@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3Y064: (2018-01-19 )
MSDNQLLEVQNLHTGFRLKDDYYDAVDDVSFTLDKNEILAIVGESGCGKSTLATTIMGLLDPNNTKITGEILYNDLNLIDLNETLYNKIRGNDIGMIFQDPLSALNPLMRIEDQIKEGLSYHTKMNAEQRQARALELLEQVGIPNPARVGRQYPHELSGGMRQRVIIAIAIACKPPIVIADEPTTALDVTIQAQILDLLKDLQEETKTGIILITHDLGVVAEMADRVAVMYGGQFVEVAGVKELFDHPKHPYTRSLLNSIPQEGNHDAELHVIEGVVPSLKNMPRKGCRFAPRIPWIPASDHEEEPILHEVAPNHLVRCSCYKHFHFRDEKGEV

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_B_3(4FWI)
?
[Raw transfer]




ACP_A_4(5X40)
CBIO_RHOCB
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ACP_B_6(5X40)
CBIO_RHOCB
[Raw transfer]




ADP_B_2(2FF7)

[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




128_A_2(2PMK)

[Raw transfer]




12D_A_2(3B5J)

[Raw transfer]




ANP_A_6(4ZIR)
ECFA2_THEMA
[Raw transfer]




IPA_A_6(3TIF)
Y796_METJA
[Raw transfer]




78 HHSearch 84.0837% -70 - C1 -4FWI - ? -
1 PsiBlast_PDB 83.8937% -70 - C1 -4FWI 5.5 ?
33 PsiBlast_CBE 75.0833%-138 - C1 -3C41 - ? -
29 PsiBlast_CBE 74.6433%-137 - C1 -2OLK - ? -
24 PsiBlast_CBE 74.3933%-142 - C1 -3C4J - ? -
4 PsiBlast_PDB 74.3733%-141 - C1 -2OLJ - ? -
5 PsiBlast_PDB 74.3533%-142 - C1 -2OLK - ? -
30 PsiBlast_CBE 74.1433%-139 - C1 -2OLK - ? -
3 PsiBlast_PDB 74.0436%-127 - C1 -4U02 - ? -
99 Fugue 73.6229%-140 - C1 -3TUZ - METN_ECOLI -
80 HHSearch 73.3333%-150 * C1 *3TUI - METN_ECOLI -
2 PsiBlast_PDB 73.0736%-130 - C1 -4U00 6.3 ?
25 PsiBlast_CBE 72.3633%-141 - C1 -2Q0H - ? -
31 PsiBlast_CBE 72.3533%-136 - C1 -2OLK - ? -
7 PsiBlast_PDB 71.5533%-134 - C1 -2Q0H - ? -
8 PsiBlast_PDB 71.5133%-133 - C1 -3C4J - ? -
9 PsiBlast_PDB 71.4333%-131 - C1 -3C41 - ? -
6 PsiBlast_PDB 71.4133%-138 - C1 -2OUK - ? -
32 PsiBlast_CBE 71.2733%-136 - C1 -2OLJ - ? -
100 Fugue 69.3326%-115 - C1 -1OXS - ? -
34 PsiBlast_CBE 53.1433% -43 - C1 -3TIF 3.1 Y796_METJA