@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : I3U105: (2017-12-18 )
MENKEQAQQAVYKETIDSLMQQTQSSTDGLSTTQAKEKLERDGLNQLKEKPKKPTWKLFLETFKDAMVIVLLIVALIQMVMGDYIEFLVIFAVLMLNSIISVVQTKKAEGSLEALKNLSAPDARVIRDGKEKTIPANELVVGDIVLLDAGDYVPADGRLLDAGSLKVDEGMLTGESTSAEKEVTDITSTVPIGDRTNMVFSGTIVTYGRGKFLVTSTGNNTEIGQVAGLLESTTEQVTPLQRGLDKFSKKLSLAILALSLLILGIQLFRIYLGEGTGDMTADIVSAVMFAVAVAVAAIPEALQSIVTIVLSLGTNKMAKRHAIIRKLPAVETLGSTSIICTDKTGTLTQNKMTVVDYFLGNGDTGDFTNDPSKWTADERRLIEISVLANDASISEDGTKLGDPTEVAFIDFSEKLNQPYQEIRNNYPRQAELPFDSDRKLMSTGHTIDNKNYLFVKGGPDIVFQRSKKVLLNGEVVPMTDELMKKFQEQNEAFSTRALRVLAFAYRPLDNFDLSFEDEDDLILVGLLAMIDPPRAEVTQAVTEARSAGIKTIMITGDHKTTAVAIAKQIGIFEEGNLALTGTELDELTEDQLNEVLEKVTVYARVSPENKIRIVRAWQNKGHISAMTGDGVNDAPALKQADIGIAMGTGTDVAKDAAAMVLTDDNFASIVSAVEVGRNVFDNIKKAISYLFAGNLGAIIAIIFALVADWSNPFTALQLLFINLVNDSLPAIALGTEKAEPATMNRPPRDPNSGIFTDKTLISVTYRGVLIGIAVIFAQWLGMQHSPEFGVAMSFSTLIWCRTLQTFPARSNTQTAIQAGFFSNRSVLLAVVVCSALYCLTMIPGLKEVFSIPSAFGLTEVFTCMGIALVTIVLMEITKLIIVRVQGNK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

7BS_A_5(4YCM)
AT2A1_RABIT
[Raw transfer]




7BL_A_5(4YCN)
AT2A1_RABIT
[Raw transfer]




CZA_A_4(4YCL)
AT2A1_RABIT
[Raw transfer]




PCW_A_3(4UU1)
AT2A1_RABIT
[Raw transfer]




PTY_A_7(3AR4)
AT2A1_RABIT
[Raw transfer]




PTY_A_6(3AR3)
?
[Raw transfer]




CZA_A_4(2EAT)
AT2A1_RABIT
[Raw transfer]




PCW_A_11(5XAA)
?
[Raw transfer]




71 PsiBlast_CBE 93.6837% 0 - C- -1WPG - AT2A1_RABIT -
70 PsiBlast_CBE 93.6837% 0 - C- -1WPG - AT2A1_RABIT -
69 PsiBlast_CBE 93.6837% 0 - C- -1WPG - AT2A1_RABIT -
7 PsiBlast_PDB 93.6837% 0 - C- -1WPG - AT2A1_RABIT -
109 HHSearch 79.4237% -4 - C2 -3AR4 - AT2A1_RABIT -
106 HHSearch 77.7834% -9 - C2 -2ZXE - ? -
130 Fugue 76.4436% -8 - C2 -1SU4 - AT2A1_RABIT -
34 PsiBlast_CBE 74.6937% 11 - C2 -4H1W - AT2A1_RABIT -
92 PsiBlast_CBE 74.0335% 8 - C2 -4XE5 - AT1A1_BOVIN -
98 PsiBlast_CBE 73.6435% 16 - C2 -5AW4 - ? -
94 PsiBlast_CBE 73.6235% 16 - C2 -5AW8 - ? -
105 PsiBlast_CBE 73.6135% 16 - C2 -5AVX - ? -
96 PsiBlast_CBE 73.6135% 16 - C2 -5AW6 - ? -
100 PsiBlast_CBE 73.5635% 16 - C2 -5AW2 - ? -
103 PsiBlast_CBE 73.5435% 16 - C2 -5AVZ - ? -
97 PsiBlast_CBE 73.5435% 16 - C2 -5AW5 - ? -
99 PsiBlast_CBE 73.4835% 16 - C2 -5AW3 - ? -
95 PsiBlast_CBE 73.4735% 16 - C2 -5AW7 - ? -
101 PsiBlast_CBE 73.4535% 16 - C2 -5AW1 - ? -
104 PsiBlast_CBE 73.4435% 16 - C2 -5AVY - ? -