@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3Y365: (2018-02-03 )
MRIPHFHNKIIIFSVLINVKDTRRVGKNQTKNIFVKSIYKKIFLYNEGIRNGGAIMEIGVIGLGKMGLNLALNLKEHHHKVQGLDISSTAVSQARENDIPAYQEISEFLATFEQKKIIWLMLPAGEITENMLRKLFPKLGPGDIIIEGGNSYYKDSIRRAEEFQKNEIGYLDCGTSGGIEGARHQACLMIGGDKETFLSVEQLFKDVAIERGYLYAGASGSGHFLKMIHNGIEYGMMQAIGEGFQLVQKSEYAFDLEQVARVWNHGSVIRGWLMEIMEDQLNEHPNLSNYRGIVSASGEAKWTVETALEMAVPVPVIATSLFMRNLSQEEDSFSAKVVSALRNGFGGHEIVEKGE

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

6PG_A_3(3FWN)
6PGD_ECOLI
[Raw transfer]



6PG_B_4(2ZYA)
6PGD_ECOLI
[Raw transfer]



6PG_A_3(2W90)
?
[Raw transfer]



6PG_A_2(2IYO)
6PGD_LACLM
[Raw transfer]



6PG_A_3(2ZYA)
6PGD_ECOLI
[Raw transfer]



6PG_B_5(3FWN)
6PGD_ECOLI
[Raw transfer]



6PG_C_3(1PGP)
6PGD_SHEEP
[Raw transfer]



6PG_A_3(2W8Z)
?
[Raw transfer]



GLO_A_3(2ZYD)
6PGD_ECOLI
[Raw transfer]



POP_A_5(1PGN)
6PGD_SHEEP
[Raw transfer]



6PG_B_7(2W8Z)
?
[Raw transfer]



NDP_G_7(1PGO)
6PGD_SHEEP
[Raw transfer]



3PG_A_5(4GWK)
6PGD_HUMAN
[Raw transfer]



MES_A_4(4GWK)
6PGD_HUMAN
[Raw transfer]



MES_A_3(4GWG)
6PGD_HUMAN
[Raw transfer]
61 HHSearch 82.0433% 0 - C- -4GWG - 6PGD_HUMAN -
8 PsiBlast_PDB 76.7533% -4 - C4 -2ZYD - 6PGD_ECOLI -
10 PsiBlast_PDB 76.3133% -7 - C4 -2ZYG - ? -
7 PsiBlast_PDB 76.2533% -0 - C4 -2ZYA 3.9 6PGD_ECOLI
48 HHSearch 75.9433% -12 - C4 -2ZYD - 6PGD_ECOLI -
5 PsiBlast_PDB 74.2931% -5 - C4 -2IZ0 - 6PGD_LACLM -
30 PsiBlast_CBE 74.2333% -1 - C4 -2ZYA 4.1 6PGD_ECOLI
9 PsiBlast_PDB 73.5433% -0 - C4 -3FWN 3.3 6PGD_ECOLI
6 PsiBlast_PDB 73.3331% -1 - C4 -2IZ1 - 6PGD_LACLM -
29 PsiBlast_CBE 73.2533% -2 - C4 -2ZYD 3.4 6PGD_ECOLI
24 PsiBlast_CBE 73.2031% -6 - C4 -2IYP - 6PGD_LACLM -
27 PsiBlast_CBE 72.9331% -0 - C4 -2IZ0 - 6PGD_LACLM -
31 PsiBlast_CBE 72.7333% -3 - C4 -3FWN 4.2 6PGD_ECOLI
28 PsiBlast_CBE 72.6231% -2 - C4 -2IZ0 - 6PGD_LACLM -
23 PsiBlast_CBE 72.1731% -4 - C4 -2IYP - 6PGD_LACLM -
25 PsiBlast_CBE 71.9231% -2 - C4 -2IZ1 - 6PGD_LACLM -
26 PsiBlast_CBE 71.7331% -1 - C4 -2IZ1 - 6PGD_LACLM -
4 PsiBlast_PDB 71.4631% 1 - C4 -2IYP - 6PGD_LACLM -
43 HHSearch 71.2433% 15 - C4 -2P4Q - 6PGD1_YEAST -
45 HHSearch 70.9235% -4 - C4 -2W90 - ? -
3 PsiBlast_PDB 69.9131% 8 - C4 -2IYO 4.1 6PGD_LACLM
15 PsiBlast_PDB 68.6534% 17 - C4 -1PGN 4.3 6PGD_SHEEP
17 PsiBlast_PDB 68.3034% 19 - C4 -1PGP 3.3 6PGD_SHEEP
12 PsiBlast_PDB 68.2133% 14 - C4 -4GWK 3.0 6PGD_HUMAN
11 PsiBlast_PDB 68.0733% 14 - C4 -4GWG 3.0 6PGD_HUMAN
22 PsiBlast_CBE 63.8436% 27 - C4 -2W8Z 2.0 ?
2 PsiBlast_PDB 63.8436% 28 - C4 -2W8Z 2.7 ?
1 PsiBlast_PDB 63.6236% 30 - C4 -2W90 3.5 ?