@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3Y2V8: (2018-02-02 )
MNKIVEVQNVTKVYGKNNEKKTQALSGISFDVEKGEFIGIMGASGSGKSTLLNILSTLDKPTDGHIRINQKDVTTLKGNQLADFRANEIGFIFQDFNLLESLTAQENIAVPLSLQGVRPKEIKQRVQKIAERLSISHILESYPSEISGGQKQRVAAARALITQPTILLGDEPTGALDSKSARDLLDTMDELNTKDHVSILLVTHDPFSASYCQRILFIKDGGIHQEVKRGDQSRDSFYREILSILGNLEQ

Atome Classification :

(33 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]



ATP_J_5(4YMU)
?
[Raw transfer]



ATP_A_7(4YMU)
?
[Raw transfer]



ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]



ATP_A_5(1L2T)
Y796_METJA
[Raw transfer]



AGS_B_6(3C4J)
?
[Raw transfer]



ATP_J_5(4YMV)
?
[Raw transfer]



ATP_A_6(4YMV)
?
[Raw transfer]



ANP_J_5(3C41)
?
[Raw transfer]



AGS_A_4(3C4J)
?
[Raw transfer]



ADP_A_5(5L22)
?
[Raw transfer]



ADP_A_3(3TIF)
Y796_METJA
[Raw transfer]



ADP_A_3(1F3O)
Y796_METJA
[Raw transfer]



ANP_K_6(3C41)
?
[Raw transfer]



ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]



AT4_C_7(2OLK)
?
[Raw transfer]



AT4_D_8(2OLK)
?
[Raw transfer]



ADP_B_3(5L22)
?
[Raw transfer]



LMT_B_4(4MKI)
ECFA2_CALS4
[Raw transfer]



LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]
2 PsiBlast_PDB 93.8742% 0 - C- -5NIL - ? -
1 PsiBlast_PDB 93.8742% 0 - C- -5NIK - ? -
10 PsiBlast_PDB 84.2138%-135 - C1 -3TUZ - METN_ECOLI -
6 PsiBlast_PDB 83.4241% -98 - C1 -2PCJ - LOLD_AQUAE -
28 PsiBlast_CBE 82.8338%-122 - C1 -3TUI - METN_ECOLI -
129 HHSearch 82.7537%-122 - C1 -3DHW - METN_ECOLI -
11 PsiBlast_PDB 82.5038%-132 - C1 -3TUJ - METN_ECOLI -
27 PsiBlast_CBE 82.1538%-130 - C1 -3TUI - METN_ECOLI -
130 Fugue 82.0934%-111 - C1 -3TUZ - METN_ECOLI -
9 PsiBlast_PDB 81.9638%-126 - C1 -3TUI - METN_ECOLI -
25 PsiBlast_CBE 81.8438%-127 - C1 -3TUZ - METN_ECOLI -
24 PsiBlast_CBE 81.7438%-128 - C1 -3TUZ - METN_ECOLI -
7 PsiBlast_PDB 81.7041% -97 - C1 -2PCL - LOLD_AQUAE -
8 PsiBlast_PDB 81.1639%-125 - C1 -3DHW - METN_ECOLI -
131 Fugue 80.8035% -94 - C1 -1OXS - ? -
29 PsiBlast_CBE 80.3738%-123 - C1 -3TUI - METN_ECOLI -
26 PsiBlast_CBE 79.8738%-121 - C1 -3TUZ - METN_ECOLI -
15 PsiBlast_PDB 79.6736% -70 - C1 -1OXV - ? -
22 PsiBlast_CBE 78.7541% -24 - C1 -3TIF 6.3 Y796_METJA
5 PsiBlast_PDB 78.5141% -16 - C1 -1F3O 6.1 Y796_METJA
21 PsiBlast_CBE 78.0041% -29 - C1 -1L2T 6.6 Y796_METJA
4 PsiBlast_PDB 77.7741% -22 - C1 -3TIF 6.1 Y796_METJA
3 PsiBlast_PDB 77.1741% -23 - C1 -1L2T 6.5 Y796_METJA
36 PsiBlast_CBE 70.5235% -66 - C1 -4YMV 5.1 ?
35 PsiBlast_CBE 69.6735% -64 - C1 -4YMV 5.1 ?
37 PsiBlast_CBE 69.2935% -63 - C1 -4YMU 5.8 ?
20 PsiBlast_PDB 68.3335% -60 - C1 -4YMU 5.6 ?
91 PsiBlast_CBE 66.1932% -45 - C1 -3C41 6.9 ?
96 PsiBlast_CBE 61.6932% -23 - C1 -1B0U 5.8 HISP_SALTY
48 PsiBlast_CBE 59.1139% -19 - C1 -4MKI 3.9 ECFA2_CALS4
47 PsiBlast_CBE 58.6239% -19 - C1 -4MKI 2.0 ECFA2_CALS4
104 PsiBlast_CBE 48.3431% -32 - C1 -5L22 4.4 ?
105 PsiBlast_CBE 46.4931% -27 - C1 -5L22 4.6 ?