@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Wbm0266: (2015-11-29 )
MSFFFKRTFGSINKKIIKSFRKIVEQINALETKMQSLSDEELADKTEEFKRELKNGKTLNDLLVPAFAVVREASRRFLNMRHFDVQLIGGMVLHNGMVSEMKTGEGKTLVATLAAYLNSLEGKGVHVVTVNDYLAKRDTEWMSKLYNSLGVSVAFITNDLTDEERKEAYSADIVYSTNNELAFDYLRDNMKFSREDMVQRGFNYAIVDEVDSILIDEARTPLIISGPVEENNQIYKHIDKIVTKLVDSDYEVDEKGRAVFLTEDGISQVEELLRSYNLISEKSSLYDAGNMIMTHYIDQALRAHKLFTADKDYIVKDGKVVIIDEFTGRMMEGRRYSDGLHQALEAKENLEIQYENQTLASVTFQNYFRMYNKLSGMTGTAATEAEELRDIYRLNVVKIPTNVTVKRIDVDDEIYGTEKEKFNAVLKFIKECHKRLQPVLVGTVSIENSEKLSALLRNHFLRHSVLNARYHEQEAYIIAQAGVPGNITIATNMAGRGTDIQLGGNAEMIAKVELKKIKNADEREKKYQEIIERVKRDKEIAMKAGGLCVIGTERHESRRIDDQLRGRSGRQGDPGLSKFFLSLEDDLMRIFGSDRMRSFLKRVGLKNNEAIHHPWINKALEKAQKKVEARNYDVRKSLLKFDDVINNQRKVIFEQRNHILGNEINDLFEVYSEVNKSVMESIVQGGYYEDYVEDIAKEFHIRYGITLDKKDLAKFLNKQEALDYINGKVKEFFTEKEKYFNGQQTTDLWNTIVKQVMIMTLDHLWREHLSILESLRQSIGLRAMGQKDPLNEFKREAFLIFECMLERGKELTIHRLAHFKLVDNQEVGGRLHPTRKDNLPKVSRNDKCPCNSGKKYKHCHGAVTVMN

Atome Classification :

(20 SA) .........10.......-.20........30........40........50..---.---.....60........70........80........90........100.......110.......120.......130.......140.......150......--------------------------------------------------.160.......170.......180.......190.......200-.---........210.......220.......230.......240...-.-------------...-------250.......260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390.......400.......410.......420.......430.......440.......450.....------------------------------------------------------------------------.----------------------------------------------------------------------------.460----.......470.......480.......490.......500.-......510--------------------------...-----..-----..-------------------------------.520--.........530.....-----..540--.........550.......560.......570.......580.......590.......600.......610.......620.......630.......640.......650.......660-...--...--...----670----.----.----.----....680..--.---------...-.690....-------.----....700.--.....---.--710-.---...--...--720------.......730.......740.......750.......760.......770.......780.......790.......800..--------------------.....810.......820.......830.......840.......850.......860.....
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MSFFFKRTFGSINKKIIK-SFRKIVEQINALETKMQSLSDEELADKTEEFKREL---K---NGKTLNDLLVPAFAVVREASRRFLNMRHFDVQLIGGMVLHNGMVSEMKTGEGKTLVATLAAYLNSLEGKGVHVVTVNDYLAKRDTEWMSKLYNSLGVSVAFITN--------------------------------------------------DLTDEERKEAYSADIVYSTNNELAFDYLRDNMKFSREDMVQR---G---FNYAIVDEVDSILIDEARTPLIISGPVEENNQIYKHIDKIVTKL-V-------------DSD-------YEVDEKGRAVFLTEDGISQVEELLRSYNLISEKSSLYDAGNMIMTHYIDQALRAHKLFTADKDYIVKDGKVVIIDEFTGRMMEGRRYSDGLHQALEAKENLEIQYENQTLASVTFQNYFRMYNKLSGMTGTAATEAEELRDIYRLNVVKIPTNVTVKRIDVDDEIYGTEKEKFNAVLKFIKECHKRLQPVLVGTVSIENSEKLSALLR------------------------------------------------------------------------N----------------------------------------------------------------------------HFLR----HSVLNARYHEQEAYIIAQAGVPGNITIATNMAGRGTDIQLG-GNAEMIAK---------------------------VEL-----KK-----IK-------------------------------NA----DEREKKYQEIIERVKRD-----KEI----AMKAGGLCVIGTERHESRRIDDQLRGRSGRQGDPGLSKFFLSLEDDLMRIFGSDRMRSFLKRVGLKNNEAIHHPWINKALEKAQKKVEARNYDVRKSLLKFDDVINNQRKVIFEQRNHIL---GNE--IND--LFE----VYS----E----V----N----KSVMESIVQ--G---------GYY-ED--YVED-------I----AKEFHIRY--GITLD---K--KDL-A---KFL--NKQ--EAL------DYINGKVKEFFTEKEKYFNGQQTTDLWNTIVKQVMIMTLDHLWREHLSILESLRQSIGLRAMGQKDPLNEFKREAFLIFECM--------------------LERGKELTIHRLAHFKLVDNQEVGGRLHPTRKDNLPKVSRNDKCPCNSGKKYKHCHGAVTVMN
