@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VRR0: (2017-12-04 )
MMNTEKLLIANRGEIAVRIIHACRDMGISSVALYADDDIGSMHVELADEAWGLAGATASETYLNIPAIIEVAKKSKATMVHPGYGFLSERAEFAQAVIDAGLKWVGPSPSAIEKLGDKIEARKIAASVGAPLVQGTQDPLENADEALEFAKQYGLPIAIKAAFGGGGRGLKVAWKLEEVKELYESAVREAKAAFGRGECFVEQYLDKPRHVEAQVIADQHGNIVVLGTRDCSLQRRNQKLVEEAPAPFISDEIYQQILSSAKNICQAANYVGAGTVEYLLSRDGKLSFLEVNTRLQVEHPVTEETSKVDLVVEQIRVAQGHKLSIKETPKAQGHAIEFRINAEDPARGFILAFGVLSLFEAPFGNGVRVDTGVRTGSLVSSHFDSLMAKLIITGPTREVAIARAKRALKQFKIEGVASVLDFHRAVLNEPDFTDEFNVHTRWIENDFKQELKPTKRGIPNHQQPMLLSYIEINGKLHRLGLPAGMFAQGPATAAQAQTAEHLLAPINGVISAWKVENGEQVTEGQVVAIMEAMKMEVQVLAHRSGVIQLSAEKGETCHAETAIASIH

Atome Classification :

(47 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_B_7(3G8C)
ACCC_ECOLI
[Raw transfer]




ADP_A_8(3OUZ)
?
[Raw transfer]




ADP_A_4(3RV3)
ACCC_ECOLI
[Raw transfer]




ATP_A_3(1DV2)
ACCC_ECOLI
[Raw transfer]




ADP_A_4(3RUP)
ACCC_ECOLI
[Raw transfer]




ADP_A_2(3RV4)
ACCC_ECOLI
[Raw transfer]




ATF_A_4(2VR1)
ACCC_ECOLI
[Raw transfer]




AP2_A_2(2VQD)
ACCC_PSEAE
[Raw transfer]




ANP_A_7(3OUU)
?
[Raw transfer]




ADP_A_3(3G8C)
ACCC_ECOLI
[Raw transfer]




ATP_B_4(1DV2)
ACCC_ECOLI
[Raw transfer]




ADP_B_4(3G8D)
ACCC_ECOLI
[Raw transfer]




ANP_A_5(2J9G)
ACCC_ECOLI
[Raw transfer]




ADP_B_8(2J9G)
ACCC_ECOLI
[Raw transfer]




ACP_A_2(4MV4)
ACCC_HAEIN
[Raw transfer]




ACP_A_2(4MV3)
ACCC_HAEIN
[Raw transfer]




ACP_A_3(4MV8)
ACCC_HAEIN
[Raw transfer]




GOL_A_5(3VA7)
?
[Raw transfer]




LZK_B_4(2V59)
ACCC_ECOLI
[Raw transfer]




LZK_A_3(2V59)
ACCC_ECOLI
[Raw transfer]




ADP_A_3(4MV1)
ACCC_HAEIN
[Raw transfer]




LZL_A_3(2V5A)
ACCC_ECOLI
[Raw transfer]




L23_A_4(2W71)
ACCC_ECOLI
[Raw transfer]




LZJ_A_3(2V58)
ACCC_ECOLI
[Raw transfer]




L22_B_5(2W70)
ACCC_ECOLI
[Raw transfer]




GOL_A_5(3VA7)
?
[Raw transfer]




L22_A_3(2W70)
ACCC_ECOLI
[Raw transfer]




OA4_A_3(2W6P)
ACCC_ECOLI
[Raw transfer]




LZJ_B_5(2V58)
ACCC_ECOLI
[Raw transfer]




OA2_A_3(2W6N)
ACCC_ECOLI
[Raw transfer]




L23_C_6(2W71)
ACCC_ECOLI
[Raw transfer]




OA2_B_5(2W6N)
ACCC_ECOLI
[Raw transfer]




JZL_A_3(3JZI)
ACCC_ECOLI
[Raw transfer]




ADP_B_9(3RUP)
ACCC_ECOLI
[Raw transfer]




ADP_B_7(3RV3)
ACCC_ECOLI
[Raw transfer]




ADP_A_3(4RZQ)
ACCC_HAEIN
[Raw transfer]




