@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : I3U2S9: (2017-12-23 )
MFNMKESVFQGRSLLAEKDFTKEELQYLIDFSEHLKDLKKRGIPHHYLEGKNIALLFEKTSTRTRSAFTTAAIDLGAHPEYLGANDIQLGKKESTEDTAKVLGRMFDGIEFRGFSQKMVEELAEFSGVPVWNGLTDEWHPTQMIADFLTIQENFGTVEGITVAYCGDGRNNMANSLLVTGAILGANMRIVAPKELQPEEEIVKMAEGFAEKSGAQLMITDDVDKGVDGADVLYSDVWVSMGEEDKFEERIKLLKPYQINMEMVEKTHNTDRLIFLHCLPAFHDTNTVYGEQMKERFGITEMEVTDEVFRSKYARQFDQAENRMHSIKAIMAATLGNLFIPRV

Atome Classification :

(43 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PSQ_D_4(1DUV)
OTC1_ECOLI
[Raw transfer]



PSQ_F_6(1DUV)
OTC1_ECOLI
[Raw transfer]



PSQ_E_5(1DUV)
OTC1_ECOLI
[Raw transfer]



PSQ_E_5(1DUV)
OTC1_ECOLI
[Raw transfer]



PAO_D_4(1OTH)
OTC_HUMAN
[Raw transfer]



CIR_C_16(4JQO)
OTC_VIBVU
[Raw transfer]



CIR_B_11(4JQO)
OTC_VIBVU
[Raw transfer]



CIR_A_5(4JQO)
OTC_VIBVU
[Raw transfer]



PUW_B_9(4A8H)
PTC_ENTFA
[Raw transfer]



CP_A_4(4JFR)
OTC_VIBVU
[Raw transfer]



PAO_A_2(4A8T)
PTC_ENTFA
[Raw transfer]



CP_G_7(1C9Y)
OTC_HUMAN
[Raw transfer]



CP_A_5(4H31)
OTC_VIBVU
[Raw transfer]



CP_C_13(2I6U)
OTC_MYCTU
[Raw transfer]



CP_C_13(2I6U)
OTC_MYCTU
[Raw transfer]



PUW_A_3(4A8H)
PTC_ENTFA
[Raw transfer]



CP_C_12(4NF2)
OTC_BACAN
[Raw transfer]



CP_B_6(4JFR)
OTC_VIBVU
[Raw transfer]



CP_A_4(4NF2)
OTC_BACAN
[Raw transfer]



CP_A_4(4NF2)
OTC_BACAN
[Raw transfer]



CP_A_9(2I6U)
OTC_MYCTU
[Raw transfer]



CP_D_4(1EP9)
OTC_HUMAN
[Raw transfer]



CP_B_10(4NF2)
OTC_BACAN
[Raw transfer]



CP_B_11(2I6U)
OTC_MYCTU
[Raw transfer]



CP_J_10(1FVO)
OTC_HUMAN
[Raw transfer]



CP_G_7(1FVO)
OTC_HUMAN
[Raw transfer]



CP_A_4(3R7F)
PYRB_BACSU
[Raw transfer]



CP_C_16(3R7F)
PYRB_BACSU
[Raw transfer]



ARG_A_6(4JHX)
OTC_VIBVU
[Raw transfer]



CP_B_11(3R7F)
PYRB_BACSU
[Raw transfer]