48 Fugue 91.1949% -68 - C2 -2IPC - SECA_THET8 A:[1-939] MLGLLRRLFDNNEREIAR-YYKQVVEPVNRLEAEVEKLPD--LAAAYRELKEKH---E---KGASLDELLPMAFALTRESAKRYLGMRHFDVQLIGGAVLHEGKIAEMKTGEGKTLVATLAVALNALTGKGVHVVTVNDYLARRDAEWMGPVYRGLGLSVGVIQH--------------------------------------------------ASTPAERRKAYLADVTYVTNSELGFDYLRDNMAISPDQLVLR---HDHPLHYAIIDEVDSILIDEARTPLIISGPAEKATDLYYKMAEIAKKL-ERGLPAEPGVRKEPTGD-------YTVEEKNRSVHLTLQGIAKAEKLL-------GIEGLFSPENMELAHMLIQAIRAKELYHRDRDYIVQDGQVIIVDEFTGRLMPGRRYGEGLHQAIEAKEGVRIERENQTLATITYQNFFRLYEKRAGMTGTAKTEEKEFQEIYGMDVVVVPTNRPVIRKDFPDVVYRTEKGKFYAVVEEIAEKYERGQPVLVGTISIEKSERLSQMLKEPRLYLPRLEMRLELFKKASQKQQGPEWERLRKLLERPAQLKDEDLAPFEGLIPPKGNLRTAWEGLKRAVHTL----------------------------------------------------------------------------AVLRQGIPHQVLNAKHHAREAEIVAQAGRSKTVTIATNMAGRGTDIKLG-GNPEYLAAALLEKEGFDRYEWKVELFIKKMVAGKEEEA-----RA-----LA-------------------------------QELGIREELLERIREIREECKQD-----EER----VRALGGLFIIGTERHESRRIDNQLRGRAGRQGDPGGSRFYVSFDDDLMRLFASDRVIAMLDRMGFDDSEPIEHPMVTRSIERAQKRVEDRNFAIRKQLLQFDDVLSRQREVIYAQRRLILLGKDEE--VKEA-AIG----MVE----E----T----V----ASLAENFLN--P---------EVHPED--WDLE-------G----LKATLLDT--APQLQ---D--FPF-A---ELRALKAE--EAV------ERLVEAALKAYEAREAELS----PPLMRAVERFVILNVVDNAWKEHLHNLDVLRQGIFLRGYGQKDPFQEYKIEATRLFNEM--------------------VAFIKSEVAKFLFRLKVE---------------------------------------------
8 PsiBlast_PDB 90.7547% -76 - C2 -1NL3 - SECA1_MYCTU A:[12-827] --------------RMVK-RLKKVADYVGTLSDDVEKLTDAELRAKTDEFKRRLADQK---NPETLDDLLPEAFAVAREAAWRVLDQRPFDVQVMGAAALHLGNVAEMKTGEGKTLTCVLPAYLNALAGNGVHIVTVNDYLAKRDSEWMGRVHRFLGLQVGVILA--------------------------------------------------TMTPDERRVAYNADITYGTNNEFGFDYLRDNMAHSLDDLVQR---G---HHYAIVDEVDSILIDEARTPLIISGPADGASNWYTEFARLAPLMEK-------------DVH-------YEVDLRKRTVGVHEKGVEFVEDQLGIDNL-------YEAANSPLVSYLNNALKAKELFSRDKDYIVRDGEVLIVDEFTGRVLIGRRYNEGMHQAIEAKEHVEIKAENQTLATITLQNYFRLYDKLAGMTGTAQTEAAELHEIYKLGVVSIPTNMPMIREDQSDLIYKTEEAKYIAVVDDVAERYAKGQPVLIGTTSVERSEYLSRQFT------------------------------------------------------------------------K----------------------------------------------------------------------------RRIP----HNVLNAKYHEQEATIIAVAGRRGGVTVATNMAGRGTDIVLG-GNVDFLTD---------------------------QRL-----RERGLDPVE-------------------------------TP----EEYEAAWHSELPIVKEEASKEAKEV-----IEAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRRFNGAALETLLTRLNLPDDVPIEAKMVTRAIKSAQTQVEQQNFEVRKNVLKYDEVMNQQRKVIYAERRRIL---EGE----N--LKD----QAL----D----M----V----RDVITAYVD--G---------ATG-EG--YAEDWDLDALWT----ALKTLYPV--GITADSLT-----------------RE--ELL------EALLKDAERAYAAREAELEEIAGEGAMRQLERNVLLNVIDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFMAM--------------------LDGMKEESVGFLFNVTV----------------------------------------------
28 HHSearch 90.2846% -74 - C2 -1NKT SECA1_MYCTU A:[30-865] --DILSKLLRLGEGRMVK-RLKKVADYVGTLSDDVEKLTDAELRAKTDEFKRRL---ADQKNPETLDDLLPEAFAVAREAAWRVLDQRPFDVQVMGAAALHLGNVAEMKTGEGKTLTCVLPAYLNALAGNGVHIVTVNDYLAKRDSEWMGRVHRFLGLQVGVILA--------------------------------------------------TMTPDERRVAYNADITYGTNNEFGFDYLRDNMAHSLDDLVQR---G---HHYAIVDEVDSILIDEARTPLIISGPADGASNWYTEFARLAPLMEK-------------DVH-------YEVDLRKRTVGVHEKGVEFVEDQLG------I-DNLYEAANSPLVSYLNNALKAKELFSRDKDYIVRDGEVLIVDEFTGRVLIGRRYNEGMHQAIEAKEHVEIKAENQTLATITLQNYFRLYDKLAGMTGTAQTEAAELHEIYKLGVVSIPTNMPMIREDQSDLIYKTEEAKYIAVVDDVAERYAKGQPVLIGTTSVERSEYLSRQFT------------------------------------------------------------------------K----------------------------------------------------------------------------RRIP----HNVLNAKYHEQEATIIAVAGRRGGVTVATNMAGRGTDIVLG-GNVDFLTD---------------------------QRLRERGLDP-----VE-------------------------------TPEEYEAAWHSELPIVKEEASKE-----AKE----VIEAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRRFNGAALETLLTRLNLPDDVPIEAKMVTRAIKSAQTQVEQQNFEVRKNVLKYDEVMNQQRKVIYAERRRIL---EGE----N--LKD----QAL----D----M----VRDVITAYVDGATGE-G---------YAE-DW--DLDA-------L----WTALKTLY--PVGIT---A--DSL-T--------------LL------EALLKDAERAYAAREAELEEIAGEGAMRQLERNVLLNVIDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFMAM--------------------LDGMKEESVGFLFNVTV----------------------------------------------
