@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VRF2: (2017-12-02 )
MIDYTQFPDANGHFGIHGGRFVSETLMAALEDLENLYSRMKNDEQFLAEFDRDLAYYVGRPSPLYYAERWSKELGGAQIYLKREDLNHTGSHKVNNTIGQALLAKLSGKKRIIAETGAGQHGVATATIAARLGLECVVYMGAEDVKRQAMNVYRMRLLGATVVPVQSGSKTLKDAMNEAMRDWVTNVDTTYYVIGTVAGPHPYPQLVRDFQSIIGREARKQILEQAGRLPDALVACVGGGSNAMGLFYPFLNDASVKMYGVEAAGFGIETGKHSAPLNAGHVGVLHGNRTYLMSDEQGQIIETHSISAGLDYPGVGPEHSFLKDMKRVEYVPINDTGALQGFRDLTKIEGIIPALESSHAMAYVSKLAPTMSKDQIIIATVSGRGDKDLMTVARIDGVEMVEM

Atome Classification :

(65 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

1D0_B_5(4HPJ)
TRPB_SALTY
[Raw transfer]




AQ3_B_8(4KKX)
TRPB_SALTY
[Raw transfer]




PLS_B_4(2CLM)
TRPB_SALTY
[Raw transfer]




7MN_B_4(3PR2)
TRPB_SALTY
[Raw transfer]




7MN_B_4(3PR2)
TRPB_SALTY
[Raw transfer]




0JO_B_8(4HPX)
TRPB_SALTY
[Raw transfer]




PLS_B_5(2TRS)
TRPB_SALTY
[Raw transfer]




PLS_B_4(1KFJ)
TRPB_SALTY
[Raw transfer]




PLS_B_4(2CLO)
TRPB_SALTY
[Raw transfer]




0JO_B_4(4HN4)
TRPB_SALTY
[Raw transfer]




PLS_B_5(2TSY)
TRPB_SALTY
[Raw transfer]




PLT_B_4(2TYS)
TRPB_SALTY
[Raw transfer]




PLS_B_9(1BEU)
TRPB_SALTY
[Raw transfer]




PLT_B_4(2TYS)
TRPB_SALTY
[Raw transfer]




GOL_A_7(4NEG)
TRPB_BACAN
[Raw transfer]




PLP_D_9(5EY5)
?
[Raw transfer]




GOL_A_7(4NEG)
TRPB_BACAN
[Raw transfer]




PLP_B_6(5EY5)
?
[Raw transfer]




PLP_B_5(1A5S)
TRPB_SALTY
[Raw transfer]




PLP_B_6(5EY5)
?
[Raw transfer]




PLP_B_4(4XUG)
TRPB_SALTY
[Raw transfer]




PLP_B_5(1UBS)
TRPB_SALTY
[Raw transfer]




PLP_B_4(5BW6)
TRPB_SALTY
[Raw transfer]




PLP_B_5(1KFC)
TRPB_SALTY
[Raw transfer]




PLP_B_4(1K8X)
TRPB_SALTY
[Raw transfer]




PLP_B_5(5CGQ)
TRPB_SALTY
[Raw transfer]




PLP_B_7(1A5A)
TRPB_SALTY
[Raw transfer]




PLP_B_5(5CGQ)
TRPB_SALTY
[Raw transfer]




PLP_B_4(1KFK)
TRPB_SALTY
[Raw transfer]




PLP_B_5(2RH9)
TRPB_SALTY
[Raw transfer]




PLP_B_5(2CLH)
TRPB_SALTY
[Raw transfer]




PLP_B_9(1A5B)
TRPB_SALTY
[Raw transfer]




PLP_B_12(4HT3)
TRPB_SALTY
[Raw transfer]




PLP_B_6(1TTQ)
TRPB_SALTY
[Raw transfer]




PLP_B_5(1CX9)
TRPB_SALTY
[Raw transfer]




PLP_B_5(2CLE)
TRPB_SALTY
[Raw transfer]




PLP_B_4(2WSY)
TRPB_SALTY
[Raw transfer]




PLP_B_5(1TTP)
TRPB_SALTY
[Raw transfer]




