@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XZG4: (2018-01-14 )
MSELSKAKNRKVGFVLGLTGGIATGKSTAAKVFQSHGFPLIDGDVIARETVEPGTLALRKIVSVFGQEVLQPDGQLDRGKLGMIVFPSKEKRQKLDQLLDPFIRKAIKDQIASLSSNHPLVIVDIPLLYEGHYDHYMDAVAVVYTTPETQLQRLMKRNQLTLEQAQQRISSQLPIEEKKQRADILFDNNGTKEKLVGQIENWLFANRFL

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_2(4TTQ)
COAE_LEGPH
[Raw transfer]




ADP_A_3(4I1V)
?
[Raw transfer]




BA3_B_7(1VHT)
COAE_ECOLI
[Raw transfer]




BA3_A_6(1VHT)
COAE_ECOLI
[Raw transfer]




ADP_A_6(1VHL)
COAE_ECOLI
[Raw transfer]




BU2_A_2(4TTR)
COAE_LEGPH
[Raw transfer]




BU2_A_2(4TTR)
COAE_LEGPH
[Raw transfer]




2 PsiBlast_PDB 94.1237%-138 - C1 -1VHT 9.2 COAE_ECOLI
1 PsiBlast_PDB 93.0937%-134 - C1 -1VHL 7.7 COAE_ECOLI
3 PsiBlast_PDB 92.3337%-130 - C1 -1VIY - COAE_ECOLI -
24 PsiBlast_CBE 91.6837%-132 - C1 -1VHT 9.4 COAE_ECOLI
73 HHSearch 91.3835%-133 - C1 -1VHT - COAE_ECOLI -
75 HHSearch 89.8132%-142 - C1 -4TTR 2.3 COAE_LEGPH
7 PsiBlast_PDB 89.5937%-125 - C1 -1T3H - COAE_ECOLI -
60 Fugue 89.3034%-138 * C1 *1JJV - COAE_HAEIN -
6 PsiBlast_PDB 89.0936%-139 - C1 -4TTR 2.3 COAE_LEGPH
23 PsiBlast_CBE 88.0637%-127 - C1 -1VHT - COAE_ECOLI -
4 PsiBlast_PDB 88.0136%-125 - C- -4TTP - COAE_LEGPH -
74 HHSearch 87.7736%-117 - C1 -1T3H - COAE_ECOLI -
5 PsiBlast_PDB 87.7336%-137 - C1 -4TTQ 5.3 COAE_LEGPH
77 HHSearch 85.3032% -84 - C1 -4I1U - ? -
76 HHSearch 84.8332% -88 - C1 -4I1V - ? -
8 PsiBlast_PDB 82.3537%-113 - C1 -1N3B - COAE_ECOLI -
78 HHSearch 81.0732%-126 - C1 -2IF2 - COAE_AQUAE -
79 HHSearch 80.9530%-106 - C1 -1UF9 - COAE_THET8 -
9 PsiBlast_PDB 80.6332% -77 - C1 -4I1U - ? -
10 PsiBlast_PDB 80.5732% -85 - C1 -4I1V 4.8 ?