@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0812: (2017-12-30 )
MHYDASYISFDGILRKEILMTLLDVKHVQKIYKTRFQGNQVEALKDIHFTVEKGDYVAIMGESGSGKSTLLNILAMLDKPSRGQVYLNGTDTATIKNSQASSFRREKLGFVFQDFNLLDTLSVKDNILLPLVLSRRPITEMMKKLVVTAENLGINQLQEKYPYEISGGQKQRVAVARAIITEPEILLADEPTGALDSKSSAALLDVFDEINERGQTILMVTHSTAAASRAKRVLFIKDGILYNQIYRGEKTERQMFQEISDTLTVMASEVN

Atome Classification :

(37 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]



AGS_B_6(3C4J)
?
[Raw transfer]



ANP_J_5(3C41)
?
[Raw transfer]



ANP_B_7(2ONJ)
Y1866_STAAM
[Raw transfer]



ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]



ACP_A_4(5X40)
CBIO_RHOCB
[Raw transfer]



ANP_A_8(2ONJ)
Y1866_STAAM
[Raw transfer]



ANP_K_6(3C41)
?
[Raw transfer]



AGS_A_4(3C4J)
?
[Raw transfer]



ACP_B_6(5X40)
CBIO_RHOCB
[Raw transfer]



ADP_D_7(4HLU)
ECFA1_THEMA
[Raw transfer]



ATP_J_5(4YMU)
?
[Raw transfer]



ATP_J_5(4YMV)
?
[Raw transfer]



ADP_C_11(4HLU)
ECFA1_THEMA
[Raw transfer]



ADP_A_3(1F3O)
Y796_METJA
[Raw transfer]



ADP_A_3(3NHA)

[Raw transfer]



ADP_A_2(3NHB)

[Raw transfer]



ATP_A_6(4YMV)
?
[Raw transfer]



ATP_A_7(4YMU)
?
[Raw transfer]



ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]



ADP_A_5(2HYD)
Y1866_STAAM
[Raw transfer]



ADP_B_6(2HYD)
Y1866_STAAM
[Raw transfer]



AT4_B_6(2OLK)
?
[Raw transfer]



AT4_D_8(2OLK)
?
[Raw transfer]



ADP_A_2(4U00)
?
[Raw transfer]



ATP_A_2(3NH9)

[Raw transfer]



LMT_B_4(4MKI)
ECFA2_CALS4
[Raw transfer]



LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]
4 PsiBlast_PDB 87.2943%-102 - C1 -2PCJ - LOLD_AQUAE -
7 PsiBlast_PDB 86.2939% 0 - C- -5NIL - ? -
6 PsiBlast_PDB 86.2939% 0 - C- -5NIK - ? -
5 PsiBlast_PDB 85.0043%-104 - C1 -2PCL - LOLD_AQUAE -
149 Fugue 81.4131% -99 - C1 -3TUZ - METN_ECOLI -
147 Fugue 77.2233% -92 - C1 -1OXS - ? -
151 Fugue 76.7029% -87 - C1 -1Z47 - ? -
21 PsiBlast_CBE 74.9339% 38 - C1 -1L2T 6.6 Y796_METJA
22 PsiBlast_CBE 74.4939% 36 - C1 -3TIF 6.3 Y796_METJA
1 PsiBlast_PDB 74.0839% 35 - C1 -1L2T - Y796_METJA -
2 PsiBlast_PDB 73.4939% 31 - C1 -3TIF - Y796_METJA -
140 HHSearch 72.9333%-106 - C1 -3DHW - METN_ECOLI -
3 PsiBlast_PDB 72.8039% 43 - C1 -1F3O 6.0 Y796_METJA
118 PsiBlast_CBE 72.6833%-108 - C1 -3FVQ - FBPC_NEIG1 -
119 PsiBlast_CBE 72.4333%-111 - C1 -3FVQ - FBPC_NEIG1 -
65 PsiBlast_CBE 70.8735% -35 - C1 -1B0U 6.1 HISP_SALTY
27 PsiBlast_CBE 70.2836% 10 - C1 -3TUI - METN_ECOLI -
64 PsiBlast_CBE 70.2735%-110 - C1 -2YYZ - ? -
9 PsiBlast_PDB 70.0236% 13 - C1 -3TUI - METN_ECOLI -
20 PsiBlast_PDB 69.4033% -68 - C1 -2OLJ - ? -
17 PsiBlast_PDB 69.3939% -53 - C1 -4U00 4.4 ?
50 PsiBlast_CBE 66.6233% -58 - C1 -3C41 6.9 ?
31 PsiBlast_CBE 64.1637% -23 - C1 -4YMU 4.3 ?
62 PsiBlast_CBE 63.6236% 6 - C1 -4MKI 2.1 ECFA2_CALS4
30 PsiBlast_CBE 62.7337% -19 - C1 -4YMV 3.5 ?
63 PsiBlast_CBE 62.7036% 11 - C1 -4MKI 2.1 ECFA2_CALS4
14 PsiBlast_PDB 61.9837% -17 - C1 -4YMU 4.9 ?
15 PsiBlast_PDB 61.5837% -17 - C1 -4YMV 4.1 ?
111 PsiBlast_CBE 59.2931% -29 - C1 -4HLU 5.6 ECFA1_THEMA
110 PsiBlast_CBE 58.8831% -31 - C1 -4HLU 6.8 ECFA1_THEMA
114 PsiBlast_CBE 55.5232% -53 - C1 -3NH9 4.3
112 PsiBlast_CBE 54.8532% -55 - C1 -3NHB 4.6
113 PsiBlast_CBE 54.7332% -55 - C1 -3NHA 4.5
72 PsiBlast_CBE 48.4734% 26 - C1 -2ONJ 6.6 Y1866_STAAM
74 PsiBlast_CBE 47.8334% 26 - C1 -2HYD 3.2 Y1866_STAAM
73 PsiBlast_CBE 47.4634% 26 - C1 -2ONJ 6.4 Y1866_STAAM
75 PsiBlast_CBE 47.1334% 26 - C1 -2HYD 3.6 Y1866_STAAM