PLP_B_4(1BKS)
TRPB_SALTY
[Raw transfer]




PLP_B_4(1A50)
TRPB_SALTY
[Raw transfer]




PLP_B_4(1C29)
TRPB_SALTY
[Raw transfer]




PLP_B_5(1C8V)
TRPB_SALTY
[Raw transfer]




PLP_B_4(1C9D)
TRPB_SALTY
[Raw transfer]




F6F_B_9(4ZQC)
TRPB_SALTY
[Raw transfer]




PLP_B_4(1CW2)
TRPB_SALTY
[Raw transfer]




F6F_B_8(4WX2)
TRPB_SALTY
[Raw transfer]




F6F_B_5(4Y6G)
TRPB_SALTY
[Raw transfer]




EDO_B_13(4HT3)
TRPB_SALTY
[Raw transfer]




EDO_B_6(4XUG)
TRPB_SALTY
[Raw transfer]




F6F_B_4(2CLF)
TRPB_SALTY
[Raw transfer]




DMS_B_16(4ZQC)
TRPB_SALTY
[Raw transfer]




21 PsiBlast_CBE 89.7970% -65 - C1 -5EY5 5.6 ?
137 HHSearch 89.4171% -61 - C1 -5EY5 4.5 ?
1 PsiBlast_PDB 89.1070% -61 - C1 -5EY5 4.5 ?
138 HHSearch 87.7463% -66 * C1 *5IXJ - TRPB1_PYRFU -
7 PsiBlast_PDB 87.6263% -66 - C1 -5IXJ - TRPB1_PYRFU -
6 PsiBlast_PDB 87.4663% -66 - C1 -5DVZ - TRPB1_PYRFU -
40 PsiBlast_CBE 87.4463% -65 - C1 -5IXJ - TRPB1_PYRFU -
31 PsiBlast_CBE 87.1263% -66 - C1 -1WDW - TRPB1_PYRFU -
136 HHSearch 87.1163% -64 - C1 -1WDW - TRPB1_PYRFU -
24 PsiBlast_CBE 87.1163% -65 - C1 -1V8Z - TRPB1_PYRFU -
37 PsiBlast_CBE 87.0363% -65 - C1 -5T6M - TRPB1_PYRFU -
39 PsiBlast_CBE 87.0163% -67 - C1 -5IXJ - TRPB1_PYRFU -
9 PsiBlast_PDB 86.9963% -64 - C1 -1WDW - TRPB1_PYRFU -
49 PsiBlast_CBE 86.7263% -64 - C1 -5DW3 - TRPB1_PYRFU -
48 PsiBlast_CBE 86.5363% -64 - C1 -5DW3 - TRPB1_PYRFU -
32 PsiBlast_CBE 86.5163% -65 - C1 -1WDW - TRPB1_PYRFU -
27 PsiBlast_CBE 86.5163% -62 - C1 -5DW0 - TRPB1_PYRFU -
2 PsiBlast_PDB 86.4763% -63 - C1 -1V8Z - TRPB1_PYRFU -
23 PsiBlast_CBE 86.4663% -63 - C1 -1V8Z - TRPB1_PYRFU -
29 PsiBlast_CBE 86.4563% -66 - C1 -1WDW - TRPB1_PYRFU -
82 PsiBlast_CBE 83.6754% -61 - C1 -1A5A 5.3 TRPB_SALTY
119 PsiBlast_CBE 83.3953% -60 - C1 -1K8X 5.1 TRPB_SALTY
107 PsiBlast_CBE 83.2953% -61 - C1 -4Y6G 5.9 TRPB_SALTY
80 PsiBlast_CBE 83.1654% -60 - C1 -1BEU 6.6 TRPB_SALTY
118 PsiBlast_CBE 82.9653% -59 - C1 -1KFC 5.0 TRPB_SALTY
108 PsiBlast_CBE 82.8553% -59 - C1 -4XUG 4.7 TRPB_SALTY
81 PsiBlast_CBE 82.8254% -64 - C1 -1A5B 5.3 TRPB_SALTY
