@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XZK9: (2018-01-15 )
MMEFSMDMFRLDGKVALVTGAVYGIGFEIARSLATAGAKIVFNNLNQESVDEGIAHYKEAGIDAKGYVCDVTDEEAVQAMVQQIKEDVGSVDILVNNAGIIKRTPMIEMDAADFRQVIDVDLNAPFIVSKAVIPDMIEKGGGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGQYNIQCNGIGPGYIATPQTAPLRETQENGERHPFDQFIVGRTPAARWGEPIDLAGPSVFLASSASDFVNGHVLYVDGGILAYIGKQP

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAP_A_3(3O03)
?
[Raw transfer]



NAP_B_11(5U9P)
?
[Raw transfer]



NAD_D_5(4ZA2)
?
[Raw transfer]



NAD_D_16(2WDZ)
?
[Raw transfer]



GCO_A_4(3O03)
?
[Raw transfer]



GOL_A_7(4G81)
?
[Raw transfer]



TLA_A_6(5U9P)
?
[Raw transfer]



TLA_D_24(5U9P)
?
[Raw transfer]



EDO_B_10(4G81)
?
[Raw transfer]



EDO_D_5(4G81)
?
[Raw transfer]



EDO_B_22(3RRO)
FABG_VIBCH
[Raw transfer]



EDO_A_10(3RRO)
FABG_VIBCH
[Raw transfer]
3 PsiBlast_PDB 91.1877%-105 - C- -4Z9X - ? -
2 PsiBlast_PDB 90.6979%-116 - C1 -3O03 9.8 ?
1 PsiBlast_PDB 90.0779%-111 - C1 -3CXR - ? -
4 PsiBlast_PDB 88.5375%-119 - C1 -4U8G - ? -
27 PsiBlast_CBE 76.4143%-100 - C1 -5U9P 3.6 ?
29 PsiBlast_CBE 75.2543% -96 - C1 -5U9P 7.6 ?
7 PsiBlast_PDB 75.1943% -99 - C1 -5U9P 3.7 ?
28 PsiBlast_CBE 74.1743% -98 - C1 -5U9P - ? -
6 PsiBlast_PDB 73.3145% -96 - C1 -4IBO - ? -
151 HHSearch 73.0646% -92 - C1 -4IBO - ? -
22 PsiBlast_CBE 72.3944% -63 - C1 -4G81 2.3 ?
5 PsiBlast_PDB 72.3044% -65 - C1 -4G81 3.0 ?
23 PsiBlast_CBE 70.6444% -66 - C1 -4G81 2.5 ?
152 HHSearch 70.2946% -92 * C1 *4IBO - ? -
37 PsiBlast_CBE 67.7939%-104 - C1 -3UF0 - ? -
11 PsiBlast_PDB 67.6339%-104 - C1 -3UF0 - ? -
145 HHSearch 67.6041% -70 - C1 -4Z9Y - ? -
9 PsiBlast_PDB 67.5840% -73 - C1 -4ZA2 - ? -
72 PsiBlast_CBE 67.4636%-111 - C1 -1AHH - HDHA_ECOLI -
73 PsiBlast_CBE 67.2436%-112 - C1 -1AHH - HDHA_ECOLI -
47 PsiBlast_CBE 51.7936% -3 - C1 -3RRO 2.7 FABG_VIBCH
18 PsiBlast_PDB 50.0136% -2 - C1 -3RRO 2.7 FABG_VIBCH