@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VL14: (2017-10-30 )
MILFGKKKVKPSQKAYAVVTGAGSGIGRSFAIELAKRGGSVVCADINLEAAEETVTLLEQQGAKAFAMHCDVGDPEHVTNLAETAEILLSHPVTLVINNAGVGLGGKFDELSLEDWNWVMNINLWGVIHGCHAFVPKFKKLGYGAIINVASAASYTAAPEMTAYNVTKAGVRALSETLSAELRKFNIKVNVLCPTLVPTNIIKNGRIPGRYSKLADHALMNYALTTSDDVAKLTLNRLDQDELYTIPQIDAKLFWLMKRASPSLYTKFLGTSYKLFK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_C_8(5IG2)
?
[Raw transfer]



NAD_B_6(5IG2)
?
[Raw transfer]



1PS_B_6(4URE)
?
[Raw transfer]
22 PsiBlast_CBE 83.9636% -72 - C1 -5IG2 11.7 ?
21 PsiBlast_CBE 83.0636% -73 - C1 -5IG2 11.9 ?
116 HHSearch 81.3634% -70 - C1 -5IG2 - ? -
2 PsiBlast_PDB 81.3036% -73 - C1 -5IG2 - ? -
115 HHSearch 79.8734% -70 - C1 -5IG2 - ? -
1 PsiBlast_PDB 79.7836% -86 - C1 -3TJR - ? -
29 PsiBlast_CBE 79.1635% 0 - C- -1GEG - BUDC_KLEPN -
28 PsiBlast_CBE 79.1635% 0 - C- -1GEG - BUDC_KLEPN -
27 PsiBlast_CBE 79.1635% 0 - C- -1GEG - BUDC_KLEPN -
26 PsiBlast_CBE 79.1635% 0 - C- -1GEG - BUDC_KLEPN -
25 PsiBlast_CBE 79.1635% 0 - C- -1GEG - BUDC_KLEPN -
24 PsiBlast_CBE 79.1635% 0 - C- -1GEG - BUDC_KLEPN -
23 PsiBlast_CBE 79.1635% 0 - C- -1GEG - BUDC_KLEPN -
3 PsiBlast_PDB 79.1635% 0 - C- -1GEG - BUDC_KLEPN -
34 PsiBlast_CBE 74.5832%-124 - C1 -1FMC - HDHA_ECOLI -
9 PsiBlast_PDB 74.1532%-123 - C1 -1AHI - HDHA_ECOLI -
11 PsiBlast_PDB 73.8732%-119 - C1 -1FMC - HDHA_ECOLI -
4 PsiBlast_PDB 73.6434% -77 - C1 -4URE - ? -
35 PsiBlast_CBE 73.4832%-123 - C1 -1AHI - HDHA_ECOLI -
5 PsiBlast_PDB 73.3134% -74 - C1 -4URF - ? -