@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1957: (2018-01-23 )
MTNSVFQGRSFLAEKDFTRAELEYLIGLSAHLKDLKKRNIQHHYLAGKNIALLFEKTSTRTRAAFTTAAIDLGAHPEYLGANDIQLGKKESTEDTAKVLGRMFDGIEFRGFSQRMVEELAEFSGVPVWNGLTDEWHPTQMLADYLTVQENFGRLEGLTLVYCGDGRNNVANSLLVTGAILGVNVHIFSPKELFPEKEIVELAEGFAKESGAHVLITEDADEAVKDADVLYTDVWVSMGEEDKFAERVALLKPYQVNMDLVKKAGNENLIFLHCLPAFHDTHTVYGKDVAEKFGVEEMEVTDEVFRSKYARHFDQAENRMHTIKAVMAATLGNLYIPKV

Atome Classification :

(44 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PSQ_D_4(1DUV)
OTC1_ECOLI
[Raw transfer]



PSQ_F_6(1DUV)
OTC1_ECOLI
[Raw transfer]



PSQ_E_5(1DUV)
OTC1_ECOLI
[Raw transfer]



PSQ_E_5(1DUV)
OTC1_ECOLI
[Raw transfer]



PAO_D_4(1OTH)
OTC_HUMAN
[Raw transfer]



CP_A_4(4JFR)
OTC_VIBVU
[Raw transfer]



PUW_B_9(4A8H)
PTC_ENTFA
[Raw transfer]



PUW_A_3(4A8H)
PTC_ENTFA
[Raw transfer]



CP_A_5(4H31)
OTC_VIBVU
[Raw transfer]



CP_C_13(2I6U)
OTC_MYCTU
[Raw transfer]



CIR_C_16(4JQO)
OTC_VIBVU
[Raw transfer]



CP_G_7(1C9Y)
OTC_HUMAN
[Raw transfer]



CP_C_13(2I6U)
OTC_MYCTU
[Raw transfer]



PAO_A_2(4A8T)
PTC_ENTFA
[Raw transfer]



CP_A_4(4NF2)
OTC_BACAN
[Raw transfer]



CIR_A_5(4JQO)
OTC_VIBVU
[Raw transfer]



CP_C_12(4NF2)
OTC_BACAN
[Raw transfer]



CIR_B_11(4JQO)
OTC_VIBVU
[Raw transfer]



CP_D_4(1EP9)
OTC_HUMAN
[Raw transfer]



CP_B_6(4JFR)
OTC_VIBVU
[Raw transfer]



CP_A_4(4NF2)
OTC_BACAN
[Raw transfer]



CP_A_9(2I6U)
OTC_MYCTU
[Raw transfer]



CP_B_10(4NF2)
OTC_BACAN
[Raw transfer]



CP_B_11(2I6U)
OTC_MYCTU
[Raw transfer]



CP_J_10(1FVO)
OTC_HUMAN
[Raw transfer]



PA9_A_2(3M4N)
AOTC_XANCP
[Raw transfer]



PA9_A_2(3M5C)
AOTC_XANCP
[Raw transfer]



CP_G_7(1FVO)
OTC_HUMAN
[Raw transfer]



PAL_C_8(1F1B)
PYRB_ECOLI
[Raw transfer]



PAL_A_7(1F1B)
PYRB_ECOLI
[Raw transfer]



ARG_A_6(4JHX)
OTC_VIBVU
[Raw transfer]



