@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : new_query: (2014-05-05 )
ITCGQVSSNLVPCFDYVRSDGPVPPACCNGIRTINGLAKTTPDRQAACNCLKSLAGSVSGVNPGNAESLPGKCGVNVPYKISTSTNCATVK

Atome Classification :

(20 SA) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------......--..--.---10........----20------------.----------------------.------------------.-----------..---....30........-----------40........50.--..-....-----.-------60--------.---------.----------.......--70........80........90--------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITCGQV--SS--N---LVPCFDYVRS----D-------------G----------------------P------------------V-----------PP---ACCNGIRTINGLAK-----------TTPDRQAACNCLK--SL-AGSV-----S-------G---------V---------N----------PGNAESL--PGKCGVNVPYKISTSTNCATVK--------
11 HHSearch 93.9977%-120 - C3 -2ALG NLTP1_PRUPE A:[2-92] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITCGQV--SS--S---LAPCIPYVRG----G-------------G----------------------A------------------V-----------PP---ACCNGIRNVNNLAR-----------TTPDRQAACNCLK--QL-SASV-----P-------G---------V---------N----------PNNAAAL--PGKCGVSIPYKISASTNCATVK--------
14 HHSearch 87.6857%-114 - C3 -1T12 - NLTP1_TOBAC A:[2-91] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITCGQV--TS--N---LAPCLAYLRN----T-------------G-----------------------------------------P-----------LG---RCCGGVKALVNSAR-----------TTEDRQIACTCLK--SA-AGAI-----S-------G---------I---------N----------LGKAAGL--PSTCGVNIPYKISPSTDCSKVQ--------
13 HHSearch 84.4957%-116 - C3 -1SIY - NLTP1_VIGRR A:[1-91] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------MTCGQV--QG--N---LAQCIGFLQK----G-------------G----------------------V------------------V-----------PP---SCCTGVKNILNSSR-----------TTADRRAVCSCLK--AA-AGAV-----R-------G---------I---------N----------PNNAEAL--PGKCGVNIPYKISTSTNCNSIN--------
31 SP3 83.0456%-114 - C3 -1FK5 NLTP_MAIZE A:[1-93] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------AISCGQV--AS--A---IAPCISYARG----Q-------------G----------------------SG-----------------P-----------SA---GCCSGVRSLNNAAR-----------TTADRRAACNCLK--NA-AAGV-----S-------G---------L---------N----------AGNAASI--PSKCGVSIPYTISTSTDCSRVN--------
16 HHSearch 77.5443%-120 - C3 -1BWO NLTP1_WHEAT A:[1-90] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDCGHV--DS--L---VRPCLSYVQG----G-------------P----------------------G------------------P-----------SG---QCCDGVKNLHNQAR-----------SQSDRQSACNCLK--GI-ARGI-----H-------N---------L---------N----------EDNARSI--PPKCGVNLPYTISLNIDCSRV---------
12 HHSearch 77.0056% -94 - C3 -1AFH - NLTP_MAIZE A:[2-93] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------ISCGQV--AS--A---IAPCISYARG----Q-------------G----------------------SG-----------------P-----------SA---GCCSGVRSLNNAAR-----------TTADRRAACNCLK--NA-AAGV-----S-------G---------L---------N----------AGNAASI--PSKCGVSIPYTISTSTDCSRVN--------
38 SP3 61.1818%-114 - C3 -1QPO - NADC_MYCTU A:[1-284] GLSDWELAAARAAIARGLDEDLRYGPDVTTLATVPASATTTASLVTREAGVVAGLDVALLTLNEVLGTNGYRVLDRVEDGARVPPGEALMTLEAQTRGLLTAERTMLNLVGHLSGIATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHV--AAAGS---VVDALRAVRN----A-------------A----------------------P------------------D-----------LPCEVEVDS-LEQLDAVLPEKPELILLDNFAVWQTQTAVQRRD--SR-APTVMLESSG-------G---------L---------S----------LQTAATY---AETGVDY---LAVGALTHSVRVLDIGLDM
23 HHSearch 60.3827%-127 - C3 -1BEA - ITRF_MAIZE A:[15-109] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------N--P---LPSCRWYVTSRTCGI-------------G----------------------PR-----------------LPWPEL------KR---RCCRELADI-------------------PAYCRCTALS--IL-MDGA-----IPPGPDAQLEGR------L---------EDLPGCPREVQRGFAATLVTEAECNLATI---------------------
25 HHSearch 59.4129%-122 - C3 -1SM7 - ? A:[13-101] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q--H---LRACQQWIRQQLA-G-------------SPFSENQWGPQQGP---------S------------------L-----------RE---QCCNELYQE-------------------DQVCVCPTLK--QA-AKSV-----RVQ-----GQ--------H---------GPFQSTRI---YQIAKNL--PNVCNMKQI---------------------
29 HHSearch 57.0027%-133 * C3 *1HSS - IAA1_WHEAT A:[15-105] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------P--A---LPACRPLLRL----QCN-----------G----------------------SQVPEA-------------V-----------LR---DCCQQLAHIS-------------------EWCRCGALY--SM-LDSM-----YKEH-----GAFPRCRREV---------V----------KLTAASI--TAVCRLPIVV--------------------