21 PsiBlast_CBE 90.1350% -82 - C2 -2FSI SECA_ECOLI B:[3-828] ---------GSRNDRTLR-RMRKVVNIINAMEPEMEKLSDEELKGKTAEFRARL---E---KGEVLENLIPEAFAVVREASKRVFGMRHFDVQLLGGMVLNERCIAEMRTGEGKTLTATLPAYLNALTGKGVHVVTVNDYLAQRDAENNRPLFEFLGLTVGINLP--------------------------------------------------GMPAPAKREAYAADITYGTNNEYGFDYLRDNMAFSPEERVQR---K---LHYALVDEVDSILIDEARTPLIISGPAEDSSEMYKRVNKIIPHL-IRQ--------------------------------------VLIEELLVKEGIMDEGESLYSPANIMLMHHVTAALRAHA------------------------------------------------NENQTLASITFQNYFRLYEKLAGMTGTADTEAFEFSSIYKLDTVVVPTNRPMIRKDLPDLVYMTEAEKIQAIIEDIKERTAKGQPVLVGTISIEKSELVSNELT------------------------------------------------------------------------K----------------------------------------------------------------------------AGIK----HNVLNAKFHANEAAIVAQAGYPAAVTIATNMAGRGTDIVLG-GSWQ-------------------------------AEV-----AA-----LE-------------------------------NP----T------AEQIEKIKAD-----WQVRHDAVLEAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDALMRIFASDRVSGMMRKLGMKPGEAIEHPWVTKAIANAQRKVESRNFDIRKQLLEYDDVANDQRRAIYSQRNELL-----D--VSD--VSE----TIN----S----I----R----EDVFKATID--A---------YIP-PQ--SLEE-------MWDIPGLQERLKN--DFDLD---L--P-I-A---EWL--DKE--PELHEETLRERILAQSIEVYQRKEEVVGAE----MMRHFEKGVMLQTLDSLWKEHLAAMDYLRQGIHLRGYAQKDPKQEYKRESFSMFAAM--------------------LESLKYEVISTLSKVQVRMPEE-----------------------------------------
26 HHSearch 89.9849% -64 * C2 *2IPC - SECA_THET8 A:[1-939] MLGLLRRLF-DNNEREIARYYKQVVEPVNRLEAEVEKLPD--LAAAYRELKEKH---E---KGASLDELLPMAFALTRESAKRYLGMRHFDVQLIGGAVLHEGKIAEMKTGEGKTLVATLAVALNALTGKGVHVVTVNDYLARRDAEWMGPVYRGLGLSVGVIQH--------------------------------------------------ASTPAERRKAYLADVTYVTNSELGFDYLRDNMAISPDQLVLRHDHP---LHYAIIDEVDSILIDEARTPLIISGPAEKATDLYYKMAEIAKKL-ERGLPAEPGVRKEPTGD-------YTVEEKNRSVHLTLQGIAKAEKLLG------I-EGLFSPENMELAHMLIQAIRAKELYHRDRDYIVQDGQVIIVDEFTGRLMPGRRYGEGLHQAIEAKEGVRIERENQTLATITYQNFFRLYEKRAGMTGTAKTEEKEFQEIYGMDVVVVPTNRPVIRKDFPDVVYRTEKGKFYAVVEEIAEKYERGQPVLVGTISIEKSERLSQMLK------------------------------------------------------------------------EPRLYLPRLEMRLELFKKASQKQQGPEWERLRKLLERPAQLKDEDLAPFEGLIPPKGNLRTAWEGLKRAVHTLAVLRQGIP----HQVLNAKHHAREAEIVAQAGRSKTVTIATNMAGRGTDIKLG-GNPEYLAA---------------------------ALL-----EK-----EGFDRYEWKVELFIKKMVAGKEEEARALAQELGIR----EELLERIREIREECKQD-----EER----VRALGGLFIIGTERHESRRIDNQLRGRAGRQGDPGGSRFYVSFDDDLMRLFASDRVIAMLDRMGFDDSEPIEHPMVTRSIERAQKRVEDRNFAIRKQLLQFDDVLSRQREVIYAQRRLIL---LGK----DEEVKE----AAI----GMVEET----V----ASLAENFLNPEV---------HPE-DW--DLEG-------L----KATLLDTA--PQLQD---FPFAEL-----RAL--KAE--EAV------ERLVEAALKAYEAREAEL----SPPLMRAVERFVILNVVDNAWKEHLHNLDVLRQGIFLRGYGQKDPFQEYKIEATRLFNEM--------------------VAFIKSEVAKFLFRLKVE---------------------------------------------
7 PsiBlast_PDB 89.9247% -75 - C2 -1NKT SECA1_MYCTU A:[42-857] --------------RMVK-RLKKVADYVGTLSDDVEKLTDAELRAKTDEFKRRLADQK---NPETLDDLLPEAFAVAREAAWRVLDQRPFDVQVMGAAALHLGNVAEMKTGEGKTLTCVLPAYLNALAGNGVHIVTVNDYLAKRDSEWMGRVHRFLGLQVGVILA--------------------------------------------------TMTPDERRVAYNADITYGTNNEFGFDYLRDNMAHSLDDLVQR---G---HHYAIVDEVDSILIDEARTPLIISGPADGASNWYTEFARLAPLMEK-------------DVH-------YEVDLRKRTVGVHEKGVEFVEDQLGIDNL-------YEAANSPLVSYLNNALKAKELFSRDKDYIVRDGEVLIVDEFTGRVLIGRRYNEGMHQAIEAKEHVEIKAENQTLATITLQNYFRLYDKLAGMTGTAQTEAAELHEIYKLGVVSIPTNMPMIREDQSDLIYKTEEAKYIAVVDDVAERYAKGQPVLIGTTSVERSEYLSRQFT------------------------------------------------------------------------K----------------------------------------------------------------------------RRIP----HNVLNAKYHEQEATIIAVAGRRGGVTVATNMAGRGTDIVLG-GNVDFLTD---------------------------QRL-----RERGLDPVE-------------------------------TP----EEYEAAWHSELPIVKEEASKEAKEV-----IEAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRRFNGAALETLLTRLNLPDDVPIEAKMVTRAIKSAQTQVEQQNFEVRKNVLKYDEVMNQQRKVIYAERRRIL---EGE----N--LKD----QAL----D----M----V----RDVITAYVD--G---------ATG-EG--YAEDWDLDALWT----ALKTLYPV--GITADSLT----------------------LL------EALLKDAERAYAAREAELEEIAGEGAMRQLERNVLLNVIDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFMAM--------------------LDGMKEESVGFLFNVTV----------------------------------------------