PE5_B_26(4H31)
OTC_VIBVU
[Raw transfer]
123 HHSearch 95.4373% -67 - C7 -2W37 - OTCC_LACHI -
1 PsiBlast_PDB 93.7372% -67 - C7 -2W37 - OTCC_LACHI -
125 HHSearch 83.3352%-106 * C7 *1VLV - OTC_THEMA -
12 PsiBlast_PDB 81.8050%-106 - C7 -1VLV - OTC_THEMA -
42 PsiBlast_CBE 80.9354% -33 - C7 -2OTC - OTC1_ECOLI -
8 PsiBlast_PDB 80.7054% -33 - C7 -1DUV 6.9 OTC1_ECOLI
33 PsiBlast_CBE 80.5854% -33 - C7 -1DUV 6.7 OTC1_ECOLI
36 PsiBlast_CBE 80.5754% -33 - C7 -2OTC - OTC1_ECOLI -
34 PsiBlast_CBE 80.5354% -31 - C7 -1DUV 6.8 OTC1_ECOLI
130 HHSearch 80.2444%-105 - C7 -1A1S - OTCA_PYRFU -
41 PsiBlast_CBE 80.0854% -33 - C7 -2OTC - OTC1_ECOLI -
9 PsiBlast_PDB 80.0754% -33 - C7 -2OTC - OTC1_ECOLI -
39 PsiBlast_CBE 79.9654% -33 - C7 -2OTC - OTC1_ECOLI -
35 PsiBlast_CBE 79.9454% -33 - C7 -2OTC - OTC1_ECOLI -
37 PsiBlast_CBE 79.9054% -33 - C7 -2OTC - OTC1_ECOLI -
38 PsiBlast_CBE 79.8454% -33 - C7 -2OTC - OTC1_ECOLI -
40 PsiBlast_CBE 79.7254% -33 - C7 -2OTC - OTC1_ECOLI -
29 PsiBlast_CBE 79.4354% -30 - C7 -4JFR - OTC_VIBVU -
16 PsiBlast_PDB 79.1542%-103 - C7 -1A1S - OTCA_PYRFU -
5 PsiBlast_PDB 79.0654% -25 - C7 -4JHX 2.8 OTC_VIBVU
124 HHSearch 78.9454% -24 - C7 -1DUV 6.8 OTC1_ECOLI
4 PsiBlast_PDB 78.8354% -23 - C7 -4JFR 4.7 OTC_VIBVU
26 PsiBlast_CBE 78.6454% -23 - C7 -4JQO 3.7 OTC_VIBVU
30 PsiBlast_CBE 78.4854% -24 - C7 -4JFR 4.4 OTC_VIBVU
25 PsiBlast_CBE 78.3354% -23 - C7 -4JQO 3.7 OTC_VIBVU
32 PsiBlast_CBE 78.3054% -22 - C7 -4H31 2.4 OTC_VIBVU
3 PsiBlast_PDB 78.1354% -27 - C7 -4H31 5.0 OTC_VIBVU
6 PsiBlast_PDB 77.9754% -23 - C7 -4JQO 3.8 OTC_VIBVU
137 HHSearch 77.2642%-104 - C7 -4NF2 4.9 OTC_BACAN
45 PsiBlast_CBE 75.7040%-104 - C7 -4NF2 5.0 OTC_BACAN
47 PsiBlast_CBE 75.0740%-104 - C7 -4NF2 4.9 OTC_BACAN
46 PsiBlast_CBE 74.9840%-104 - C7 -4NF2 4.9 OTC_BACAN
19 PsiBlast_PDB 71.1840% -24 - C7 -1EP9 5.0 OTC_HUMAN
18 PsiBlast_PDB 71.1640% -21 - C7 -1C9Y 4.8 OTC_HUMAN
17 PsiBlast_PDB 71.0940% -22 - C7 -1OTH 7.4 OTC_HUMAN
20 PsiBlast_PDB 70.6340% -25 - C7 -1FVO 3.8 OTC_HUMAN
43 PsiBlast_CBE 70.3340% -22 - C7 -1FVO 3.8 OTC_HUMAN
70 PsiBlast_CBE 66.5535% -28 - C7 -4A8H 6.0 PTC_ENTFA
136 HHSearch 66.2041% -16 - C7 -2I6U 4.3 OTC_MYCTU
69 PsiBlast_CBE 65.5135% -28 - C7 -4A8H 6.0 PTC_ENTFA
53 PsiBlast_CBE 64.7138% -18 - C7 -2I6U 4.4 OTC_MYCTU
52 PsiBlast_CBE 63.8038% -11 - C7 -2I6U 4.3 OTC_MYCTU
54 PsiBlast_CBE 62.6038% -15 - C7 -2I6U 4.1 OTC_MYCTU
62 PsiBlast_CBE 61.2435% 19 - C7 -4A8T 5.8 PTC_ENTFA