122 HHSearch 83.3856% -74 - C4 -5MLK - ? -
1 PsiBlast_PDB 83.0555% -74 - C4 -5MLK - ? -
124 HHSearch 77.3140% -51 - C4 -3N6R - ? -
121 HHSearch 77.2141% -48 - C4 -3U9S - ? -
21 PsiBlast_CBE 75.5543% -32 - C4 -2VPQ - ? -
120 HHSearch 75.2741% -49 - C4 -3U9T - ? -
123 HHSearch 75.2356% -71 - C4 -5MLK - ? -
2 PsiBlast_PDB 75.0443% -30 - C4 -2VPQ - ? -
138 HHSearch 74.9543% -32 - C4 -2VPQ - ? -
139 HHSearch 74.6438% -90 - C4 -3OUZ 6.9 ?
140 HHSearch 74.1938% -89 - C4 -3OUU 5.9 ?
142 HHSearch 73.2241% -62 - C4 -1ULZ - ? -
52 PsiBlast_CBE 72.9745% -17 - C4 -2W6M - ACCC_ECOLI -
50 PsiBlast_CBE 72.6245% -16 - C4 -2W6N 4.7 ACCC_ECOLI
60 PsiBlast_CBE 72.5845% -18 - C4 -2V58 5.8 ACCC_ECOLI
8 PsiBlast_PDB 72.5647% -67 - C4 -4RZQ 3.3 ACCC_HAEIN
39 PsiBlast_CBE 72.5145% -16 - C4 -2W71 6.0 ACCC_ECOLI
31 PsiBlast_CBE 72.4945% -19 - C4 -3RUP 6.8 ACCC_ECOLI
41 PsiBlast_CBE 72.4845% -18 - C4 -2W70 3.7 ACCC_ECOLI
9 PsiBlast_PDB 72.2644% -14 - C4 -2VQD 7.2 ACCC_PSEAE
68 PsiBlast_CBE 72.1445% -18 - C4 -3G8D 4.7 ACCC_ECOLI
58 PsiBlast_CBE 72.1145% -16 - C4 -2V59 4.8 ACCC_ECOLI
57 PsiBlast_CBE 71.8345% -15 - C4 -2V5A 5.3 ACCC_ECOLI
34 PsiBlast_CBE 71.7045% -12 - C4 -3G8C 5.6 ACCC_ECOLI
30 PsiBlast_CBE 71.6145% -15 - C4 -3RV3 6.3 ACCC_ECOLI
55 PsiBlast_CBE 71.5345% -16 - C4 -2VR1 4.1 ACCC_ECOLI
40 PsiBlast_CBE 71.5045% -16 - C4 -2W71 6.2 ACCC_ECOLI
67 PsiBlast_CBE 71.4745% -15 - C4 -3RV4 7.7 ACCC_ECOLI
18 PsiBlast_PDB 71.4345% -16 - C4 -3JZI 7.7 ACCC_ECOLI
5 PsiBlast_PDB 71.3047% -14 - C4 -4MV4 3.9 ACCC_HAEIN
62 PsiBlast_CBE 71.2845% -18 - C4 -2J9G 6.8 ACCC_ECOLI
42 PsiBlast_CBE 71.2245% -14 - C4 -2W70 3.7 ACCC_ECOLI
15 PsiBlast_PDB 71.2145% -16 - C4 -3RUP 7.8 ACCC_ECOLI
66 PsiBlast_CBE 71.1445% -17 - C4 -1DV2 5.0 ACCC_ECOLI
63 PsiBlast_CBE 71.1345% -16 - C4 -2J9G 5.4 ACCC_ECOLI
65 PsiBlast_CBE 71.0345% -13 - C4 -1DV2 4.3 ACCC_ECOLI
19 PsiBlast_PDB 70.8945% -15 - C4 -3G8C 5.2 ACCC_ECOLI
59 PsiBlast_CBE 70.8645% -14 - C4 -2V59 4.9 ACCC_ECOLI
47 PsiBlast_CBE 70.6845% -13 - C4 -2W6P 4.8 ACCC_ECOLI
51 PsiBlast_CBE 70.6745% -12 - C4 -2W6N 4.7 ACCC_ECOLI
16 PsiBlast_PDB 70.6145% -16 - C4 -3RV3 7.4 ACCC_ECOLI
61 PsiBlast_CBE 70.5545% -13 - C4 -2V58 5.6 ACCC_ECOLI
4 PsiBlast_PDB 70.0647% -15 - C4 -4MV3 4.7 ACCC_HAEIN
3 PsiBlast_PDB 70.0147% -16 - C4 -4MV1 4.5 ACCC_HAEIN
6 PsiBlast_PDB 68.6247% -14 - C4 -4MV8 4.4 ACCC_HAEIN
146 Fugue 65.3631% -12 - C4 -3VA7 2.1 ?
106 PsiBlast_CBE 62.6240% -38 - C4 -3VA7 2.1 ?