22 PsiBlast_CBE 89.8047% -78 - C2 -1NKT SECA1_MYCTU B:[42-857] --------------RMVK-RLKKVADYVGTLSDDVEKLTDAELRAKTDEFKRRLADQK---NPETLDDLLPEAFAVAREAAWRVLDQRPFDVQVMGAAALHLGNVAEMKTGEGKTLTCVLPAYLNALAGNGVHIVTVNDYLAKRDSEWMGRVHRFLGLQVGVILA--------------------------------------------------TMTPDERRVAYNADITYGTNNEFGFDYLRDNMAHSLDDLVQR---G---HHYAIVDEVDSILIDEARTPLIISGPADGASNWYTEFARLAPLMEK-------------DVH-------YEVDLRKRTVGVHEKGVEFVEDQLGIDNL-------YEAANSPLVSYLNNALKAKELFSRDKDYIVRDGEVLIVDEFTGRVLIGRRYNEGMHQAIEAKEHVEIKAENQTLATITLQNYFRLYDKLAGMTGTAQTEAAELHEIYKLGVVSIPTNMPMIREDQSDLIYKTEEAKYIAVVDDVAERYAKGQPVLIGTTSVERSEYLSRQFT------------------------------------------------------------------------K----------------------------------------------------------------------------RRIP----HNVLNAKYHEQEATIIAVAGRRGGVTVATNMAGRGTDIVLG-GNVDFLTD---------------------------QRL-----RERGLDPVE-------------------------------TP----EEYEAAWHSELPIVKEEASKEAKEV-----IEAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRRFNGAALETLLTRLNLPDDVPIEAKMVTRAIKSAQTQVEQQNFEVRKNVLKYDEVMNQQRKVIYAERRRIL---EGE----N--LKD----QAL----D----M----V----RDVITAYVD--G---------ATG-EG--YAEDWDLDALWT----ALKTLYPV--GITADSLT----------------------LL------EALLKDAERAYAAREAELEEIAGEGAMRQLERNVLLNVIDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFMAM--------------------LDGMKEESVGFLFNVTV----------------------------------------------
4 PsiBlast_PDB 89.4250% -74 - C2 -2VDA - SECA_ECOLI A:[10-831] --------FGSRNDRTLR-RMRKVVNIINAMEPEMEKLSDEELKGKTAEFRARL---E---KGEVLENLIPEAFAVVREASKRVFGMRHFDVQLLGGMVLNERCIAEMRTGEGKTLTATLPAYLNALTGKGVHVVTVNDYLAQRDAENNRPLFEFLGLTVGINLP--------------------------------------------------GMPAPAKREAYAADITYGTNNEYGFDYLRDNMAFSPEERVQR---K---LHYALVDEVDSILIDEARTPLIISGPAEDSSEMYKRVNKIIPHL-IRQEKE--------DSETFQGEGHFSVDEKSRQVNLTERGLVLIEELLVKEGIMDEGESLYSPANIMLMHHVTAALRAHALFTRDVDYIVKDGEVIIVDEHTGRTMQGRRWSDGLHQAVEAKEGVQIQNENQTLASITFQNYFRLYEKLAGMTGTADTEAFEFSSIYKLDTVVVPTNRPMIRKDLPDLVYMTEAEKIQAIIEDIKERTAKGQPVLVGTISIEKSELVSNELT------------------------------------------------------------------------K----------------------------------------------------------------------------AGIK----HNVLNAKFHANEAAIVAQAGYPAAVTIATNMAGRGTDIVLG-GSWQ-------------------------------AEV-----AA-----LE-------------------------------NP----T------AEQIEKIKAD-----WQVRHDAVLEAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDALMRIFASDRVSGMMRKLGMKPGEAIEHPWVTKAIANAQRKVESRNFDIRKQLLEYDDVANDQRRAIYSQRNELL-----D--VSD--VSE----TIN----S----I----R----EDVFKATID--A---------YIP-PQ--SLEE-------MWDIPGLQERLKN--DFDLD---L--P-I-A---EWL--DKE--PELHEETLRERILAQSIEVYQRKEEVVGAE----MMRHFEKGVMLQTLDSLWKEHLAAMDYLRQGIHLRGYAQKDPKQEYKRESFSMFAAM--------------------LESLKYEVISTLSKVQVRMPEE-----------------------------------------
2 PsiBlast_PDB 89.1350% -80 - C2 -2FSH SECA_ECOLI A:[5-828] -----------RNDRTLR-RMRKVVNIINAMEPEMEKLSDEELKGKTAEFRARL---E---KGEVLENLIPEAFAVVREASKRVFGMRHFDVQLLGGMVLNERCIAEMRTGEGKTLTATLPAYLNALTGKGVHVVTVNDYLAQRDAENNRPLFEFLGLTVGINLP--------------------------------------------------GMPAPAKREAYAADITYGTNNEYGFDYLRDNMAFSPEERVQR---K---LHYALVDEVDSILIDEARTPLIISGPAEDS----------------------------------------------------------------------------------------------------------------------------------------------QNENQTLASITFQNYFRLYEKLAGMTGTADTEAFEFSSIYKLDTVVVPTNRPMIRKDLPDLVYMTEAEKIQAIIEDIKERTAKGQPVLVGTISIEKSELVSNELT------------------------------------------------------------------------K----------------------------------------------------------------------------AGIK----HNVLNAKFHANEAAIVAQAGYPAAVTIATNMAGRGTDIVLG-GSWQ-------------------------------AEV-----AA-----LE-------------------------------NP----T------AEQIEKIKAD-----WQVRHDAVLEAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDALMRIFASDRVSGMMRKLGMKPGEAIEHPWVTKAIANAQRKVESRNFDIRKQLLEYDDVANDQRRAIYSQRNELL-----D--VSD--VSE----TIN----S----I----R----EDVFKATID--A---------YIP-PQ--SLEE-------MWDIPGLQERLKN--DFDLD---L--P-I-A---EWL--DKE--PELHEETLRERILAQSIEVYQRKEEVVGAE----MMRHFEKGVMLQTLDSLWKEHLAAMDYLRQGIHLRGYAQKDPKQEYKRESFSMFAAM--------------------LESLKYEVISTLSKVQVRMPEE-----------------------------------------
