@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XZL2: (2018-01-15 )
MFKGKARAYTNIALIKYWGKKNEELILPMNNSLSLTLDAFYTETEVIFSDSYMVDEFYLDGTLQDEKATKKVSQFLDLFRKEAGLSLKASVISQNFVPTAAGLASSASGLAALAGACNTALKLGLDDLSLSRFARRGSGSACRSIFGGFVEWEKGHDDLSSYAKPVPSDSFEDDLAMVFVLINDQKKEVSSRNGMRRTVETSSFYQGWLDSVEGDLYQLKQAIKTKDFQLLGETMERNGLKMHGTTLAAQPPFTYWSPDSLKAMDAVRQLRKQGIPCYFTMDAGPNVKVLVENSHLSEVQETFTKLFSKEQVITAHAGPGIAIIE

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

2P0_A_3(3QT6)
?
[Raw transfer]



FM0_A_3(3QT7)
?
[Raw transfer]



FM0_B_5(3QT8)
?
[Raw transfer]



FM0_A_3(3QT8)
?
[Raw transfer]



2P0_A_3(4DPY)
?
[Raw transfer]



FM0_B_4(3QT7)
?
[Raw transfer]



2P0_A_3(4DU8)
?
[Raw transfer]



DP6_A_3(4DU7)
?
[Raw transfer]



2P0_B_7(4DU8)
?
[Raw transfer]



2P0_B_4(3QT6)
?
[Raw transfer]



DP6_B_4(4DU7)
?
[Raw transfer]



2P0_B_4(4DPY)
?
[Raw transfer]



FM0_A_3(4DPU)
?
[Raw transfer]



DP6_A_2(5GMD)
DMD_SULSO
[Raw transfer]



DP6_A_2(5GME)
DMD_SULSO
[Raw transfer]



DP6_A_2(5GMD)
DMD_SULSO
[Raw transfer]



GOL_A_4(4DPX)
?
[Raw transfer]



GOL_A_5(4Z7C)
DMD_SULSO
[Raw transfer]



AGS_B_5(4DPT)
?
[Raw transfer]



FMT_A_5(4DPX)
?
[Raw transfer]



AGS_B_6(4DPU)
?
[Raw transfer]



FMT_B_8(4DPX)
?
[Raw transfer]



FMT_B_9(4DPX)
?
[Raw transfer]



ADP_A_3(5GME)
DMD_SULSO
[Raw transfer]



EDO_A_10(2GS8)
?
[Raw transfer]



EDO_A_6(2GS8)
?
[Raw transfer]



EDO_A_6(2GS8)
?
[Raw transfer]
30 PsiBlast_CBE 97.9557% -70 - C1 -4DPW - ? -
31 PsiBlast_CBE 97.8857% -69 - C1 -4DPW - ? -
34 PsiBlast_CBE 97.8357% -69 - C1 -4DPW - ? -
32 PsiBlast_CBE 97.3957% -71 - C1 -4DPW - ? -
36 PsiBlast_CBE 95.8257% -72 - C1 -4DPW - ? -
8 PsiBlast_PDB 95.5857% -71 - C1 -4DPX 3.2 ?
27 PsiBlast_CBE 95.4757% -68 - C1 -4DPU 4.8 ?
2 PsiBlast_PDB 95.4557% -72 - C1 -3QT6 7.1 ?
26 PsiBlast_CBE 95.2057% -72 - C1 -4DPX 2.9 ?
7 PsiBlast_PDB 95.0257% -71 - C1 -4DPU 6.9 ?
11 PsiBlast_PDB 94.9757% -73 - C1 -4DU8 7.0 ?
5 PsiBlast_PDB 94.6657% -73 - C1 -4DU7 7.2 ?
1 PsiBlast_PDB 94.6057% -74 - C1 -3QT5 - ? -
4 PsiBlast_PDB 94.5457% -74 - C1 -4DPT - ? -
33 PsiBlast_CBE 94.4557% -69 - C1 -4DPW - ? -
9 PsiBlast_PDB 94.3957% -69 - C1 -4DPY 7.2 ?
22 PsiBlast_CBE 94.3757% -67 - C1 -4DPT 5.7 ?
6 PsiBlast_PDB 94.2757% -74 - C1 -3QT8 7.4 ?
35 PsiBlast_CBE 93.9757% -70 - C1 -4DPW - ? -
29 PsiBlast_CBE 93.2857% -75 - C1 -4DU8 6.9 ?
23 PsiBlast_CBE 92.8957% -72 - C1 -3QT7 7.6 ?
3 PsiBlast_PDB 92.8657% -71 - C1 -3QT7 7.7 ?
25 PsiBlast_CBE 92.5557% -74 - C1 -4DPY 7.3 ?
28 PsiBlast_CBE 91.9457% -70 - C1 -3QT8 7.5 ?
21 PsiBlast_CBE 91.7457% -74 - C1 -4DU7 6.8 ?
24 PsiBlast_CBE 91.4657% -68 - C1 -3QT6 7.1 ?
43 HHSearch 72.1939% -19 - C1 -2GS8 2.3 ?
14 PsiBlast_PDB 69.1835% -1 - C1 -5GMD 7.3 DMD_SULSO
15 PsiBlast_PDB 67.9735% 0 - C1 -5GME 7.3 DMD_SULSO
45 HHSearch 63.4434% 11 - C1 -5GMD 7.2 DMD_SULSO
18 PsiBlast_PDB 62.4639% 20 - C1 -2GS8 3.0 ?