@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : I3U3R3: (2017-12-25 )
MIEMKDVMKKYSNGTTAIRNLSIVIEQGEFVYVVGPSGAGKSTFIKLMYREEKASKGTLNVAGHDLIAIKNREVPYLRREIGVVFQDYKLLPRKTVYENVAYAMQVIGRKPRDIKKRVMEVLDLVGLKHKVRVFPSELSGGEQQRVSIARAIVNTPKVLIADEPTGNLDPENSWEIMKLLDRINAQGTTVVMATHNSTIVNTIRHRVIAIENGRIIRDQAEGEYGYDD

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AGS_B_6(3C4J)
?
[Raw transfer]



ATP_E_5(2FGJ)
HLYBP_ECOLX
[Raw transfer]



ANP_J_5(3C41)
?
[Raw transfer]



ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]



ATP_C_11(1XEF)
HLYBP_ECOLX
[Raw transfer]



ATP_B_10(1XEF)
HLYBP_ECOLX
[Raw transfer]



ATP_D_12(1XEF)

[Raw transfer]



AGS_A_4(3C4J)
?
[Raw transfer]



ACP_A_4(4AYT)
ABCBA_HUMAN
[Raw transfer]



ANP_K_6(3C41)
?
[Raw transfer]



ADP_A_3(4YER)
?
[Raw transfer]



ATP_F_6(2FGJ)
HLYBP_ECOLX
[Raw transfer]



ACP_A_4(4AYX)
ABCBA_HUMAN
[Raw transfer]



12D_A_2(3B5J)

[Raw transfer]



AT4_D_8(2OLK)
?
[Raw transfer]



ADP_B_6(2OLJ)
?
[Raw transfer]



AT4_C_7(2OLK)
?
[Raw transfer]



IPA_A_6(3TIF)
Y796_METJA
[Raw transfer]
11 PsiBlast_PDB 81.1537% 0 - C- -5NIL - ? -
10 PsiBlast_PDB 81.1537% 0 - C- -5NIK - ? -
136 HHSearch 79.2538% -10 - C1 -3TUI - METN_ECOLI -
23 PsiBlast_CBE 78.8438% -5 - C1 -3TUZ - METN_ECOLI -
2 PsiBlast_PDB 78.0738% -6 - C1 -3TUI - METN_ECOLI -
3 PsiBlast_PDB 77.8438% -4 - C1 -3TUZ - METN_ECOLI -
24 PsiBlast_CBE 77.4538% -16 - C1 -3TUI - METN_ECOLI -
124 HHSearch 77.3431%-123 - C1 -2AWN - MALK_ECOLI -
25 PsiBlast_CBE 77.2138% -20 - C1 -3TUI - METN_ECOLI -
22 PsiBlast_CBE 76.8538% -9 - C1 -3TUZ - METN_ECOLI -
127 HHSearch 76.1532%-123 - C1 -4YER 5.9 ?
20 PsiBlast_PDB 75.9635%-111 - C1 -2IT1 - ? -
4 PsiBlast_PDB 75.8338% -6 - C1 -3TUJ - METN_ECOLI -
125 HHSearch 74.1931%-128 - C1 -3RLF - MALK_ECOLI -
26 PsiBlast_CBE 73.9538% -8 - C1 -3TUI - METN_ECOLI -
126 HHSearch 73.7539% -7 - C1 -3DHW - METN_ECOLI -
21 PsiBlast_CBE 73.5338% -15 - C1 -3TUZ - METN_ECOLI -
41 PsiBlast_CBE 71.2537% 37 - C1 -1L2T - Y796_METJA -
1 PsiBlast_PDB 70.8338% -3 - C1 -3DHW - METN_ECOLI -
42 PsiBlast_CBE 70.5036% 39 - C1 -3TIF 3.4 Y796_METJA
101 PsiBlast_CBE 52.9037% -29 - C1 -1XEF 5.1
103 PsiBlast_CBE 52.4837% -31 - C1 -1XEF 5.5 HLYBP_ECOLX
99 PsiBlast_CBE 52.3437% -29 - C1 -2FGJ 4.9 HLYBP_ECOLX
102 PsiBlast_CBE 52.2637% -33 - C1 -1XEF 4.8 HLYBP_ECOLX
98 PsiBlast_CBE 51.9237% -32 - C1 -2FGJ 5.4 HLYBP_ECOLX