@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XXZ5: (2018-01-06 )
MQLLQQIHGLRGTVRIPADKSISHRSIMFGAIAEGTTTIQNFLRAEDCLSTLHAFQQLGVEIEEEEEVIKIHGRGSHSFVQPTESIDMGNSGTTIRLLMGILAGQPFTTTLFGDASLSKRPMGRVMEPLREMGADLQGEENDQYLPITVTGTRSLSPIRYNMPVASAQVKSALLFAALQAEGTSVIVEKERSRNHTEEMIRQFGGRITVEDKTIIVTGPQKLTGQQITVPGDISSAAFFLAAGLLVPESQLLLKNVGVNPTRTGILDVLEEMGAAITQTNHNEQNQSADLSVKTSHLKKATIGGEIIPRLIDELPILALVATQAEGITIIKDAEELKVKETNRIDAVAEELQKMGAKIKATADGLIIHGPTPLHGAKVSSRGDHRIGMMLQVAALIADGPCELEGAEAVSISYPAFFDDLAELVSGGEAHG

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GG9_A_2(2PQB)
AROA_AGRSC
[Raw transfer]



GG9_A_2(2PQD)
AROA_AGRSC
[Raw transfer]



GG9_A_2(2PQB)
AROA_AGRSC
[Raw transfer]



RC1_A_2(2PQC)
AROA_AGRSC
[Raw transfer]



RC1_A_2(2PQC)
AROA_AGRSC
[Raw transfer]



S3P_A_2(2GGA)
AROA_AGRSC
[Raw transfer]



S3P_A_4(2GG6)
AROA_AGRSC
[Raw transfer]



S3P_A_2(4ZND)
AROA_COXBU
[Raw transfer]



S3P_A_2(2GGD)
AROA_AGRSC
[Raw transfer]



GPJ_A_3(2GGA)
AROA_AGRSC
[Raw transfer]



GPJ_A_3(2GGD)
AROA_AGRSC
[Raw transfer]
2 PsiBlast_PDB 88.1857% -97 - C6 -1RF5 - AROA_STRPN -
23 PsiBlast_CBE 86.8957% -88 - C6 -1RF6 - AROA_STRPN -
22 PsiBlast_CBE 86.5457% -88 - C6 -1RF6 - AROA_STRPN -
25 PsiBlast_CBE 86.4657% -86 - C6 -1RF4 - AROA_STRPN -
26 PsiBlast_CBE 86.1357% -85 - C6 -1RF4 - AROA_STRPN -
3 PsiBlast_PDB 85.7757% -88 - C6 -1RF6 - AROA_STRPN -
43 HHSearch 85.6957% -88 - C6 -1RF6 - AROA_STRPN -
24 PsiBlast_CBE 85.5657% -89 - C6 -1RF4 - AROA_STRPN -
5 PsiBlast_PDB 85.2752%-104 - C6 -4N3P - ? -
1 PsiBlast_PDB 85.0657% -86 - C6 -1RF4 - AROA_STRPN -
21 PsiBlast_CBE 84.9057% -87 - C6 -1RF6 - AROA_STRPN -
38 HHSearch 82.2154% -63 - C6 -3RMT - AROA1_BACHD -
4 PsiBlast_PDB 80.9454% -68 - C6 -3RMT - AROA1_BACHD -
46 HHSearch 74.4543% -15 - C6 -3SLH - AROA_COXBU -
19 PsiBlast_PDB 73.9543% -22 - C6 -2GGA 5.1 AROA_AGRSC
15 PsiBlast_PDB 73.7543% -22 - C6 -2PQB 9.5 AROA_AGRSC
13 PsiBlast_PDB 73.4643% -21 - C6 -2PQD 9.2 AROA_AGRSC
45 HHSearch 73.4343% -15 * C6 *3SLH - AROA_COXBU -
14 PsiBlast_PDB 73.1643% -20 - C6 -2GGD 5.0 AROA_AGRSC
18 PsiBlast_PDB 73.0043% -23 - C6 -2GG6 4.5 AROA_AGRSC
16 PsiBlast_PDB 72.9043% -22 - C6 -2PQC 6.9 AROA_AGRSC
9 PsiBlast_PDB 72.6744% -9 - C6 -4ZND 4.3 AROA_COXBU
39 HHSearch 71.2344% -16 - C6 -2PQB 9.5 AROA_AGRSC
40 HHSearch 70.8144% -17 - C6 -2PQC 6.9 AROA_AGRSC