@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1678: (2018-01-17 )
MIEYKNVALRYTEKDVLRDVNLQIEDGEFMVLVGPSGSGKTTMLKMINRLLEPTDGNIYMDGKRIKDYDERELRLSTGYVLQAIALFPNLTVEENIALIPEMKGWTKEEIAQKTEELLAKVGLPVAEYGHRLPSELSGGEQQRVGIVRAMIGQPKILLMDEPFSALDAISRKQLQVLTKELHKEFGMTTIFVTHDTDEALKLADRIAVLQDGEIRQVSNPETILKAPATDFVADLFGGSIHD

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_J_5(4YMU)
?
[Raw transfer]



ANP_K_6(3C41)
?
[Raw transfer]



ANP_J_5(3C41)
?
[Raw transfer]



AGS_B_6(3C4J)
?
[Raw transfer]



ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]



ACP_A_4(4AYT)
ABCBA_HUMAN
[Raw transfer]



ATP_A_6(4YMV)
?
[Raw transfer]



AGS_A_4(3C4J)
?
[Raw transfer]



ADP_A_5(2OLJ)
?
[Raw transfer]



POP_A_9(2D62)
?
[Raw transfer]



AT4_B_6(2OLK)
?
[Raw transfer]



ADP_A_5(2Q0H)
?
[Raw transfer]



AT4_D_8(2OLK)
?
[Raw transfer]



LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]



LMT_B_4(4MKI)
ECFA2_CALS4
[Raw transfer]
29 PsiBlast_CBE 91.7741% 0 - C- -3PUV - MALK_ECOLI -
28 PsiBlast_CBE 91.7741% 0 - C- -3PUW - MALK_ECOLI -
27 PsiBlast_CBE 91.7741% 0 - C- -3PUX - MALK_ECOLI -
17 PsiBlast_PDB 91.3741%-130 - C1 -4KI0 - MALK_ECOLI -
11 PsiBlast_PDB 91.0741%-134 - C1 -3PUV - MALK_ECOLI -
8 PsiBlast_PDB 90.4941%-132 - C1 -3PUY - MALK_ECOLI -
23 PsiBlast_CBE 90.4841%-126 - C1 -4KI0 - MALK_ECOLI -
19 PsiBlast_PDB 90.3541%-127 - C1 -2R6G - MALK_ECOLI (first) -
14 PsiBlast_PDB 90.3441%-134 - C1 -3RLF - MALK_ECOLI -
13 PsiBlast_PDB 90.3341%-131 - C1 -3PUX - MALK_ECOLI -
33 PsiBlast_CBE 90.2741%-131 - C1 -2AWN - MALK_ECOLI -
25 PsiBlast_CBE 89.8941%-134 - C1 -3PUZ - MALK_ECOLI -
9 PsiBlast_PDB 88.8341%-132 - C1 -3PUZ - MALK_ECOLI -
12 PsiBlast_PDB 88.7141%-133 - C1 -3PUW - MALK_ECOLI -
1 PsiBlast_PDB 88.1943%-120 - C1 -2IT1 - ? -
4 PsiBlast_PDB 88.1641%-134 - C1 -1Q1E - MALK_ECOLI -
26 PsiBlast_CBE 87.8641%-127 - C1 -3PUY - MALK_ECOLI -
15 PsiBlast_PDB 87.3441%-122 - C1 -4JBW - MALK_ECOLI -
24 PsiBlast_CBE 87.1841%-127 - C1 -3RLF - MALK_ECOLI -
36 PsiBlast_CBE 86.9341%-117 - C1 -1Q12 - MALK_ECOLI -
54 PsiBlast_CBE 73.9840% -48 - C1 -4YMV 6.2 ?
55 PsiBlast_CBE 73.0440% -41 - C1 -4YMU 5.9 ?
126 PsiBlast_CBE 65.2333% -4 - C1 -1B0U 6.1 HISP_SALTY