3 PsiBlast_PDB 88.9250% -78 - C2 -2FSI SECA_ECOLI A:[5-828] -----------RNDRTLR-RMRKVVNIINAMEPEMEKLSDEELKGKTAEFRARL---E---KGEVLENLIPEAFAVVREASKRVFGMRHFDVQLLGGMVLNERCIAEMRTGEGKTLTATLPAYLNALTGKGVHVVTVNDYLAQRDAENNRPLFEFLGLTVGINLP--------------------------------------------------GMPAPAKREAYAADITYGTNNEYGFDYLRDNMAFSPEERVQR---K---LHYALVDEVDSILIDEARTPLIISGPAEDS----------------------------------------------------------------------------------------------------------------------------------------------QNENQTLASITFQNYFRLYEKLAGMTGTADTEAFEFSSIYKLDTVVVPTNRPMIRKDLPDLVYMTEAEKIQAIIEDIKERTAKGQPVLVGTISIEKSELVSNELT------------------------------------------------------------------------K----------------------------------------------------------------------------AGIK----HNVLNAKFHANEAAIVAQAGYPAAVTIATNMAGRGTDIVLG-GSWQ-------------------------------AEV-----AA-----LE-------------------------------NP----T------AEQIEKIKAD-----WQVRHDAVLEAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDALMRIFASDRVSGMMRKLGMKPGEAIEHPWVTKAIANAQRKVESRNFDIRKQLLEYDDVANDQRRAIYSQRNELL-----D--VSD--VSE----TIN----S----I----R----EDVFKATID--A---------YIP-PQ--SLEE-------MWDIPGLQERLKN--DFDLD---L--P-I-A---EWL--DKE--PELHEETLRERILAQSIEVYQRKEEVVGAE----MMRHFEKGVMLQTLDSLWKEHLAAMDYLRQGIHLRGYAQKDPKQEYKRESFSMFAAM--------------------LESLKYEVISTLSKVQVRMPEE-----------------------------------------
29 HHSearch 88.3151% -77 - C2 -2FSF - SECA_ECOLI A:[13-834] -----------RNDRTLR-RMRKVVNIINAMEPEMEKLSDEELKGKTAEFRARL---E---KGEVLENLIPEAFAVVREASKRVFGMRHFDVQLLGGMVLNERCIAEMRTGEGKTLTATLPAYLNALTGKGVHVVTVNDYLAQRDAENNRPLFEFLGLTVGINLP--------------------------------------------------GMPAPAKREAYAADITYGTNNEYGFDYLRDNMAFSPEERVQR---K---LHYALVDEVDSILIDEARTPLIISGP-------------------------------------------------------------------------------------------------------------------------------------------------IQNENQTLASITFQNYFRLYEKLAGMTGTADTEAFEFSSIYKLDTVVVPTNRPMIRKDLPDLVYMTEAEKIQAIIEDIKERTAKGQPVLVGTISIEKSELVSNELT------------------------------------------------------------------------K----------------------------------------------------------------------------AGIK----HNVLNAKFHANEAAIVAQAGYPAAVTIATNMAGRGTDIVLG-GSWQAE-------------------------------V-----AA-----LE-------------------------------N------PTAEQIEKIKADWQVR-----HDA----VLEAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDALMRIFASDRVSGMMRKLGMKPGEAIEHPWVTKAIANAQRKVESRNFDIRKQLLEYDDVANDQRRAIYSQRNELL---DVS----D--VSE----TIN----S----IREDVF----KATIDAYIPPQS---------LEE-MW--DIPG-------L----QERLKNDF--DLDLP---I--AEW-LDKEPEL--HEE--TLR------ERILAQSIEVYQRKEEVV----GAEMMRHFEKGVMLQTLDSLWKEHLAAMDYLRQGIHLRGYAQKDPKQEYKRESFSMFAAM--------------------LESLKYEVISTLSKVQVRMP-------------------------------------------
1 PsiBlast_PDB 88.0250% -78 - C2 -2FSF - SECA_ECOLI A:[13-834] -----------RNDRTLR-RMRKVVNIINAMEPEMEKLSDEELKGKTAEFRARL---E---KGEVLENLIPEAFAVVREASKRVFGMRHFDVQLLGGMVLNERCIAEMRTGEGKTLTATLPAYLNALTGKGVHVVTVNDYLAQRDAENNRPLFEFLGLTVGINLP--------------------------------------------------GMPAPAKREAYAADITYGTNNEYGFDYLRDNMAFSPEERVQR---K---LHYALVDEVDSILIDEARTPLIISGP-------------------------------------------------------------------------------------------------------------------------------------------------IQNENQTLASITFQNYFRLYEKLAGMTGTADTEAFEFSSIYKLDTVVVPTNRPMIRKDLPDLVYMTEAEKIQAIIEDIKERTAKGQPVLVGTISIEKSELVSNELT------------------------------------------------------------------------K----------------------------------------------------------------------------