@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1020: (2018-01-03 )
MANKQDLIAKVAEATELTKKDSAAAVEAVFAAVADYLAAGEKVQLIGFGNFEVRERAERKGRNPQTGKEMTIAASKVPAFKAGKALKDAVK

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NACID_D_2(1OWG)
IHFB_ECOLI
[Raw transfer]

-

NACID_F_2(1P51)
DBH_NOSS1
[Raw transfer]

-

NACID_I_3(1P51)
DBH_NOSS1
[Raw transfer]

-

NACID_D_2(1P78)
DBH_NOSS1
[Raw transfer]

-

NACID_D_4(4QJU)
DBH_STAAM
[Raw transfer]

-

NACID_D_2(1P71)
DBH_NOSS1
[Raw transfer]

-

NACID_D_2(1P71)
DBH_NOSS1
[Raw transfer]

-

NACID_D_4(4QJU)
DBH_STAAM
[Raw transfer]

-

NACID_C_3(4QJU)
DBH_STAAM
[Raw transfer]

-

59 HHSearch 81.1074% -45 - C9 -4QJN - DBH_STAAM -
2 PsiBlast_PDB 80.3375% -45 - C9 -4QJN - DBH_STAAM -
3 PsiBlast_PDB 79.6575% -27 - C9 -4QJU 6.3 DBH_STAAM
53 HHSearch 78.2289% -22 - C9 -5FBM - DBH_STRMU -
1 PsiBlast_PDB 78.2289% -22 - C9 -5FBM - DBH_STRMU -
21 PsiBlast_CBE 75.6775% -10 - C9 -4QJU 7.0 DBH_STAAM
55 HHSearch 75.5664% - - C9 -3RHI - ? -
57 HHSearch 73.8470% -25 - C9 -1HUE - DBH_GEOSE -
4 PsiBlast_PDB 71.8970% -19 - C9 -1HUE - DBH_GEOSE -
43 Fugue 71.2166% -74 - C9 -1HUU - DBH_GEOSE -
7 PsiBlast_PDB 70.4059% -83 - C9 -4YEY - DBHA_ECOLI -
60 HHSearch 70.0757% -53 - C9 -4YF0 - DBHA_ECOLI -
6 PsiBlast_PDB 68.4765% - - C- -3RHI - ? -
12 PsiBlast_PDB 68.4059% -97 - C9 -4YFT - DBHA_ECOLI -
10 PsiBlast_PDB 68.2659% -99 - C9 -4YEW - DBHA_ECOLI -
14 PsiBlast_PDB 68.2158% -92 - C9 -4YFH - DBHA_ECOLI -
54 HHSearch 67.9064% - - C- -3RHI - ? -
64 HHSearch 64.8750% -33 - C9 -1RIY - DBH_THEMA -
13 PsiBlast_PDB 64.5758% -71 - C9 -4YF0 - DBHA_ECOLI -
61 HHSearch 64.4659% -83 - C9 -1MUL - DBHA_ECOLI -
66 HHSearch 60.2244% -8 - C9 -1P71 1128214396763122245304320.0 DBH_NOSS1
28 PsiBlast_CBE 59.5145% -3 - C9 -1P51 4.8 DBH_NOSS1
25 PsiBlast_CBE 57.1845% -5 - C9 -1P71 1128214396763122245304320.0 DBH_NOSS1
27 PsiBlast_CBE 56.1245% -2 - C9 -1P51 5.6 DBH_NOSS1
23 PsiBlast_CBE 55.9045% -9 - C9 -1P78 4.5 DBH_NOSS1
67 HHSearch 51.0637% 86 - C9 -1OWG Error IHFB_ECOLI