDKKNDLFAMREKMGMVFQQFNLFPNMTVMENITLSPIKTKGESREVAEKRAQELLEKVGLPDKADAYPQSLSGGQQQRIAIARGLAMEPDVLLFDEPTSALDPEMVGEVLAVMQDLAKSGMTMVIVTHEMGFAREVADRVIFMADGVVVEDGTPEQIFEQTQEQRTKDFLRKVL

Atome Classification :

(38 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_6(4YMV)
?
[Raw transfer]




ATP_J_5(4YMU)
?
[Raw transfer]




ACP_A_4(5X40)
CBIO_RHOCB
[Raw transfer]




ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




ATP_E_5(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ATP_H_8(2FGK)

[Raw transfer]




AGS_B_6(3C4J)
?
[Raw transfer]




ATP_E_5(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ACP_B_6(5X40)
CBIO_RHOCB
[Raw transfer]




ATP_G_7(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_F_6(2FGK)
HLYBP_ECOLX
[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ATP_H_8(2FGJ)

[Raw transfer]




ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_J_5(4YMV)
?
[Raw transfer]




ADP_A_5(2Q0H)
?
[Raw transfer]




ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




ADP_A_4(1G6H)
LIVG_METJA
[Raw transfer]




ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_A_9(1XEF)
HLYBP_ECOLX
[Raw transfer]




ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]




128_A_2(2PMK)

[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




ADP_B_6(2Q0H)
?
[Raw transfer]




ADP_B_2(2FFA)

[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




12D_A_2(3B5J)

[Raw transfer]




AT4_A_5(2OLK)
?
[Raw transfer]




AT4_C_7(2OLK)
?
[Raw transfer]




ADP_B_6(2OLJ)
?
[Raw transfer]




ADP_B_2(2FF7)

[Raw transfer]




ATP_C_3(1VCI)
?
[Raw transfer]




LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]




LMT_B_4(4MKI)
ECFA2_CALS4
[Raw transfer]




IPA_A_6(3TIF)
Y796_METJA
[Raw transfer]




13 PsiBlast_PDB 95.1763%-107 - C1 -4U02 - ? -
27 PsiBlast_CBE 94.8363%-122 - C1 -2OLK 6.0 ?
6 PsiBlast_PDB 94.7363%-121 - C1 -3C4J 6.7 ?
29 PsiBlast_CBE 94.4063%-121 - C1 -2OLK 6.0 ?
12 PsiBlast_PDB 94.3363%-113 - C1 -4U00 5.9 ?
28 PsiBlast_CBE 94.2963%-125 - C1 -2OLK 6.1 ?
2 PsiBlast_PDB 94.1663%-130 - C1 -2OLJ 5.8 ?
1 PsiBlast_PDB 93.6063%-115 - C1 -3C41 - ? -
3 PsiBlast_PDB 93.4863%-126 - C1 -2OLK 6.0 ?
32 PsiBlast_CBE 93.2063%-125 - C1 -4YMU 6.1 ?
5 PsiBlast_PDB 92.8763%-121 - C1 -2Q0H 5.5 ?
4 PsiBlast_PDB 92.8363%-127 - C1 -2OUK - ? -
31 PsiBlast_CBE 92.6963%-121 - C1 -4YMV 5.3 ?
22 PsiBlast_CBE 92.6263%-124 - C1 -3C4J 5.0 ?
23 PsiBlast_CBE 92.0463%-128 - C1 -2Q0H 5.9 ?
30 PsiBlast_CBE 91.2563%-119 - C1 -2OLJ 5.7 ?
21 PsiBlast_CBE 90.9663%-122 - C1 -3C41 5.9 ?
10 PsiBlast_PDB 90.6363%-122 - C1 -4YMV 5.4 ?
9 PsiBlast_PDB 90.3863%-121 - C1 -4YMU 6.5 ?
7 PsiBlast_PDB 89.2663%-122 - C1 -4YMS - ? -
14 PsiBlast_PDB 77.9852% -5 - C1 -1B0U 6.1 HISP_SALTY
94 PsiBlast_CBE 60.6036%-107 - C1 -3FVQ 7.9 FBPC_NEIG1
93 PsiBlast_CBE 59.9236%-106 - C1 -3FVQ 8.5 FBPC_NEIG1
51 PsiBlast_CBE 59.7338%-113 - C1 -1VCI 3.9 ?
168 Fugue 59.4650% 5 - C1 -1B0U 5.8 HISP_SALTY
143 HHSearch 59.0536%-112 - C1 -3FVQ 8.5 FBPC_NEIG1
130 PsiBlast_CBE 52.7931% -56 - C1 -1G6H 6.5 LIVG_METJA
49 PsiBlast_CBE 51.0941% 38 - C1 -3TIF 3.8 Y796_METJA
102 PsiBlast_CBE 43.3536% -34 - C1 -2FF7 5.4
99 PsiBlast_CBE 43.3236% -35 - C1 -2PMK 5.5
122 PsiBlast_CBE 41.9936% -25 - C1 -2FGK 6.4 HLYBP_ECOLX
138 PsiBlast_CBE 40.8736% -31 - C1 -2FFA 5.4
120 PsiBlast_CBE 40.3336% -24 - C1 -2FGK 5.7 HLYBP_ECOLX
134 PsiBlast_CBE 39.8436% -27 - C1 -2FGJ 5.7
142 PsiBlast_CBE 38.7336% -26 - C1 -1XEF 5.0 HLYBP_ECOLX
119 PsiBlast_CBE 37.7536% -23 - C1 -2FGK 6.2
137 PsiBlast_CBE 36.6136% -26 - C1 -2FGJ 5.9 HLYBP_ECOLX
121 PsiBlast_CBE 35.2736% -20 - C1 -2FGK 6.2 HLYBP_ECOLX