@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1952: (2018-01-23 )
MFERGNCTMIYSKEIVREWLDEVAERAKDHPEWVDVFEHCYTDTLDNTVEILEDGSTFVLTGDIPAMWLRDSTAQLRPYLHVAKRDALLRQTIAGLVKRQMTLVLKDPYANSFNIEENWKGHHETDHTDLNGWIWERKYEVDSLCYPLQLAYLLWKETGETSQFDETFVAATKEILHLWTVEQDHKNSPYRFVRDTDRKEDTLVNDGFGPDFAVTGMTWSAFRPSDDCCQYSYLIPSNMFAVVVLGYVQEIFAALNLADSQSVIADAKRLQDEIQEGIENYAYTTNSKGEKIYAFEVDGLGNASIMDDPNVPSLLAAPYLGYCSIDDEVYQATRRTILSSENPYFYQGEYASGLGSSHTFYRYIWPIALSIQGLTTRDKAEKKFLLDQLVACDGGTGVMHESFHVDDPTLYSREWFSWANMMFCELVLDYLDIR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

YDR_A_8(3QT9)
?
[Raw transfer]



DMJ_A_10(3QRY)
?
[Raw transfer]



DMJ_A_10(3QRY)
?
[Raw transfer]



DMJ_B_3(3QRY)
?
[Raw transfer]



MAN_A_2(5M7I)
?
[Raw transfer]



MAN_A_2(5M7Y)
?
[Raw transfer]



EDO_B_15(3ON6)
?
[Raw transfer]



EDO_A_9(3ON6)
?
[Raw transfer]



BMA_A_3(5M7I)
?
[Raw transfer]



EDO_A_2(3QT3)
?
[Raw transfer]



EDO_A_2(3QT3)
?
[Raw transfer]



SUGAR_B_8(3QSP)
?
[Raw transfer]
-
SUGAR_A_3(3QSP)
?
[Raw transfer]
-
EDO_A_3(3P2C)
?
[Raw transfer]



EDO_A_3(3P2C)
?
[Raw transfer]



MAN_A_4(5M7Y)
?
[Raw transfer]



MAN_A_4(5M7Y)
?
[Raw transfer]
23 PsiBlast_CBE 96.6898%-108 - C3 -3QPF - ? -
38 HHSearch 96.6499%-107 - C3 -3QRY 4.2 ?
1 PsiBlast_PDB 96.6498%-106 - C3 -3QPF - ? -
22 PsiBlast_CBE 96.4398%-107 - C3 -3QRY 4.2 ?
2 PsiBlast_PDB 95.8998%-108 - C3 -3QRY 3.6 ?
21 PsiBlast_CBE 95.8498%-105 - C3 -3QSP 2.7 ?
3 PsiBlast_PDB 95.4298%-105 - C3 -3QSP 3.5 ?
37 HHSearch 73.3646% -37 - C3 -3QT3 2.4 ?
36 HHSearch 72.7746% -27 * C3 *5M7Y 2.7 ?
7 PsiBlast_PDB 72.4846% -31 - C3 -3QT9 6.6 ?
5 PsiBlast_PDB 72.4646% -34 - C3 -5M7Y 4.5 ?
8 PsiBlast_PDB 72.1045% -34 - C3 -2NVP - ? -
4 PsiBlast_PDB 72.0446% -33 - C3 -5M7I 4.2 ?
6 PsiBlast_PDB 71.9746% -35 - C3 -3QT3 2.4 ?
34 HHSearch 69.6341% -18 - C3 -3ON6 2.5 ?
35 HHSearch 67.5241% 3 - C3 -3P2C 2.8 ?
10 PsiBlast_PDB 67.3642% -18 - C3 -2P0V - ? -
9 PsiBlast_PDB 66.1342% -12 - C3 -3ON6 3.6 ?
11 PsiBlast_PDB 64.1943% 2 - C3 -3P2C 2.8 ?
47 HHSearch 40.1013% -31 - C3 -1ULV - ? -