@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1773: (2018-01-19 )
MIELKQVSKSFGERELFSNLSMTFEAGKVYALIGSSGSGKTTLMNMIGKLEPYDGTIFYRGKDLANYKSSDFFRHELGYLFQNFGLIENQSIEENLKLGLIGQKLSRSEQRLRQKQALEQVGLVYLDLDKRIFELSGGESQRVALAKIILKNPPFILADEPTASIDPATSQLIMEILLSLRDDNRLIIIATHNPAIWEMADEVFTMDHLK

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_7(4YMU)
?
[Raw transfer]



ATP_A_6(4YMV)
?
[Raw transfer]



ANP_K_6(3C41)
?
[Raw transfer]



ATP_J_5(4YMU)
?
[Raw transfer]



ATP_J_5(4YMV)
?
[Raw transfer]



ANP_J_5(3C41)
?
[Raw transfer]



AGS_B_6(3C4J)
?
[Raw transfer]



AGS_A_4(3C4J)
?
[Raw transfer]



ADP_B_6(2Q0H)
?
[Raw transfer]



ADP_A_5(2OLJ)
?
[Raw transfer]



ADP_B_6(2OLJ)
?
[Raw transfer]



AT4_B_6(2OLK)
?
[Raw transfer]



ADP_A_5(2Q0H)
?
[Raw transfer]



AT4_A_5(2OLK)
?
[Raw transfer]



AT4_D_8(2OLK)
?
[Raw transfer]



AT4_C_7(2OLK)
?
[Raw transfer]



GOL_A_5(4P33)
LPTB_ECOLI
[Raw transfer]



GOL_B_11(4P33)
LPTB_ECOLI
[Raw transfer]



LMT_B_4(4MKI)
ECFA2_CALS4
[Raw transfer]



LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]



IPA_A_6(3TIF)
Y796_METJA
[Raw transfer]
2 PsiBlast_PDB 89.6032% 0 - C- -5NIL - ? -
1 PsiBlast_PDB 89.6032% 0 - C- -5NIK - ? -
16 PsiBlast_PDB 83.2132% -12 - C1 -4YMW - ? -
32 PsiBlast_CBE 82.9232% -11 - C1 -4YMU 7.3 ?
31 PsiBlast_CBE 82.6232% -15 - C1 -4YMV 5.6 ?
19 PsiBlast_PDB 82.3631% -58 - C1 -2OLJ 4.7 ?
14 PsiBlast_PDB 81.9832% -8 - C1 -4YMU 5.8 ?
12 PsiBlast_PDB 81.1732% -8 - C1 -4YMS - ? -
45 PsiBlast_CBE 80.6231% -54 - C1 -2OLK 5.2 ?
15 PsiBlast_PDB 80.5032% -8 - C1 -4YMV 5.7 ?
35 PsiBlast_CBE 80.4131% -57 - C1 -3C4J 4.8 ?
34 PsiBlast_CBE 80.3931% -51 - C1 -3C41 7.2 ?
36 PsiBlast_CBE 80.1131% -51 - C1 -3C4J 6.3 ?
13 PsiBlast_PDB 78.6932% -11 - C1 -4YMT - ? -
18 PsiBlast_PDB 77.8731% -54 - C1 -3C41 5.0 ?
38 PsiBlast_CBE 76.6031% -49 - C1 -2Q0H 5.1 ?
44 PsiBlast_CBE 76.3331% -50 - C1 -2OLK 4.5 ?
43 PsiBlast_CBE 76.1631% -51 - C1 -2OLK 6.1 ?
20 PsiBlast_PDB 75.8531% -52 - C1 -2OLK 4.8 ?
30 PsiBlast_CBE 74.2334% -80 - C1 -4HLU - ECFA1_THEMA -
37 PsiBlast_CBE 72.0931% -55 - C1 -2Q0H 5.8 ?
46 PsiBlast_CBE 70.7431% -43 - C1 -2OLJ 4.6 ?
64 PsiBlast_CBE 57.4831% -16 - C1 -4P33 2.7 LPTB_ECOLI