@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr2026: (2018-01-25 )
MKSIIDVKNLSFRYKENQNYYDVKDITFHVKRGEWLSIVGHNGSGKSTTVRLIDGLLEAESGEIVIDGQRLTEENVWNIRRQIGMVFQNPDNQFVGATVEDDVAFGLENQGLSRQEMKKRVEEALALVGMLDFKKREPARLSGGQKQRVAIAGVVALRPAILILDEATSMLDPEGRRELIGTVKGIRKDYDMTVISITHDLEEVAMSDRVLVMKKGEIESTSSPRELFSRNDLDQIGLDDPFANQLKKSLSQNGYDLPENYLTESELEDKLWELL

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_F_6(2FGK)
HLYBP_ECOLX
[Raw transfer]



ATP_H_8(2FGK)

[Raw transfer]



ATP_H_8(2FGJ)

[Raw transfer]



ATP_G_7(2FGK)
HLYBP_ECOLX
[Raw transfer]



ATP_E_5(2FGK)
HLYBP_ECOLX
[Raw transfer]



12D_A_2(3B5J)

[Raw transfer]



128_A_2(2PMK)

[Raw transfer]



ATP_A_9(1XEF)
HLYBP_ECOLX
[Raw transfer]



ANP_J_5(3C41)
?
[Raw transfer]



ADP_C_11(4HLU)
ECFA1_THEMA
[Raw transfer]



ADP_B_2(2FFA)

[Raw transfer]



ADP_B_2(2FF7)

[Raw transfer]



ANP_K_6(3C41)
?
[Raw transfer]



LMT_B_4(4MKI)
ECFA2_CALS4
[Raw transfer]



LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]
1 PsiBlast_PDB 84.1355% - - C1 -4HUQ - ECFA1_LACBA -
3 PsiBlast_PDB 83.8855% - - C1 -4RFS - ECFA1_LACBA -
129 HHSearch 82.0455% - - C1 -4HUQ - ECFA1_LACBA -
130 HHSearch 81.7755% - - C1 -4RFS - ECFA1_LACBA -
2 PsiBlast_PDB 81.6855% - - C1 -4HZU - ECFA1_LACBA -
5 PsiBlast_PDB 73.2348% 13 - C1 -5JSZ - ECFA1_LACDA -
21 PsiBlast_CBE 72.8148% 11 - C1 -5D3M - ECFA1_LACDA -
4 PsiBlast_PDB 72.7648% 14 - C1 -5D3M - ECFA1_LACDA -
146 HHSearch 72.5549% 20 - C1 -5D3M - ECFA1_LACDA -
138 HHSearch 72.1849% 16 - C1 -5JSZ - ECFA1_LACDA -
24 PsiBlast_CBE 69.9139%-126 - C1 -4HLU 5.9 ECFA1_THEMA
22 PsiBlast_CBE 68.4642% 50 - C1 -4MKI 2.6 ECFA2_CALS4
6 PsiBlast_PDB 68.3242% 50 - C1 -4MKI 2.7 ECFA2_CALS4
7 PsiBlast_PDB 67.1236% -23 - C1 -5X3X - CBIO_RHOCB -
23 PsiBlast_CBE 65.2635% -26 - C1 -5X40 - CBIO_RHOCB -
126 Fugue 65.0631% -76 - C1 -1Z47 - ? -
9 PsiBlast_PDB 64.9435% -20 - C1 -5X40 - CBIO_RHOCB -
11 PsiBlast_PDB 64.7934% 23 - C1 -3TUI - METN_ECOLI -
12 PsiBlast_PDB 64.7834% 24 - C1 -3TUZ - METN_ECOLI -
28 PsiBlast_CBE 64.2534% 21 - C1 -3TUI - METN_ECOLI -
70 PsiBlast_CBE 56.4336% -39 - C1 -2FGJ 7.6
78 PsiBlast_CBE 55.4036% -52 - C1 -1XEF 5.7 HLYBP_ECOLX
74 PsiBlast_CBE 55.2336% -51 - C1 -2FFA 6.9
49 PsiBlast_CBE 54.9436% -49 - C1 -2FGK 7.0
51 PsiBlast_CBE 54.8136% -48 - C1 -2FGK 6.4 HLYBP_ECOLX
48 PsiBlast_CBE 54.6137% -49 - C1 -3B5J 6.1
46 PsiBlast_CBE 54.6037% -51 - C1 -2FF7 6.9
52 PsiBlast_CBE 54.2236% -46 - C1 -2FGK 6.1 HLYBP_ECOLX
50 PsiBlast_CBE 53.9536% -42 - C1 -2FGK 7.4 HLYBP_ECOLX
69 PsiBlast_CBE 49.0637% -16 - C1 -3C41 4.7 ?