@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3Y1L0: (2018-01-26 )
MLRTEQLGFWYQDPQDALYKDVELNFEAGKMYAILGASGSGKTTFLSLISGLDAPKEGKVYYQDRSLNKIGLRSYRKNDVSIIFQAYNLLPYLSALDNVIAAMEITKTKQENYRQVALDRLARVGIDEILAKKQVTKLSGGQQQRVAIVRAICCEHQLIVADEPTGNLDETTSQDIVKLFQEIAHEQNRCIIIVTHEIEVAKSCDEVFELKNKKFQKIEV

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]



ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]



ATP_J_5(4YMV)
?
[Raw transfer]



ATP_J_5(4YMU)
?
[Raw transfer]



ATP_A_6(4YMV)
?
[Raw transfer]



ATP_A_7(4YMU)
?
[Raw transfer]



ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]



ADP_A_3(1F3O)
Y796_METJA
[Raw transfer]



ACP_A_4(4AYX)
ABCBA_HUMAN
[Raw transfer]
2 PsiBlast_PDB 67.5737% 32 - C1 -1F3O 5.8 Y796_METJA
5 PsiBlast_PDB 66.5338% -15 - C1 -2PCL - LOLD_AQUAE -
22 PsiBlast_CBE 66.3435% 29 - C1 -3TIF 5.4 Y796_METJA
4 PsiBlast_PDB 64.8038% -16 - C1 -2PCJ - LOLD_AQUAE -
3 PsiBlast_PDB 64.5635% 33 - C1 -3TIF - Y796_METJA -
1 PsiBlast_PDB 64.3135% 33 - C1 -1L2T - Y796_METJA -
21 PsiBlast_CBE 64.2835% 32 - C1 -1L2T 6.7 Y796_METJA
70 HHSearch 63.7027%-111 - C1 -2YYZ - ? -
34 PsiBlast_CBE 62.9031% -22 - C1 -3TUI - METN_ECOLI -
29 PsiBlast_CBE 61.9031% -32 - C1 -3TUZ - METN_ECOLI -
52 HHSearch 61.8926%-120 - C1 -3RLF - MALK_ECOLI -
16 PsiBlast_PDB 61.4131% -24 - C1 -3TUI - METN_ECOLI -
32 PsiBlast_CBE 61.3131% -28 - C1 -3TUI - METN_ECOLI -
45 Fugue 60.7728% 30 * C1 *3TUZ - METN_ECOLI -
31 PsiBlast_CBE 60.2731% -22 - C1 -3TUZ - METN_ECOLI -
14 PsiBlast_PDB 58.8834% 0 - C- -5NIL - ? -
13 PsiBlast_PDB 58.8834% 0 - C- -5NIK - ? -
64 HHSearch 58.8229% -7 - C1 -3DHW - METN_ECOLI -
66 HHSearch 58.0126%-125 - C1 -4TQU - ? -
30 PsiBlast_CBE 57.6931% -34 - C1 -3TUZ - METN_ECOLI -
24 PsiBlast_CBE 54.4534% -5 - C1 -4YMV 5.8 ?
8 PsiBlast_PDB 53.0234% -6 - C1 -4YMU 4.1 ?
25 PsiBlast_CBE 52.3234% -9 - C1 -4YMU 4.1 ?
9 PsiBlast_PDB 51.1234% -4 - C1 -4YMV 4.8 ?
41 PsiBlast_CBE 44.7235% -6 - C1 -1B0U 4.1 HISP_SALTY