AGIK----HNVLNAKFHANEAAIVAQAGYPAAVTIATNMAGRGTDIVLG-GSWQ-------------------------------AEV-----AA-----LE-------------------------------NP----T------AEQIEKIKAD-----WQVRHDAVLEAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDALMRIFASDRVSGMMRKLGMKPGEAIEHPWVTKAIANAQRKVESRNFDIRKQLLEYDDVANDQRRAIYSQRNELL-----D--VSD--VSE----TIN----S----I----R----EDVFKATID--A---------YIP-PQ--SLEE-------MWDIPGLQERLKN--DFDLD---L--P-I-A---EWL--DKE--PELHEETLRERILAQSIEVYQRKEEVVGAE----MMRHFEKGVMLQTLDSLWKEHLAAMDYLRQGIHLRGYAQKDPKQEYKRESFSMFAAM--------------------LESLKYEVISTLSKVQVRMP-------------------------------------------
5 PsiBlast_PDB 86.8948% -79 - C2 -2FSG SECA_ECOLI A:[8-826] --------------RTLR-RMRKVVNIINAMEPEMEKLSDEELKGKTAEFRARL---E---KGEVLENLIPEAFAVVREASKRVFGMRHFDVQLLGGMVLNERCIAEMRTGEGKTLTATLPAYLNALTGKGVHVVTVNDYLAQRDAENNRPLFEFLGLTVGINLP--------------------------------------------------GMPAPAKREAYAADITYGTNNEYGFDYLRDNMAFSPEERVQR---K---LHYALVDEVDSILIDEARTPLIISGP-----------------------------------------------------------------------------------------------------------------------------------------------------NQTLASITFQNYFRLYEKLAGMTGTADTEAFEFSSIYKLDTVVVPTNRPMIRKDLPDLVYMTEAEKIQAIIEDIKERTAKGQPVLVGTISIEKSELVSNELT------------------------------------------------------------------------K----------------------------------------------------------------------------AGIK----HNVLNAKFHANEAAIVAQAGYPAAVTIATNMAGRGTDIVLG-GSWQ-------------------------------AEV-----AA-----LE-------------------------------NP----T------AEQIEKIKAD-----WQVRHDAVLEAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDALMRIFASDRVSGMMRKLGMKPGEAIEHPWVTKAIANAQRKVESRNFDIRKQLLEYDDVANDQRRAIYSQRNELL-----D--VSD--VSETINSIRE----D----V----F----KATIDAYIP--P---------QSL-EE--MWDI-------P----GLQERLKN--DFDLD---L--P-I-A---EWL--DKE--PELHEETLRERILAQSIEVYQRKEEVVGAEMMRHF----EKGVMLQTLDSLWKEHLAAMDYLRQGIHLRGYAQKDPKQEYKRESFSMFAAM--------------------LESLKYEVISTLSKVQVRMP-------------------------------------------
47 Fugue 86.3447% -65 - C2 -1M6N SECA_BACSU A:[1-802] MLGILNKMFDP-TKRTLN-RYEKIANDIDAIRGDYENLSDDALKHKTIEFKERL---E---KGATTDDLLVEAFAVVREASRRVTGMFPFKVQLMGGVALHDGNIAEMKTGEGKTLTSTLPVYLNALTGKGVHVVTVNEYLASRDAEQMGKIFEFLGLTVGLNLN--------------------------------------------------SMSKDEKREAYAADITYSTNNELGFDYLRDNMVLYKEQMVQR---P---LHFAVIDEVDSILIDEARTPLIISGQAAKSTKLYVQANAFVRTL-KA------------EKD-------YTYDIKTKAVQLTEEGMTKAEKAF-------GIDNLFDVKHVALNHHINQALKAHVAMQKDVDYVVEDGQVVIVDSFTGRLMKGRRYSEGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAKTEEEEFRNIYNMQVVTIPTNRPVVRDDRPDLIYRTMEGKFKAVAEDVAQRYMTGQPVLVGTVAVETSELISKLLK------------------------------------------------------------------------N----------------------------------------------------------------------------KGIP----HQVLNAKNHEREAQIIEEAGQKGAVTIATNMAGRGTDIKLG-EG--------------------------------------------------------------------------------------------------------------------VKELGGLAVVGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMEDELMRRFGAERTMAMLDRFGMDDSTPIQSKMVSRAVESSQKRVEGNNFDSRKQLLQYDDVLRQQREVIYKQRFEVI---DSENLREI--VEN----MIK----S----S----L----ERAIAAYTP--R---------EEL-PEEWKLDG-------L----VDLINTTYLDEGALE---K--SDI-F---G-K--EPD--EML------ELIMDRIITKYNEKEEQFG----KEQMREFEKVIVLRAVDSKWMDHIDAMDQLRQGIHLRAYAQTNPLREYQMEGFAMFEHM--------------------IESIEDEVAKFVMKAEIENNLEREEVVQGQTTAHQPQEG------------------------
