@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3Y0S4: (2018-01-22 )
MDVKGKNVFITGSTRGIGKAMALAFAKAGANIILNGRGEIPKEKIEEIEAFGVKCVGVSGDISDYEKAGQMIKEAEEKLGSIHVLVNNAGITNDKLVMRMDAEDFKKCLDINLIGTFNMTQHVLKKMMKQREGAIINLSSVSGLIGNIGQANYAASKAGVVGLTKSVAREAATRGITCNAIAPGFITTDMTEVLADKVKEQAEKQIPMQRFGQVEDIAQTAVFLAQNPYITGQVINVDGGLVMHG

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAP_C_6(4JRO)
?
[Raw transfer]



NAP_B_19(3RSH)
FABG_VIBCH
[Raw transfer]



NDP_C_12(4AG3)
FABG_PSEAE
[Raw transfer]



NDP_B_6(3SJ7)
?
[Raw transfer]



CAA_D_16(3VZS)
PHAB_CUPNH
[Raw transfer]



1PE_A_6(2PNF)
FABG_AQUAE
[Raw transfer]



1PE_B_5(2PNF)
FABG_AQUAE
[Raw transfer]



PG4_A_4(3SJ7)
?
[Raw transfer]



EDO_A_11(3RRO)
FABG_VIBCH
[Raw transfer]



PEG_A_3(3OSU)
FABG_STAAM
[Raw transfer]



EDO_B_22(3RRO)
FABG_VIBCH
[Raw transfer]



EDO_B_21(3RRO)
FABG_VIBCH
[Raw transfer]



PG4_B_7(3SJ7)
?
[Raw transfer]



PEG_B_17(3OSU)
FABG_STAAM
[Raw transfer]



PGE_B_24(3RRO)
FABG_VIBCH
[Raw transfer]



PEG_A_6(3OSU)
FABG_STAAM
[Raw transfer]



PGE_A_8(3RRO)
FABG_VIBCH
[Raw transfer]
47 PsiBlast_CBE 87.4642% -91 - C1 -3TZH - ? -
31 PsiBlast_CBE 86.4243% -89 - C1 -4I08 - FABG_VIBCH -
13 PsiBlast_PDB 85.0743%-103 - C1 -4WK6 - ? -
19 PsiBlast_PDB 83.0842% -95 - C1 -3TZK - ? -
15 PsiBlast_PDB 82.6043% -91 - C1 -3RRO 2.9 FABG_VIBCH
33 PsiBlast_CBE 82.4543% -91 - C1 -3RRO 3.0 FABG_VIBCH
32 PsiBlast_CBE 81.9843% -91 - C1 -3RSH 11.0 FABG_VIBCH
20 PsiBlast_PDB 81.4542% -89 - C1 -3U09 - FABG_VIBCH -
49 PsiBlast_CBE 80.9241% -95 - C1 -1Q7B - FABG_ECOLI -
27 PsiBlast_CBE 79.6243%-100 - C1 -4WK6 - ? -
28 PsiBlast_CBE 79.5143%-103 - C1 -4WK6 - ? -
14 PsiBlast_PDB 78.8243% -90 - C1 -3RSH - FABG_VIBCH -
52 PsiBlast_CBE 78.1041% -91 - C1 -1Q7B - FABG_ECOLI -
51 PsiBlast_CBE 77.8041% -92 - C1 -1Q7B - FABG_ECOLI -
50 PsiBlast_CBE 77.1441% -95 - C1 -1Q7B - FABG_ECOLI -
26 PsiBlast_CBE 76.5143%-107 - C1 -4WK6 - ? -
25 PsiBlast_CBE 75.7647% -2 - C1 -2PNF 1.9 FABG_AQUAE
100 PsiBlast_CBE 75.5842% -26 - C1 -4BNW - FABG_PSEAE -
91 PsiBlast_CBE 75.5542% -33 - C1 -4BNY - FABG_PSEAE -
90 PsiBlast_CBE 75.5042% -36 - C1 -4BNY - FABG_PSEAE -
6 PsiBlast_PDB 74.0547% -0 - C1 -2PNF 1.6 FABG_AQUAE
21 PsiBlast_CBE 68.1552% 9 - C1 -3SJ7 11.8 ?
1 PsiBlast_PDB 66.8252% 9 - C1 -3SJ7 1.8 ?
3 PsiBlast_PDB 64.4750% 14 - C1 -3OSU 2.5 FABG_STAAM