PE5_B_26(4H31)
OTC_VIBVU
[Raw transfer]
129 HHSearch 95.2975% -70 - C8 -2W37 - OTCC_LACHI -
1 PsiBlast_PDB 94.1673% -70 - C8 -2W37 - OTCC_LACHI -
141 HHSearch 80.9844% -99 - C8 -1A1S - OTCA_PYRFU -
16 PsiBlast_PDB 79.9442% -98 - C8 -1A1S - OTCA_PYRFU -
131 HHSearch 79.9049% -97 * C8 *1VLV - OTC_THEMA -
12 PsiBlast_PDB 79.2948% -98 - C8 -1VLV - OTC_THEMA -
42 PsiBlast_CBE 79.1052% -29 - C8 -2OTC - OTC1_ECOLI -
36 PsiBlast_CBE 78.9652% -29 - C8 -2OTC - OTC1_ECOLI -
29 PsiBlast_CBE 78.9151% -26 - C8 -4JFR - OTC_VIBVU -
137 HHSearch 78.6743% -98 - C8 -1PVV - OTCA_PYRFU -
10 PsiBlast_PDB 78.6552% -31 - C8 -1DUV 6.9 OTC1_ECOLI
140 HHSearch 78.6242% -96 - C8 -4NF2 4.9 OTC_BACAN
5 PsiBlast_PDB 78.5051% -20 - C8 -4JHX 2.8 OTC_VIBVU
33 PsiBlast_CBE 78.4252% -29 - C8 -1DUV 6.7 OTC1_ECOLI
38 PsiBlast_CBE 78.3652% -29 - C8 -2OTC - OTC1_ECOLI -
37 PsiBlast_CBE 78.3652% -29 - C8 -2OTC - OTC1_ECOLI -
39 PsiBlast_CBE 78.3252% -29 - C8 -2OTC - OTC1_ECOLI -
30 PsiBlast_CBE 78.2451% -20 - C8 -4JFR 4.5 OTC_VIBVU
41 PsiBlast_CBE 78.1852% -29 - C8 -2OTC - OTC1_ECOLI -
40 PsiBlast_CBE 78.1252% -29 - C8 -2OTC - OTC1_ECOLI -
4 PsiBlast_PDB 78.0751% -19 - C8 -4JFR 4.7 OTC_VIBVU
26 PsiBlast_CBE 77.9851% -19 - C8 -4JQO 3.6 OTC_VIBVU
34 PsiBlast_CBE 77.9652% -28 - C8 -1DUV 6.8 OTC1_ECOLI
25 PsiBlast_CBE 77.8951% -18 - C8 -4JQO 3.7 OTC_VIBVU
32 PsiBlast_CBE 77.4951% -18 - C8 -4H31 2.4 OTC_VIBVU
3 PsiBlast_PDB 77.4551% -23 - C8 -4H31 5.1 OTC_VIBVU
6 PsiBlast_PDB 77.3751% -19 - C8 -4JQO 3.8 OTC_VIBVU
43 PsiBlast_CBE 76.9940% -95 - C8 -4NF2 4.9 OTC_BACAN
18 PsiBlast_PDB 76.9440% -94 - C8 -4NF2 4.9 OTC_BACAN
130 HHSearch 76.7452% -18 - C8 -1DUV 6.8 OTC1_ECOLI
44 PsiBlast_CBE 76.6140% -94 - C8 -4NF2 4.9 OTC_BACAN
19 PsiBlast_PDB 65.2737% -18 - C8 -1OTH 7.5 OTC_HUMAN
20 PsiBlast_PDB 65.2637% -16 - C8 -1C9Y 4.8 OTC_HUMAN
47 PsiBlast_CBE 65.0937% -18 - C8 -1EP9 4.9 OTC_HUMAN
142 HHSearch 64.6837% -12 - C8 -2I6U 4.3 OTC_MYCTU
46 PsiBlast_CBE 64.4437% -19 - C8 -1FVO 3.8 OTC_HUMAN
55 PsiBlast_CBE 64.0135% -13 - C8 -2I6U 4.4 OTC_MYCTU
45 PsiBlast_CBE 63.9937% -16 - C8 -1FVO 4.0 OTC_HUMAN
54 PsiBlast_CBE 63.1635% -7 - C8 -2I6U 4.3 OTC_MYCTU
56 PsiBlast_CBE 61.8935% -9 - C8 -2I6U 4.1 OTC_MYCTU
118 PsiBlast_CBE 43.0632% -5 - C8 -3R7F 4.1 PYRB_BACSU
117 PsiBlast_CBE 41.9832% -5 - C8 -3R7F 3.1 PYRB_BACSU
116 PsiBlast_CBE 41.3732% -1 - C8 -3R7F 4.0 PYRB_BACSU