28 HHSearch 52.6621%-100 - C3 -2LVF - ? A:[16-101] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q--M---LSHCRMYMRQQME-E-------------S----------------------T------------------YQTMPRRGMEPHMS---ECCEQLEGM-------------------DESCRCEGLR--MM-MRMM-----QQKEM---Q---------PRGEQMRR--M----------MRLAENI--PSRCNLS-----------------------
33 SP3 52.5218%-114 - C3 -1QPO - NADC_MYCTU A:[116-284] -------------------------------------------------------------------------------------------------------------------IATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHV--AAAGS---VVDALRAVRN----A-------------A----------------------P------------------D-----------LPCEVEVDS-LEQLDAVLPEKPELILLDNFAVWQTQTAVQRRD--SR-APTV-----MLESSG--G---------L---------S----------LQTAATY---AETGVDY---LAVGALTHSVRVLDIGLDM
17 HHSearch 48.5429% -83 - C3 -2RKN DIRL1_ARATH A:[4-75] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------LCGMS--QD--E---LNECKPAVSK----E-------------NPT--------------------S------------------P-----------SQ---PCCTALQHA-------------------DFACLCGYKN--SPWLGS------F-------G---------V---------D----------PELASAL--PKQCGLANAP--------------------
30 HHSearch 47.5420% -86 - C3 -1W2Q - CONG_ARAHY A:[22-114] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RV--N---LKPCEQHIMQ----RIMG----------EQE--------------------QYDSYDIRSTRSSD-----Q-----------QQ---RCCDELNEME----------------N-TQGCMCEALQ--QI-MENQ-----C-------DRLQD-----R---------QMVQQF-----KRELMSL--PQQCNFRAP---------------------
24 HHSearch 46.4822% -77 - C3 -1PSY - 2SS_RICCO A:[25-121] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------K--D---LSSCERYLRQ----SSSRR---------S----------------------TGEEVLRMPGDENQQQESQQ-----------LQ---QCCNQVKQV-------------------RDECQCEAIK--YI-AEDQ-----IQQG----Q---------LHGEESER--V----------AQRAGEI--VSSCGV--RCMRQ-----------------
2 Fugue 45.2528% -66 - C3 -2RKN DIRL1_ARATH A:[1-77] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------AIDLCGMS--QD--E---LNECKPAVSK----E-------------N----------------------P------------------T-----------SPSQ-PCCTALQHA-------------------DFACLCGYKN--SP-WLGS-----F-------G---------V---------D----------PELASAL--PKQCGLANA------PTC------------
22 HHSearch 45.1522% -98 - C3 -1B1U - IAAT_ELECO A:[15-109] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------N--P---LDSCRWYVSTRTCGV-------------G----------------------PRLATQE------------M-----------KA---RCCRQLEAI-------------------PAYCRCEAVR--IL-MDGV-----VTPS----GQHEGRLLQDLPGCPRQVQRA----------FAPKLVT--EVECNLATIH--------------------
5 Fugue 42.7921% -15 - C3 -1PSY - 2SS_RICCO A:[1-125] ----------------------------------------------------------------------------------------------------------------------------------------------------------AEFMESKGEREGSSSQQCRQEVQRK--D---LSSCERYLRQ----S-------------SSRRSTGEEVLRMPGDENQQQESQ------------------Q-----------LQ---QCCNQVKQVRDECQ-----------CEAIKYIAEDQIQQGQL-HGEE-----S-------E---------R---------V----------AQRAGEI--VSSCGVRCMRQTRTN---------------
9 Fugue 42.1420% -91 - C3 -1S6D - 2SS8_HELAN A:[1-103] -----------------------------------------------------------------------------------------------------------------------------------------------------------------PYGRGRTESGCYQQ--ME--EAEMLNHCGMYLMK----NLGERSQVSPRMREE----------------------D------------------H-----------KQ---LCCMQLKNL-------------------DEKCMCPAIM--MM-LNEP-----M-------W---------I---------RMRDQV-----MSMAHNL--PIECNL-------MSQPCQM----------
26 HHSearch 41.1822% -76 - C3 -3OB4 - ? A:[427-485] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------H-----------QE---RCCNELNEFEN-----------------NQRCMCEALQ--QI-MENQSDRL-Q-------G---------R---------QQEQQF-----KRELRNL--PQQCGLRAP---------------------


User Run . : Multi Template Modeling Result:

(2 SA) .........10........20........30........40........50........60........70........80........90
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ITCGQVSSNLVPCFDYVRSDGPVPPACCNGIRTINGLAKTTPDRQAACNCLKSLAGSVSGVNPGNAESLPGKCGVNVPYKISTSTNCATVK
41 94.20100%-133 - C- -M041 - A:[1-92] ITCGQVSSNLVPCFDYVRSDGPVPPACCNGIRTINGLAKTTPDRQAACNCLKSLAGSVSGVNPGNAESLPGKCGVNVPYKISTSTNCATVK
48 93.22100%-113 - C- -M048 - A:[1-313] ITCGQVSSNLVPCFDYVRSDGPVPPACCNGIRTINGLAKTTPDRQAACNCLKSLAGSVSGVNPGNAESLPGKCGVNVPYKISTSTNCATVK