@TOME V2.3
(Nov 2016)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo0204: (2016-03-13 )
VGLNRFMRAMMVVFITANCITINPDIIFAATDSEDSSLNTDEWEEEKTEEQPSEVNTGPRYETAREVSSRDIKELEKSNKVRNTNKADLIAMLKEKAEKGPNINNNNSEQTENAAINEEASGADRPAIQVERRHPGLPSDSAAEIKKRRKAIASSDSELESLTYPDKPTKVNKKKVAKESVADASESDLDSSMQSADESSPQPLKANQQPFFPKVFKKIKDAGKWVRDKIDENPEVKKAIVDKSAGLIDQLLTKKKSEEVNASDFPPPPTDEELRLALPETPMLLGFNAPATSEPSSFEFPPPPTDEELRLALPETPMLLGFNAPATSEPSSFEFPPPPTEDELEIIRETASSLDSSFTRGDLASLRNAINRHSQNFSDFPPIPTEEELNGRGGRPTSEEFSSLNSGDFTDDENSETTEEEIDRLADLRDRGTGKHSRNAGFLPLNPFASSPVPSLSPKVSKISAPALISDITKKTPFKNPSQPLNVFNKKTTTKTVTKKPTPVKTAPKLAELPATKPQETVLRENKTPFIEKQAETNKQSINMPSLPVIQKEATESDKEEMKPQTEEKMVEESESANNANGKNRSAGIEEGKLIAKSAEDEKAKEEPGNHTTLILAMLAIGVFSLGAFIKIIQLRKNN

Atome Classification :

(20 SA) .........10.....-...20........30........40........50........60-........70........80.........90........100.......110.....---..120........130.......140.......150.......160--.......170.......180.......190.......200.......210.--------......220.......230.......240.......250.......260.......270.......280.......290.......-----300--...-----....310.......320----........330......-.340......--.350.......360.......370.--..-....380........390.......400.......410..-.....420.......430--.......-440.......450..-.....460.......470.......480.--......---490...-....500.-......510.......520.......530-.......540.....---..550....--...560.......570.......580.......590.......600.......610.....-..620....-....630.......-
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) VGLNRFMRAMMVVFIT-ANCITINPDIIFAATDSEDSSLNTDEWEEEKTEEQPSEVNTGPRY-ETAREVSSRDIKELEKSNK-VRNTNKADLIAMLKEKAEKGPNINNNNSEQTENAAIN---EEA-SGADRPAIQVERRHPGLPSDSAAEIKKRRKAIASSDSELESL--TYPDKPTKVNKKKVAKESVADASESDLDSSMQSADESSPQPLKANQQPFFP--------KVFKKIKDAGKWVRDKIDENPEVKKAIVDKSAGLIDQLLTKKKSEEVNASDFPPPPTDEELRLALPETPMLLGFNAPATSEPSSFE-----FPP--PPT-----DEELRLALPETPMLLG-----FNAPATSEPSSFEFPPP-PTEDELEIIR--ETASSLDSSFTRGDLASLRNAINRH--SQ-NFSDFP-PIPTEEELNGRGGRPTSEEFSSLNSGDFTDDEN-SETTEEEIDRLADLRDRG--TGKHSRN-AGFLPLNPFASSPVP-SLSPKVSKISAPALISDITKKTPFKNPSQ--PLNVFN---KKTTTK-TVTKKPTP-VKTAPKLAELPATKPQETVLRENKTPFIE-KQAETNKQSINMPSL---PVIQKEATE--SDKEEMKPQTEEKMVEESESANNANGKNRSAGIEEGKLIAKSAEDEKAKEEPGNHTTLILA-MLAI-GVFS-LGAFIKIIQLRKNN-
19 Fugue 87.5215% 44 - C4 -4RIC FAN1_HUMAN A:[1-631] TGHPYYLRSFLVVLKT-VL--ENEDDMLLFDEQEKGIVTKFYQLSATGQKLYVRLFQRKLSW-IKMTKLEYEEIA-LDLTPV-IEELTNAGFLQTESELQELSEVLELLSAPELKSLAKTFHLVNP-NGQKQQLVDAFLKLAKQRSVIGAVILKRAKALAG-----QSV--RICKGPRAVFSRILLLFSLTDSMEDE-DAACGGQGQLSTVLLVNLGRMEFPSYTINRKTHIFQDRDDLIRYAAATHMLS-DISSAMANGNWEEAKELAQCAKRDWNRLKNHPSLRCHEDLPLFLRCFTVGWIYTRILSRFVEILQ-----RLHMYEEA-----VRELESLLSQRIYCPD-----SRGRWWDRLALNLHQHLKRLEPTIKCIT--EGLA--DPEVRTGHRLSLYQRAVRLRESP-SCKKFK-HLFQQLPEMAVQDVKHVTITGRLCKSVFV---M-VLCSVEEL-ALAHYRRSGFDQGIHGEG-STFSTLYGLLLWDII-FMDG----------IPDV-----FRNACQAFPLDLCTDSFFTSRRP-ALEARLQL-IHDAPEESLRAWVAATWHEQEGRVASLVSWDRFTSLQQAQDLVSCLGGPVLSGVCRHLAADFRHCRGGLPDLVVW--------NSQSRHFKLVEVK-------------GPNDRLSHKQM-IWLA-ELQK-LGAEVEVCHVVAV--