6 PsiBlast_PDB 86.2245% -66 - C2 -3IQY SECA_BACSU A:[12-802] ------------TKRTLN-RYEKIANDIDAIRGDYENLSDDALKHKTIEFKERL---E---KGATTDDLLVEAFAVVREASRRVTGMFPFKVQLMGGVALHDGNIAEMKTGEGKTLTSTLPVYLNALTGKGVHVVTVNEYLASRDAEQMGKIFEFLGLTVGLNLN--------------------------------------------------SMSKDEKREAYAADITYSTNNELGFDYLRDNMVLYKEQMVQR---P---LHFAVIDQVDSILIDEARTPLIISGQAAKSTKLYVQANAFVRTLKA-------------EKD-------YTYDIKTKAVQLTEEGMTKAE---KAFGI----DNLFDVKHVALNHHINQALKAHVAMQKDVDYVVEDGQVVIVDSFTGRLMKGRRYSEGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAKTEEEEFRNIYNMQVVTIPTNRPVVRDDRPDLIYRTMEGKFKAVAEDVAQRYMTGQPVLVGTVAVETSELISKLLK------------------------------------------------------------------------N----------------------------------------------------------------------------KGIP----HQVLNAKNHEREAQIIEEAGQKGAVTIATNMAGKGTDIKLG-----------------------------------------------------------------------------------------------------EGVK----------------ELGGLAVVGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMEDELMRRFGAERTMAMLDRFGMDDSTPIQSKMVSRAVESSQKRVEGNNFDSRKQLLQYDDVLRQQREVIYKQRFEVI---DSE----N--LRE----IVE----N----M----I----KSSLERAIA--AYTPREELPEEWK-LD--GLVD-------L----INTTYLDE--G-ALE---K--SDI-------F--GKEPDEML------ELIMDRIITKYNEKEEQFGKEQMREFEKVIV----LRAVDSKWMDHIDAMDQLRQGIHLRAYAQTNPLREYQMEGFAMFEHMIESIEDEVAKFVMKAEIENNLEREEVVQGQTTAHQPQEG--------------------------------------------
27 HHSearch 86.0847% -75 - C2 -1TF5 - SECA_BACSU A:[2-780] -LGILN-------KRTLN-RYEKIANDIDAIRGDYENLSDDALKHKTIEFKERL---E---KGATTDDLLVEAFAVVREASRRVTGMFPFKVQLMGGVALHDGNIAEMKTGEGKTLTSTLPVYLNALTGKGVHVVTVNEYLASRDAEQMGKIFEFLGLTVGLNLN--------------------------------------------------SMSKDEKREAYAADITYSTNNELGFDYLRDNMVLYKEQMVQR---P---LHFAVIDEVDSILIDEARTPLIISGQAAKSTKLYVQANAFVRTLKA-------------EKD-------YTYDIKTKAVQLTEEGMTKAEKAFGI-------DNLFDVKHVALNHHINQALKAHVAMQKDVDYVVEDGQVVIVDSFTGRLMKGRRYSEGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAKTEEEEFRNIYNMQVVTIPTNRPVVRDDRPDLIYRTMEGKFKAVAEDVAQRYMTGQPVLVGTVAVETSELISKLLK------------------------------------------------------------------------N----------------------------------------------------------------------------KGIP----HQVLNAKNHEREAQIIEEAGQKGAVTIATNMAGRGTDIKLG-EG--------------------------------------------------------------------------------------------------------------------VKELGGLAVVGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMEDELMRRFGAERTMAMLDRFGMDDSTPIQSKMVSRAVESSQKRVEGNNFDSRKQLLQYDDVLRQQREVIYKQRFEVI---DSE----N--LRE----IVENMIKS----S----L----ERAIAAYTPREE---------LPE-EW--KLDG-------L----VDLINTTY--LDEGA---L--EKSDI---FGK--EPD--EML------ELIMDRIITKYNEKEEQF----GKEQMREFEKVIVLRAVDSKWMDHIDAMDQLRQGIHLRAYAQTNPLREYQMEGFAMFEHM--------------------IESIEDEVAKFVMKAEI----------------------------------------------
23 PsiBlast_CBE 85.0447% -70 - C2 -3JV2 SECA_BACSU B:[17-768] --------------RTLN-RYEKIANDIDAIRGDYENLSDDALKHKTIEFKERL---E---KGATTDDLLVEAFAVVREASRRVTGMFPFKVQLMGGVALHDGNIAEMKTGEGKTLTSTLPVYLNALTGKGVHVVTVNEYLASRDAEQMGKIFEFLGLTVGLNLN--------------------------------------------------SMSKDEKREAYAADITYSTNNELGFDYLRDNMVLYKEQMVQR---P---LHFAVIDEVDSILIDEARTPLIISGQAAKSTKLYVQANAFVRTLKA-------------EKD-------YTYDIKTKAVQLTEEGMTKAE---KAFGI----DNLFDVKHVALNHHINQALKAHVAMQKDVDYVVEDGQVVIVDSFTGRLMKGRRYSEGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAKTEEEEFRNIYNMQVVTIPTNRPVVRDDRPDLIYRTMEGKFKAVAEDVAQRYMTGQPVLVGTVAVETSELISKLLK------------------------------------------------------------------------N----------------------------------------------------------------------------KGIP----HQVLNAKNHEREAQIIEEAGQKGAVTIATNMAGRGTDIKLG-----------------------------------------------------------------------------------------------------EGVK----------------ELGGLAVVGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMEDELMRRFGAERTMAMLDRFGMDDSTPIQSKMVSRAVESSQKRVEGNNFDSRKQLLQYDDVLRQQREVIYKQRFEVI---DSE----N--LRE----IVE----N----M----I----KSSLERAIA--AYTPRE----EWK-LD--GLVD-------L----INTTYLDE--G-ALE---K--SDI-------F--GKEPDEML------ELIMDRIITKYNEKEEQFGKEQMREFEKVIV----LRAVDSKWMDHIDAMDQLRQGIHLRAYAQTNPLREYQMEGFAMFEHM--------------------IESIEDEVAKFVMKAE-----------------------------------------------
