@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XXR7: (2018-01-05 )
MELNRMIDHTILKADASKEAVMQIIEEAKKYHFYSVCINPAWVALAKEQLQGEPVAVCTVIGFPLGANTPETKAFETTDAINNGADEVDMVINIGALKSKDDQQVQKDIEAVVEAAKDRALVKVIIETSLLDREEIIRACEIAKAAGADFVKTSTGFSTGGAKVEDVRLMRETVGPEMGVKASGGIHNEEEAMAMIEAGATRIGTSAGVAIVSGSTGEGY

Atome Classification :

(43 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_7(3R13)
DEOC_THEMA
[Raw transfer]




HPD_A_5(1UB3)
DEOC_THET8
[Raw transfer]




HPD_B_6(1UB3)
DEOC_THET8
[Raw transfer]




HPD_D_8(1UB3)
DEOC_THET8
[Raw transfer]




HPD_C_7(1UB3)
DEOC_THET8
[Raw transfer]




GOL_B_12(3R13)
DEOC_THEMA
[Raw transfer]




CIT_A_3(3R12)
DEOC_THEMA
[Raw transfer]




CIT_A_3(3R12)
DEOC_THEMA
[Raw transfer]




HPD_A_3(1JCJ)
DEOC_ECOLI
[Raw transfer]




UNL_B_7(3NG3)
DEOC_MYCA1
[Raw transfer]




UNL_D_12(3NG3)
DEOC_MYCA1
[Raw transfer]




UNL_C_9(3NG3)
DEOC_MYCA1
[Raw transfer]




UNL_A_4(3NDO)
?
[Raw transfer]




ACY_B_3(4XBK)
?
[Raw transfer]




UNL_B_7(3NDO)
?
[Raw transfer]




UNL_A_4(3NDO)
?
[Raw transfer]




UNL_A_6(3NG3)
DEOC_MYCA1
[Raw transfer]




1BO_A_2(5EMU)
DEOC_ECOLI
[Raw transfer]




1BO_A_2(5EL1)
DEOC_ECOLI
[Raw transfer]




BU2_A_2(5EKY)
DEOC_ECOLI
[Raw transfer]




UNL_C_10(5C5Y)
?
[Raw transfer]




UNL_D_11(5C5Y)
?
[Raw transfer]




ACY_B_3(5H91)
?
[Raw transfer]




UNL_C_10(5C5Y)
?
[Raw transfer]




UNL_A_5(5C5Y)
?
[Raw transfer]




UNL_D_11(5C5Y)
?
[Raw transfer]




UNL_B_5(5C2X)
?
[Raw transfer]




UNL_B_8(5C5Y)
?
[Raw transfer]




UNL_A_3(5C2X)
?
[Raw transfer]




ACY_B_4(4XBK)
?
[Raw transfer]




EDO_C_16(3NGJ)
?
[Raw transfer]




72 HHSearch 94.0064% -97 * C4 *5DBU - ? -
1 PsiBlast_PDB 93.0463% -92 - C4 -5DBU - ? -
25 PsiBlast_CBE 92.3055%-114 - C4 -3NGJ - ? -
6 PsiBlast_PDB 92.1855%-111 - C4 -3NGJ - ? -
77 HHSearch 91.9955%-113 - C4 -3NGJ - ? -
23 PsiBlast_CBE 91.8655%-113 - C4 -3NGJ 2.8 ?
24 PsiBlast_CBE 91.4555%-111 - C4 -3NGJ - ? -
71 HHSearch 90.6555%-100 - C4 -3R13 2.9 DEOC_THEMA
70 HHSearch 88.6055%-100 - C4 -3R12 2.5 DEOC_THEMA
7 PsiBlast_PDB 88.2053%-102 - C4 -3R12 2.5 DEOC_THEMA
2 PsiBlast_PDB 88.0164% -96 - C4 -5DBT - ? -
8 PsiBlast_PDB 87.0853%-101 - C4 -3R13 3.2 DEOC_THEMA
5 PsiBlast_PDB 86.5554% -49 - C4 -5H91 - ? -
4 PsiBlast_PDB 86.2255% -48 - C4 -4XBK - ? -
22 PsiBlast_CBE 85.9354% -52 - C4 -5H91 3.6 ?
21 PsiBlast_CBE 85.2755% -53 - C4 -4XBK 3.4 ?
3 PsiBlast_PDB 84.5355% -53 - C- -4XBS - ? -
65 HHSearch 84.0146% -82 - C4 -3OA3 - ? -
66 HHSearch 83.5046% -80 - C4 -3OA3 - ? -
12 PsiBlast_PDB 81.8241%-108 - C4 -1MZH - DEOC_AQUAE -
26 PsiBlast_CBE 81.2246%-104 - C4 -1UB3 3.0 DEOC_THET8
28 PsiBlast_CBE 80.5646%-105 - C4 -1UB3 3.0 DEOC_THET8
76 HHSearch 80.4443% -68 - C4 -3NDO 2.9 ?
10 PsiBlast_PDB 79.8946% -99 - C4 -1UB3 3.1 DEOC_THET8
31 PsiBlast_CBE 78.8742% -69 - C4 -3NDO 2.9 ?
27 PsiBlast_CBE 78.8246%-102 - C4 -1UB3 2.8 DEOC_THET8
13 PsiBlast_PDB 78.6542% -68 - C4 -3NDO 2.9 ?
33 PsiBlast_CBE 75.5544% -62 - C4 -3NG3 3.3 DEOC_MYCA1
32 PsiBlast_CBE 75.0044% -60 - C4 -3NG3 3.3 DEOC_MYCA1
14 PsiBlast_PDB 74.1744% -54 - C4 -3NG3 2.9 DEOC_MYCA1
34 PsiBlast_CBE 73.0644% -57 - C4 -3NG3 2.9 DEOC_MYCA1
16 PsiBlast_PDB 64.1537% -2 - C4 -5EKY 2.4 DEOC_ECOLI
17 PsiBlast_PDB 63.9837% -3 - C4 -5EL1 1.5 DEOC_ECOLI
18 PsiBlast_PDB 63.1237% -2 - C4 -5EMU 1.6 DEOC_ECOLI
37 PsiBlast_CBE 61.6435% -2 - C4 -1JCJ 2.4 DEOC_ECOLI
40 PsiBlast_CBE 60.7431% 20 - C4 -5C5Y 3.0 ?
42 PsiBlast_CBE 60.3531% 18 - C4 -5C2X 2.4 ?
39 PsiBlast_CBE 59.4831% 18 - C4 -5C5Y 3.0 ?
38 PsiBlast_CBE 59.2931% 19 - C4 -5C5Y 2.9 ?
41 PsiBlast_CBE 59.1831% 19 - C4 -5C5Y 2.9 ?
61 HHSearch 59.1332% 1 - C4 -5C5Y 3.0 ?
43 PsiBlast_CBE 59.0931% 19 - C4 -5C2X 2.4 ?
62 HHSearch 58.4532% 1 - C4 -5C5Y 3.1 ?