21 Fugue 60.9215% 72 * C3 *3TNF ? B:[3-381] ----------------------------------------LDEYEQAIKRAQEN-IKKGEEL-EKKLDKLERQGKDLEDKYK-TYEENLEGFEKLLTDSEE---------LSLSEINEKM---EAF-SKDSEKLTQLMEKHKG-DEKTVQSLQREHHDIKAKLANLQVLHDAHTGKKSYVNEKGNPVSSLKDAHLAINKDQEVVEHEGQFYLLQKGQWD--------------AIKNNPAALEKAQKDYSQSKHDLATIKMEALIHKLSLEMEKQLETINNLIMSTDPKENEEATKLLHKHNGLNLKLANLQDMLA-----VHR--KEKSFFNEKGEEVTSLNDAHYVIGKDQQLFNLGGKFYPIHKEQKIL-EKDGKFYLLKQGEDWESIKDS------PEKQKKAEHD--FH-KLQYET-PMTVKKLVHHNKGLETTIHKERVEETKQQLEDN-GKEKIEIANNISK-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24 Fugue 58.7713% 70 - C4 -4YCZ - ? B:[66-928] -SEYRYAALAKDAYQQMGTAPVTEPPQVILGTEDLLSRLYDEK-------------------MDDTLATAAAQLAALWREHVDETPFEKANYLANLALQIH-------HPLPQTLFRWLN---EYHMYGSQVDDILRHRPSPACHSLFWQAVFIALK-VGDAARLLDQA--GWGHVYAYVNVQRAVDETIAVL-------------ESCPTLFRVRARGLLE--------HLRRFAEG------WEIYENLNIVFDIVLGQQGAI----LEAAQDWLEATVGLANSESYLDRLA----------RAFHTAVESDFVEIGMACVF--EDN-----IKGVIGLLRGWSLPIA-----AAVAEIASLGKWLEVDG-IKDSTLVQYA--QALADYEGLSSVQDRDGWELSISVL--GRMPERSEEMVRDLVEHLVQQLHVDSNATVDRLW--FLLNELGMIEFAEDTTETYGDILARD--SHRYGEAMWYYALAHRPNKVREVMNLLTSYSLIQPPANDLD---DYLYKLLND--RKNTLE---QCASQDMEAAELLGKMLSGYASLRQFYDIRPHATPLSRRKQAATA-LISVIASSDDEDFLL---ALLGEALVF--VSDPTL--DQIDVLLKAIEDLQAVGSRVYNACDEFLQLVLASAPGGSSLVASQLQRSLSGTGGEDIMRRLR-LGLAKDLAGLWLAEA
2 PsiBlast_PDB 47.2926% 111 - C5 -1J37 - ACE_DROME A:[10-100] ---------------------------------------------------------------------------------------------------IQAKEYLENLNKELAKRTNVE---TEA-AWAYRSAITDENEKK--KNEISAELAKFMKEVASDTTKFQWR--SYQSEDLKRQFKALTKLGYAALPEDDY------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1 PsiBlast_PDB 46.3426% 116 - C5 -1J36 ACE_DROME A:[10-100] ---------------------------------------------------------------------------------------------------IQAKEYLENLNKELAKRTNVE---TEA-AWAYRSAITDENEKK--KNEISAELAKFMKEVASDTTKFQWR--SYQSEDLKRQFKALTKLGYAALPEDDY------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3 PsiBlast_PDB 45.6926% 125 - C5 -1J38 - ACE_DROME A:[10-100] ---------------------------------------------------------------------------------------------------IQAKEYLENLNKELAKRTNVE---TEA-AWAYRSAITDENEKK--KNEISAELAKFMKEVASDTTKFQWR--SYQSEDLKRQFKALTKLGYAALPEDDY------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25 Fugue 42.3112% 113 * C4 *2KCL - ? A:[1-99] ------------------------------------------------------------------EDPEDPFTRYALAQEH-LKHDNASRALALFEELVETDPD---YVGTYYHLGKLY---ERL----DRTDDAIDTYAQGIEVAREEGTQKDLSELQDAKLKAEGL--EHHHHHH--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22 Fugue 41.3816% 60 - C3 -2K8S - ? A:[1-80] -------VASKAIFYH-AGC-----PVCVSAEQAVANAIDPSKYTVEIVHLGTDK----ARI-AEAEKAGVKSVPALVIDGA-AFHINFGAGIDDLKGS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6 PsiBlast_PDB 37.9734% 186 - C5 -3QYX - ESPR_MYCTU A:[68-111] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FFRIKAAYFTDDEY-YEKLDKELQWLCTMRDDG--VRRIAQR-AHGLP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
20 Fugue 37.9640% 359 * C5 *2IBF - IPAA_SHIFL B:[1-25] ---------------------------------------------------------NHAIY-EKAKEVSSALSKVLSKIDD-T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18 Fugue 36.6727% 294 - C5 -2OJM - A:[1-22] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FFH--------HIFRGIVHVGKTIHRLVTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5 PsiBlast_PDB 36.3734% 188 - C5 -3QF3 ESPR_MYCTU A:[68-111] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FFRIKAAYFTDDEY-YEKLDKELQWLCTMRDDG--VRRIAQR-AHGLP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15 HHSearch 35.8056% 438 - C5 -2LA2 - ? A:[2-19] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--------KIFKKIEKVGRNVRDGI-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8 HHSearch 34.0738% 401 - C5 -1EJ5 - A:[79-102] ---------------------------------------------------------------------------------------------------------------------------------------------EGLVGALMHVMQKRSRAIHSSDEG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4 PsiBlast_PDB 33.9434% 201 - C5 -4NDW - ESPR_MYCTU A:[88-131] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FFRIKAAYFTDDEY-YEKLDKELQWLCTMRDDG--VRRIAQR-AHGLP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
26 Fugue 32.0222% 317 - C5 -2OJO - ? A:[1-22] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FFH--------HIFRAIVHVAKTIHRLVTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
16 HHSearch 30.4717% 136 - C5 -2WWB - SC61B_CANFA C:[61-94] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EDSPGLKVGPVPVLVMS-LLFI-ASVFMLHIWGKYT-------
7 PsiBlast_PDB 30.3834% 243 - C5 -3QWG - ESPR_MYCTU A:[68-96] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FFRIKAAYFTDDEY-YEKLDKELQWLCTMR---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17 Fugue 29.1410% 169 - C5 -1R1B - SYEP_CRIGR A:[1-56] ------------------------------------------------------------MV-YDKIAAQGEVVRKLKAEKA-PKAKVTEAVECLLSLKAEYKEKTGKEYVPGLEHHH--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13 HHSearch 18.1610% 296 - C5 -1IIJ - A:[2-22] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QRASPVTFII-ATVV-GVLL-FLI------------