@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3Y3G8: (2018-02-05 )
MAYKDIPKSVQKFMEDITQKCGDIHADWAKNFTAAFANTLLTTVKKQNDGTTFLLTGDIPAMWLRDSTAQVRPYLVIAKEDEELADMISGLVKKQFFYINIDPYANAFNEEANGAGHQTDHTKMNDWIWERKYEIDSLCYPIQLAYLLYKNTGKTDQFNQSFIEGIKKILDVFKTEQDHEHSPYTFVRDTTRKEDTLINDGRGAKTAFTGMTWSGFRPSDDTCRYGYLVPSNMFAVVVLGYVEEIFQTILDDKEIVQQTQKLKKEIQEGIQNHGRTVNQKGQTIYAYEVDGMGNATVMDDSNVPNLIAAPYLGYCSEQEEDYLQTRRTLLSKENPYFYEGKYAKGIGSSHTPEKYVWPIALAMEGMTTSDKSEKERILNLLVATDAGTHLMHEGFDVNNPENYTREWFSWANMMFCELVMDYFDIRVEK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

YDR_A_8(3QT9)
?
[Raw transfer]



DMJ_A_10(3QRY)
?
[Raw transfer]



DMJ_A_10(3QRY)
?
[Raw transfer]



DMJ_B_3(3QRY)
?
[Raw transfer]



MAN_A_2(5M7Y)
?
[Raw transfer]



MAN_A_2(5M7I)
?
[Raw transfer]



EDO_A_5(3QSP)
?
[Raw transfer]



EDO_B_15(3ON6)
?
[Raw transfer]



EDO_A_9(3ON6)
?
[Raw transfer]



BMA_A_3(5M7I)
?
[Raw transfer]



EDO_A_2(3QT3)
?
[Raw transfer]



EDO_A_2(3QT3)
?
[Raw transfer]



MAN_A_4(5M7Y)
?
[Raw transfer]



MAN_A_4(5M7Y)
?
[Raw transfer]



SUGAR_A_3(3QSP)
?
[Raw transfer]
-
SUGAR_B_8(3QSP)
?
[Raw transfer]
-
EDO_A_3(3P2C)
?
[Raw transfer]



EDO_A_3(3P2C)
?
[Raw transfer]
26 HHSearch 94.4359% -30 - C3 -3QRY 4.2 ?
1 PsiBlast_PDB 94.4360% -27 - C3 -3QPF - ? -
20 PsiBlast_CBE 94.3560% -27 - C3 -3QPF - ? -
2 PsiBlast_PDB 94.1460% -25 - C3 -3QRY 3.6 ?
19 PsiBlast_CBE 94.0060% -25 - C3 -3QRY 4.2 ?
18 PsiBlast_CBE 93.8860% -25 - C3 -3QSP 2.7 ?
3 PsiBlast_PDB 93.3660% -24 - C3 -3QSP 3.5 ?
25 HHSearch 89.0047% -27 - C3 -3QT3 2.4 ?
4 PsiBlast_PDB 88.3846% -26 - C3 -3QT3 2.4 ?
24 HHSearch 87.1047% -28 - C3 -5M7Y 2.7 ?
8 PsiBlast_PDB 86.7745% -26 - C3 -2NVP - ? -
6 PsiBlast_PDB 86.4346% -25 - C3 -5M7I 4.2 ?
5 PsiBlast_PDB 86.3046% -22 - C3 -3QT9 6.6 ?
7 PsiBlast_PDB 86.2146% -26 - C3 -5M7Y 4.5 ?
10 PsiBlast_PDB 81.7940% -6 - C3 -2P0V - ? -
22 HHSearch 81.3642% -2 * C3 *3ON6 2.4 ?
9 PsiBlast_PDB 80.4041% -2 - C3 -3ON6 3.6 ?
23 HHSearch 76.9042% 25 - C3 -3P2C 2.8 ?
11 PsiBlast_PDB 72.2543% 33 - C3 -3P2C 2.8 ?
41 HHSearch 45.9510% -19 - C3 -4WVA - ? -