@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VMK6: (2017-11-08 )
MIQFDQVSLRRGGRVLFQKASMQLHPGWKIGLTGVNGAGKSTLFAALLGSLGADEGSLTRPSVWTVAHMAQEVKALDMPAIDFVLSGDEEYWDIQNKLAQPEQLTDSDLAKLHGRFDEIHGYSAPSKAAQLMAGLGFLEHQLRLNVASFSGGWRMRLNLARTLMSRSDLLLLDEPTNHLDLDAILWLEDWLKAYEGTLILISHDRDFLDAITDHILHIENQELTLYTGNYSTFETTRSERLAQQQQAFEKQQEARAHLQKFIDRFKAKATKARQAQSRIKQLERMQQLAPAHVDTPFTFSFREPTKMSSPLLTLENASIGYGDKKIAEKIKLQITPNSRIGLLGMNGAGKSTLIKSLVGDLPLLAGERKASELLNIGYFAQHQMDALDGQASPMLQLARIADKQISEATLRSFLGSFGFSGERMDTPCESFSGGERARLALALIVWQRPNVLILDEPTNHLDLDMRHALSMALQDFEGAVVLVSHERQLIASVCDELLLVHGGKCTEFEGDLQDYAKWLREARQQQINAQTAVAQNNSSSAAPAPAKVDKEAQRKEAARRREQTRPIRKNIEKVESQIEKLQPRLAEIEEALADTSLYEANRKDDLLKLMNEQTELKAKLEQYEEQLLELMMELEEMEASFEN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_6(3BK7)
?
[Raw transfer]



ADP_B_3(3J15)
?
[Raw transfer]
41 HHSearch 81.1231% -2 - C1 -2IW3 - EF3A_YEAST -
47 HHSearch 74.0831% -12 - C1 -2IX8 - -
2 PsiBlast_PDB 73.3531% 2 - C1 -4FIN - ETTA_ECOLI -
1 PsiBlast_PDB 70.1331% 34 - C1 -3J5S - ETTA_ECOLI -
3 PsiBlast_PDB 65.6126% -5 - C1 -2IWH - EF3A_YEAST -
4 PsiBlast_PDB 64.9026% -3 - C1 -2IX3 - EF3A_YEAST -
34 HHSearch 63.7727% 36 - C1 -3J5S - ETTA_ECOLI -
8 PsiBlast_PDB 61.2323% 18 - C1 -3J15 3.5 ?
7 PsiBlast_PDB 61.0323% 13 - C1 -3BK7 5.7 ?
9 PsiBlast_PDB 60.3623% 19 - C1 -5LW7 - ? -
55 HHSearch 58.7122% 5 - C1 -1YQT - ? -
6 PsiBlast_PDB 57.6328% -13 - C1 -2IW3 - EF3A_YEAST -
50 HHSearch 57.4719% -0 - C1 -4CRM - RLI1_YEAST -
10 PsiBlast_PDB 57.0723% 5 - C1 -1YQT - ? -
5 PsiBlast_PDB 56.5728% -14 - C1 -2IX8 - -
27 Fugue 55.3820% 40 - C1 -3J16 - RLI1_YEAST -
12 PsiBlast_PDB 53.3721% 4 - C1 -4CRM - RLI1_YEAST -
11 PsiBlast_PDB 53.0721% 4 - C1 -3J16 - RLI1_YEAST -
60 HHSearch 52.5923% -43 - C1 -4YER - ? -
57 HHSearch 51.1422% -60 * C1 *3RLF - MALK_ECOLI -