@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1812: (2018-01-20 )
MPKKILVLHTGGTISMQADASGAVVTSSDNPMNHVSNPLEGIQVHALDFFNLPSPHIKPKHMLVLYQKIKEEADNYDGVVITHGTDTLEETAYFLDTMEVPHMPIVLTGAMRSSNELGSDGVYNYLSALRVASDDRAADKGVLVVMNDEIHAAKYVTKTHTTNVSTFQTPTHGPLGLIMKQEILYFKTAEPRVRFDLDHIQGLVPIISAYAGMTDELIDMLDLEHLDGLIIQAFGAGNIPKETAQKLESLLQKGIPVALVSRCFNGIAEPVYAYQGGGVQLQKAGVFFVKELNAQKARLKLLIALNAGLTGQALKDYMEG

Atome Classification :

(45 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ASP_B_6(5K3O)
ASPG_WOLSU
[Raw transfer]




ASP_D_8(5K3O)
ASPG_WOLSU
[Raw transfer]




ASP_C_7(5K4G)
ASPG_WOLSU
[Raw transfer]




ASP_A_2(2WLT)
ASPG_HELPJ
[Raw transfer]




ASP_B_6(5K4G)
ASPG_WOLSU
[Raw transfer]




ASP_A_5(5K3O)
ASPG_WOLSU
[Raw transfer]




ASP_D_8(5K4G)
ASPG_WOLSU
[Raw transfer]




ASP_C_7(5K3O)
ASPG_WOLSU
[Raw transfer]




ASP_A_2(2WLT)
ASPG_HELPJ
[Raw transfer]




ASP_A_5(5K4G)
ASPG_WOLSU
[Raw transfer]




ASP_B_6(5K4G)
ASPG_WOLSU
[Raw transfer]




GLU_A_5(5K45)
ASPG_WOLSU
[Raw transfer]




ASP_A_2(2WT4)
ASPG_HELPJ
[Raw transfer]




GLU_D_8(5K45)
ASPG_WOLSU
[Raw transfer]




GLU_B_6(5K45)
ASPG_WOLSU
[Raw transfer]




CAB_A_7(1DJO)
ASPQ_PSES7
[Raw transfer]




SIN_D_8(1HG0)
ASPG_DICCH
[Raw transfer]




GLU_C_7(5K45)
ASPG_WOLSU
[Raw transfer]




CAB_B_5(1DJO)
ASPQ_PSES7
[Raw transfer]




ASP_E_5(1NNS)
ASPG2_ECOLI
[Raw transfer]




ASP_E_5(1HO3)
ASPG2_ECOLI
[Raw transfer]




ASP_H_8(3ECA)
ASPG2_ECOLI
[Raw transfer]




ASP_F_6(3ECA)
ASPG2_ECOLI
[Raw transfer]




ASP_G_7(1NNS)
ASPG2_ECOLI
[Raw transfer]




GLU_B_6(1HFW)
ASPG_DICCH
[Raw transfer]




GLU_C_7(1HFW)
ASPG_DICCH
[Raw transfer]




ASP_G_7(3ECA)
ASPG2_ECOLI
[Raw transfer]




ASP_E_5(1NNS)
ASPG2_ECOLI
[Raw transfer]




GLU_A_5(1HFW)
ASPG_DICCH
[Raw transfer]




DO2_B_7(1DJP)
ASPQ_PSES7
[Raw transfer]




DO2_A_5(1DJP)
ASPQ_PSES7
[Raw transfer]




GOL_A_8(5CBP)
?
[Raw transfer]




DAS_B_6(1HG1)
ASPG_DICCH
[Raw transfer]




ASP_G_7(1HO3)
ASPG2_ECOLI
[Raw transfer]




DAS_C_7(1HG1)
ASPG_DICCH
[Raw transfer]




DAS_D_8(1HG1)
ASPG_DICCH
[Raw transfer]




ASP_G_7(1HO3)
ASPG2_ECOLI
[Raw transfer]




ASP_E_5(3ECA)
ASPG2_ECOLI
[Raw transfer]




ASP_E_5(3ECA)
ASPG2_ECOLI
[Raw transfer]




