@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : I3U1A8: (2017-12-19 )
MQNSSNKLPKTYNHIAFKIDEQDIDSFVSKIQMLGLTVEPGRSRVKGEASSIYFYDYDNHLFELHTGTLQERLKSYNSTT

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CIT_C_3(2P7K)
FOSX_LISMO
[Raw transfer]




FCN_A_4(4JH6)
FOSB_BACC1
[Raw transfer]




GG6_D_15(2P7Q)
?
[Raw transfer]




CIT_D_4(2P7K)
FOSX_LISMO
[Raw transfer]




GG6_A_14(2P7Q)
?
[Raw transfer]




GG6_E_18(2P7Q)
?
[Raw transfer]




GG6_C_16(2P7Q)
?
[Raw transfer]




GOL_B_7(2P7L)
FOSX_LISMO
[Raw transfer]




GG6_E_18(2P7Q)
?
[Raw transfer]




GG6_F_17(2P7Q)
?
[Raw transfer]




GG6_B_13(2P7Q)
?
[Raw transfer]




FCN_A_8(1LQP)
FOSA_PSEAE
[Raw transfer]




62 HHSearch 90.5458% -79 - C5 -2P7O - FOSX_LISMO -
32 PsiBlast_CBE 90.5357%-133 - C5 -2P7Q 3.7 ?
4 PsiBlast_PDB 89.1558% -81 - C5 -2P7O - FOSX_LISMO -
3 PsiBlast_PDB 87.2458% -94 - C5 -2P7M - FOSX_LISMO -
5 PsiBlast_PDB 85.8658% -92 - C5 -2P7P - FOSX_LISMO -
7 PsiBlast_PDB 85.5462%-125 - C5 -1R9C - FOSX_RHILO -
28 PsiBlast_CBE 85.4558% -96 - C5 -2P7K 3.2 FOSX_LISMO
6 PsiBlast_PDB 85.2157%-116 - C5 -2P7Q 4.0 ?
1 PsiBlast_PDB 85.2158% -97 - C5 -2P7K 2.8 FOSX_LISMO
74 HHSearch 85.0857%-118 - C5 -1R9C - FOSX_RHILO -
68 HHSearch 84.4657% -81 * C5 *2P7Q 4.1 ?
2 PsiBlast_PDB 84.3558% -76 - C5 -2P7L - FOSX_LISMO -
33 PsiBlast_CBE 84.3257%-118 - C5 -2P7Q 4.1 ?
31 PsiBlast_CBE 83.3957% -86 - C5 -2P7Q 4.2 ?
30 PsiBlast_CBE 83.3557% -83 - C5 -2P7Q 4.1 ?
27 PsiBlast_CBE 83.0258%-116 - C5 -2P7L 2.9 FOSX_LISMO
29 PsiBlast_CBE 82.3057% -90 - C5 -2P7Q 4.5 ?
20 PsiBlast_PDB 80.1035%-122 - C5 -1NPB - FOSA_SERMA -
46 PsiBlast_CBE 79.3138% -76 - C5 -4IR0 - FOSB2_BACAN -
40 PsiBlast_CBE 77.5539%-115 - C5 -4JH4 - FOSB_BACC1 -
63 HHSearch 76.1739%-116 - C5 -4JH6 3.1 FOSB_BACC1