@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1604: (2018-01-15 )
MKKFVAELIGTFMLVFVGTGAVVFGNGLDGLGHLGIAFAFGLAIVVAAYSIGTVSGAHLNPAVSIAMFVNKRLSSSELVNYILGQVVGAFIASGAVFFLLANSGMSTASLGENALANGVTVFGGFLFEVIATFLFVLVIMTVTSESKGNGAIAGLVIGLSLMAMILVGLKITGLSVNPARSLAPAVLVGGAALQQVWIFILAPIAGGVLAALVAKNFLGTEE

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BGL_Q_17(1RC2)
AQPZ_ECOLI
[Raw transfer]




BOG_A_5(2O9D)
AQPZ_ECOLI
[Raw transfer]




BOG_A_2(2O9G)
AQPZ_ECOLI
[Raw transfer]




BOG_A_2(2O9G)
AQPZ_ECOLI
[Raw transfer]




BGL_I_9(1RC2)
AQPZ_ECOLI
[Raw transfer]




65 HHSearch 83.5240%-123 - C8 -3LLQ - AQPZ2_AGRFC -
64 HHSearch 82.8240%-127 - C8 -3LLQ - AQPZ2_AGRFC -
1 PsiBlast_PDB 81.2939%-119 - C8 -3LLQ - AQPZ2_AGRFC -
25 PsiBlast_CBE 80.9138% 0 - C- -2ABM - AQPZ_ECOLI -
24 PsiBlast_CBE 80.9138% 0 - C- -2ABM - AQPZ_ECOLI -
23 PsiBlast_CBE 80.9138% 0 - C- -2ABM - AQPZ_ECOLI -
22 PsiBlast_CBE 80.9138% 0 - C- -2ABM - AQPZ_ECOLI -
21 PsiBlast_CBE 80.9138% 0 - C- -2ABM - AQPZ_ECOLI -
3 PsiBlast_PDB 80.9138% 0 - C- -2ABM - AQPZ_ECOLI -
40 PsiBlast_CBE 79.2833%-151 - C8 -3M9I - MIP_SHEEP -
19 PsiBlast_PDB 78.6235%-158 - C8 -4NEF - AQP2_HUMAN -
11 PsiBlast_PDB 78.1138%-112 - C8 -3NE2 - AQPM_ARCFU -
75 HHSearch 77.4336%-145 - C8 -5C5X - AQP5_HUMAN -
59 HHSearch 77.4033%-138 * C8 *4NEF - AQP2_HUMAN -
13 PsiBlast_PDB 76.9833%-143 - C8 -2F2B - AQPM_METTM -
31 PsiBlast_CBE 76.7038%-113 - C8 -3NE2 - AQPM_ARCFU -
67 HHSearch 76.6731%-146 - C8 -3M9I - MIP_SHEEP -
77 HHSearch 76.5936%-149 - C8 -3D9S - AQP5_HUMAN -
34 PsiBlast_CBE 76.5038%-112 - C8 -3NE2 - AQPM_ARCFU -
63 HHSearch 76.2934%-119 - C8 -2O9G 2.5 AQPZ_ECOLI
5 PsiBlast_PDB 71.6038%-123 - C8 -2O9D 2.6 AQPZ_ECOLI
10 PsiBlast_PDB 71.4237%-120 - C8 -2O9G 2.4 AQPZ_ECOLI