13 PsiBlast_PDB 85.3232% -56 - C7 -1HFW 3.3 ASPG_DICCH
40 PsiBlast_CBE 85.1032% -54 - C7 -1HG1 3.1 ASPG_DICCH
44 PsiBlast_CBE 84.1132% -56 - C7 -1HFW 3.5 ASPG_DICCH
57 PsiBlast_CBE 83.7133% -36 - C7 -5K4H - ASPG_WOLSU -
4 PsiBlast_PDB 82.6335% -48 - C7 -4ECA - ASPG2_ECOLI -
49 PsiBlast_CBE 81.8231% -53 - C7 -5HW0 - ASPG_DICCH -
5 PsiBlast_PDB 79.1337% -39 - C7 -1IHD - ASPG2_ECOLI -
7 PsiBlast_PDB 78.9937% -46 - C- -1JJA - ASPG2_ECOLI -
21 PsiBlast_CBE 78.3437% -42 - C7 -3ECA 3.9 ASPG2_ECOLI
22 PsiBlast_CBE 78.2737% -40 - C7 -3ECA 2.9 ASPG2_ECOLI
3 PsiBlast_PDB 78.2437% -38 - C7 -1HO3 3.9 ASPG2_ECOLI
6 PsiBlast_PDB 78.1737% -36 - C7 -1JAZ - ASPG2_ECOLI -
60 PsiBlast_CBE 78.0333% 14 - C7 -5K4G 2.2 ASPG_WOLSU
54 PsiBlast_CBE 77.9333% 11 - C7 -5K4H - ASPG_WOLSU -
17 PsiBlast_PDB 77.8933% 14 - C7 -5K4G 2.9 ASPG_WOLSU
1 PsiBlast_PDB 77.8837% -40 - C7 -3ECA 2.7 ASPG2_ECOLI
53 PsiBlast_CBE 77.8333% 17 - C7 -5K4H - ASPG_WOLSU -
61 PsiBlast_CBE 77.6533% 14 - C7 -5K4G 2.8 ASPG_WOLSU
59 PsiBlast_CBE 77.3233% 16 - C7 -5K4G 3.0 ASPG_WOLSU
68 PsiBlast_CBE 77.1932% -13 - C7 -2WT4 3.1 ASPG_HELPJ
25 PsiBlast_CBE 77.0937% -40 - C7 -1HO3 3.6 ASPG2_ECOLI
102 Fugue 76.9835% 42 - C7 -3ECA 3.0 ASPG2_ECOLI
23 PsiBlast_CBE 76.8837% -39 - C7 -3ECA 4.0 ASPG2_ECOLI
2 PsiBlast_PDB 76.6837% -39 - C7 -1NNS 2.8 ASPG2_ECOLI
24 PsiBlast_CBE 76.6637% -37 - C7 -1NNS 4.4 ASPG2_ECOLI
69 PsiBlast_CBE 76.4132% -9 - C7 -2WLT 3.4 ASPG_HELPJ
45 PsiBlast_CBE 76.3032% -1 - C7 -1HFW 2.6 ASPG_DICCH
38 PsiBlast_CBE 76.0432% 9 - C7 -1HG1 2.4 ASPG_DICCH
88 HHSearch 74.9735% 35 - C7 -1HO3 3.7 ASPG2_ECOLI
80 PsiBlast_CBE 74.7831% -22 - C7 -1DJO 2.1 ASPQ_PSES7
86 HHSearch 74.5632% 28 - C7 -5K4G 2.8 ASPG_WOLSU
81 PsiBlast_CBE 74.4131% -18 - C7 -1DJO 3.9 ASPQ_PSES7
75 PsiBlast_CBE 74.2233% 21 - C7 -5K3O 4.1 ASPG_WOLSU
78 PsiBlast_CBE 73.9331% -21 - C7 -1DJP 2.9 ASPQ_PSES7
84 HHSearch 73.7735% 40 - C7 -1NNS 3.1 ASPG2_ECOLI
79 PsiBlast_CBE 73.5331% -19 - C7 -1DJP 4.0 ASPQ_PSES7
71 PsiBlast_CBE 73.4633% 20 - C7 -5K45 3.3 ASPG_WOLSU
77 PsiBlast_CBE 73.2133% 21 - C7 -5K3O 3.0 ASPG_WOLSU
73 PsiBlast_CBE 73.1933% 21 - C7 -5K45 4.3 ASPG_WOLSU
76 PsiBlast_CBE 73.1033% 21 - C7 -5K3O 4.0 ASPG_WOLSU
72 PsiBlast_CBE 73.0433% 21 - C7 -5K45 3.2 ASPG_WOLSU
74 PsiBlast_CBE 72.8533% 19 * C7 *5K3O 4.0 ASPG_WOLSU
87 HHSearch 72.6733% 32 - C7 -2WLT 3.1 ASPG_HELPJ
70 PsiBlast_CBE 72.4233% 20 - C7 -5K45 3.0 ASPG_WOLSU
39 PsiBlast_CBE 71.5532% 27 - C7 -1HG1 4.3 ASPG_DICCH