@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VTH6: (2017-12-13 )
MSLYITDECINCDVCEPVCPNEAIFMGEVIYEINPDLCTECVGHHDQPQCQLFCPVDCIPKDPQHEETEEQLLDKYKRLIAQKSTSN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SF4_A_2(3EUN)
FER_ALLVD
[Raw transfer]




SF4_A_2(2FGO)
?
[Raw transfer]




SF4_A_2(3EUN)
FER_ALLVD
[Raw transfer]




SF4_C_8(2ZVS)
YFHL_ECOLI
[Raw transfer]




SF4_A_2(3EXY)
FER_ALLVD
[Raw transfer]




SF4_A_2(1BLU)
FER_ALLVD
[Raw transfer]




SF4_B_6(2ZVS)
YFHL_ECOLI
[Raw transfer]




SF4_A_2(3EXY)
FER_ALLVD
[Raw transfer]




SF4_A_4(2ZVS)
YFHL_ECOLI
[Raw transfer]




SF4_A_4(2ZVS)
YFHL_ECOLI
[Raw transfer]




1 PsiBlast_PDB 83.1662%-122 - C4 -2FGO 4.2 ?
4 PsiBlast_PDB 82.2961%-122 - C4 -3EUN 4.2 FER_ALLVD
2 PsiBlast_PDB 82.1662%-138 - C4 -1BLU 4.2 FER_ALLVD
3 PsiBlast_PDB 80.7161%-131 - C4 -3EXY 4.3 FER_ALLVD
5 PsiBlast_PDB 75.9865%-157 - C4 -2ZVS 3.9 YFHL_ECOLI
21 PsiBlast_CBE 75.4165%-127 - C4 -2ZVS 3.9 YFHL_ECOLI
85 HHSearch 74.3968%-174 - C4 -3EXY 4.3 FER_ALLVD
22 PsiBlast_CBE 74.3065%-135 - C4 -2ZVS 3.4 YFHL_ECOLI
6 PsiBlast_PDB 73.9556%-134 - C4 -1RGV - ? -
90 HHSearch 71.3766%-204 - C4 -3EUN 4.2 FER_ALLVD
87 HHSearch 67.0057%-177 - C4 -2ZVS 3.9 YFHL_ECOLI
86 HHSearch 66.8355%-205 - C4 -1RGV - ? -
12 PsiBlast_PDB 58.0333% -77 - C4 -5LDX - NDUS8_BOVIN -
17 PsiBlast_PDB 58.0130% 5 - C4 -1BQX - FER_HYDSH -
11 PsiBlast_PDB 57.3133% -77 - C4 -5LDW - NDUS8_BOVIN -
18 PsiBlast_PDB 56.5030% 6 - C4 -1BWE - FER_HYDSH -
10 PsiBlast_PDB 56.0533% -80 - C4 -5LC5 - NDUS8_BOVIN -
23 PsiBlast_CBE 55.2633% -41 - C4 -1HFE - PHFL_DESVH -
8 PsiBlast_PDB 54.9039%-269 - C4 -1FDN - FER_CLOA9 -
14 PsiBlast_PDB 54.0133% -44 - C4 -1HFE - PHFL_DESVH -