115 PsiBlast_CBE 82.7853% -59 - C1 -2RH9 5.0 TRPB_SALTY
111 PsiBlast_CBE 82.7153% -59 - C1 -4HT3 4.7 TRPB_SALTY
97 PsiBlast_CBE 82.7154% -63 - C1 -2CLE 4.9 TRPB_SALTY
94 PsiBlast_CBE 82.7154% -56 - C1 -2CLM 8.4 TRPB_SALTY
117 PsiBlast_CBE 82.6553% -55 - C1 -1KFJ 8.3 TRPB_SALTY
104 PsiBlast_CBE 82.6553% -59 - C1 -5CGQ 4.9 TRPB_SALTY
106 PsiBlast_CBE 82.6353% -60 - C1 -4ZQC 4.5 TRPB_SALTY
95 PsiBlast_CBE 82.5654% -58 - C1 -2CLH 4.1 TRPB_SALTY
96 PsiBlast_CBE 82.4754% -60 - C1 -2CLF 4.4 TRPB_SALTY
109 PsiBlast_CBE 82.4653% -60 - C1 -4WX2 4.5 TRPB_SALTY
83 PsiBlast_CBE 82.3554% -62 - C1 -1TTQ 3.9 TRPB_SALTY
98 PsiBlast_CBE 82.3254% -58 - C1 -1A50 4.7 TRPB_SALTY
88 PsiBlast_CBE 82.2754% -56 - C1 -1C8V 4.5 TRPB_SALTY
116 PsiBlast_CBE 82.2653% -57 - C1 -1KFK 4.5 TRPB_SALTY
105 PsiBlast_CBE 82.0853% -58 - C1 -5BW6 4.9 TRPB_SALTY
93 PsiBlast_CBE 81.8854% -55 - C1 -2CLO 8.6 TRPB_SALTY
102 PsiBlast_CBE 81.8653% -60 - C1 -1UBS 6.6 TRPB_SALTY
84 PsiBlast_CBE 81.7054% -59 - C1 -1TTP 3.8 TRPB_SALTY
110 PsiBlast_CBE 81.6653% -52 - C1 -4KKX 10.1 TRPB_SALTY
114 PsiBlast_CBE 81.6053% -53 - C1 -4HN4 8.6 TRPB_SALTY
85 PsiBlast_CBE 81.5554% -58 - C1 -1CX9 4.5 TRPB_SALTY
112 PsiBlast_CBE 81.5253% -52 - C1 -4HPX 9.3 TRPB_SALTY
113 PsiBlast_CBE 81.5153% -51 - C1 -4HPJ 10.4 TRPB_SALTY
89 PsiBlast_CBE 81.5154% -57 - C1 -1C29 4.5 TRPB_SALTY
91 PsiBlast_CBE 81.5054% -56 - C1 -1A5S 6.5 TRPB_SALTY
87 PsiBlast_CBE 81.4954% -56 - C1 -1C9D 4.4 TRPB_SALTY
86 PsiBlast_CBE 81.3854% -56 - C1 -1CW2 4.9 TRPB_SALTY
103 PsiBlast_CBE 81.3753% -52 - C1 -3PR2 10.8 TRPB_SALTY
99 PsiBlast_CBE 81.0853% -54 - C1 -2TYS 9.9 TRPB_SALTY
130 HHSearch 81.0161% -90 - C1 -4NEG 2.1 TRPB_BACAN
12 PsiBlast_PDB 80.9660% -89 - C1 -4NEG 2.1 TRPB_BACAN
100 PsiBlast_CBE 80.8153% -54 - C1 -2TSY 6.9 TRPB_SALTY
90 PsiBlast_CBE 80.7454% -59 - C1 -1BKS 4.5 TRPB_SALTY
101 PsiBlast_CBE 80.4453% -57 - C1 -2TRS 7.2 TRPB_SALTY
92 PsiBlast_CBE 79.3354% -65 - C1 -2WSY 4.6 TRPB_SALTY
133 HHSearch 75.9650% -26 - C1 -5CGQ 4.9 TRPB_SALTY
135 HHSearch 75.1151% -20 - C1 -3PR2 10.5 TRPB_SALTY
120 Fugue 73.1350% -15 - C1 -2TYS 8.3 TRPB_SALTY