10 PsiBlast_PDB 84.8847% -70 - C2 -3JV2 SECA_BACSU A:[18-768] ---------------TLN-RYEKIANDIDAIRGDYENLSDDALKHKTIEFKERL---E---KGATTDDLLVEAFAVVREASRRVTGMFPFKVQLMGGVALHDGNIAEMKTGEGKTLTSTLPVYLNALTGKGVHVVTVNEYLASRDAEQMGKIFEFLGLTVGLNLN--------------------------------------------------SMSKDEKREAYAADITYSTNNELGFDYLRDNMVLYKEQMVQR---P---LHFAVIDEVDSILIDEARTPLIISGQAAKSTKLYVQANAFVRTLKA-------------EKD-------YTYDIKTKAVQLTEEGMTKAE---KAFGI----DNLFDVKHVALNHHINQALKAHVAMQKDVDYVVEDGQVVIVDSFTGRLMKGRRYSEGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAKTEEEEFRNIYNMQVVTIPTNRPVVRDDRPDLIYRTMEGKFKAVAEDVAQRYMTGQPVLVGTVAVETSELISKLLK------------------------------------------------------------------------N----------------------------------------------------------------------------KGIP----HQVLNAKNHEREAQIIEEAGQKGAVTIATNMAGRGTDIKLG-----------------------------------------------------------------------------------------------------EGVK----------------ELGGLAVVGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMEDELMRRFGAERTMAMLDRFGMDDSTPIQSKMVSRAVESSQKRVEGNNFDSRKQLLQYDDVLRQQREVIYKQRFEVI---DSE----N--LRE----IVE----N----M----I----KSSLERAIA--AYTP-------WK-LD--GLVD-------L----INTTYLDE--G-ALE---K--SDI-------F--GKEPDEML------ELIMDRIITKYNEKEEQFGKEQMREFEKVIV----LRAVDSKWMDHIDAMDQLRQGIHLRAYAQTNPLREYQMEGFAMFEHM--------------------IESIEDEVAKFVMKAE-----------------------------------------------
17 PsiBlast_PDB 84.8442% -71 - C2 -3JUX SECA_THEMA A:[7-804] ------------NKRILK-KYAKMVSKINQIESDLRSKKNSELIRLSMVLKEKV---N---SFEDADEHLFEAFALVREAARRTLGMRPFDVQVMGGIALHEGKVAEMKTGEGKTLAATMPIYLNALIGKGVHLVTVNDYLARRDALWMGPVYLFLGLRVGVINSLGKSYEVVWKNPDLARKAIEENWSVWPDGFNGEVLKEESMNKEAVEAFQVELKEITRKEAYLCDVTYGTNNEFGFDYLRDNLVLDYNDKVQR---G---HFYAIVDEADSVLIDEARTPLIISGPSKESPSVYRRFAQIAKKF-VK------------DKD-------FTVDEKARTIILTEEGVAKAEKIIGVENL-------YDPGNVSLLYHLINALKALHLFKKDVDYVVMNGEVIIVDEFTGRLLPGRRYSGGLHQAIEAKEGVPIKEESITYATITFQNYFRMYEKLAGMTGTAKTEESEFVQVYGMEVVVIPTHKPMIRKDHDDLVFRTQKEKYEKIVEEIEKRYKKGQPVLVGTTSIEKSELLSSMLK------------------------------------------------------------------------K----------------------------------------------------------------------------KGIP----HQVLNAKYHEKEAEIVAKAGQKGMVTIATNMAGRGTDIKLGPGVAEL---------------------------------------------------------------------------------------------------------------------GGLCIIGTERHESRRIDNQLRGRAGRQGDPGESIFFLSLEDDLLRIFGSEQIGKVMNILKIEEGQPIQHPMLSKLIENIQKKVEGINFSIRKTLMEMDDVLDKQRRAVYSLRDQIL---LEK--DYDEYLKD----IFE----D----V----V----STRVEEFCS--G---------KNW-D----IES-------L----KNSLSF-F--PAGLF---D--LDE-K---QFS--SSE--ELH------DYLFNRLWEEYQRKK-----QEIGEDYRKVIRFLMLRIIDDHWRRYLEEVEHVKEAVQLRSYGQKDPIVEFKKETYYMFDEM--------------------MRRINDTIANYVLRV------------------------------------------------
15 PsiBlast_PDB 84.7742% -72 - C2 -4YS0 SECA_THEMA A:[7-804] ------------NKRILK-KYAKMVSKINQIESDLRSKKNSELIRLSMVLKEKV---N---SFEDADEHLFEAFALVREAARRTLGMRPFDVQVMGGIALHEGKVAEMKTGEGKTLAATMPIYLNALIGKGVHLVTVNDYLARRDALWMGPVYLFLGLRVGVINSLGKSYEVVWKNPDLARKAIEENWSVWPDGFNGEVLKEESMNKEAVEAFQVELKEITRKEAYLCDVTYGTNNEFGFDYLRDNLVLDYNDKVQR---G---HFYAIVDEADSVLIDEARTPLIISGPSKESPSVYRRFAQIAKKF-VK------------DKD-------FTVDEKARTIILTEEGVAKAEKIIGVENL-------YDPGNVSLLYHLINALKALHLFKKDVDYVVMNGEVIIVDEFTGRLLPGRRYSGGLHQAIEAKEGVPIKEESITYATITFQNYFRMYEKLAGMTGTAKTEESEFVQVYGMEVVVIPTHKPMIRKDHDDLVFRTQKEKYEKIVEEIEKRYKKGQPVLVGTTSIEKSELLSSMLK------------------------------------------------------------------------K----------------------------------------------------------------------------KGIP----HQVLNAKYHEKEAEIVAKAGQKGMVTIATNMAGRGTDIKLGPGVAEL---------------------------------------------------------------------------------------------------------------------GGLCIIGTERHESRRIDNQLRGRAGRQGDPGESIFFLSLEDDLLRIFGSEQIGKVMNILKIEEGQPIQHPMLSKLIENIQKKVEGINFSIRKTLMEMDDVLDKQRRAVYSLRDQIL---LEK--DYDEYLKD----IFE----D----V----V----STRVEEFCS--G---------KNW-D----IES-------L----KNSLSF-F--PAGLF---D--LDE-K---QFS--SSE--ELH------DYLFNRLWEEYQRKK-----QEIGEDYRKVIRFLMLRIIDDHWRRYLEEVEHVKEAVQLRS----DPIVEFKKETYYMFDEM--------------------MRRINDTIANYVLRVLEH---------------------------------------------