@TOME V2.3
(Nov 2016)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : gbs0927: (2015-12-04 )
MTQLLQLHHVTKKYHKHTAVNDVTVSIPTGKIIGLLGPNGSGKTTIIKMINGLLQPDKGDIVIDGYRPSVETKKIISYLPDTSYLQENMKIKDVVTLFEDFYNDFDSKVAYQLFEDLNLNPRERLKNLSKGNKEKVQLILVMSRKARLYILDEPIGGVDPAARDYILKTIISNYSNDASVLISTHLISDIEPILDEVIFLKEGEIDLQGNADDLREEHNCSIDALFRERFKK

Atome Classification :

(20 SA) .........10....--.-----..-.20........30........40........50........60....---....-----------------70------..-..-----------.....80..------.-.....90..----...--.-..100-.--.----.----.---.....110--.-----......-----120----.-----------...-----.-.-----------------..130.......140.......150.......160.......170...-.-..-.180.........190.......200.......210.-....---..220........230--------------------------------------------------------------------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MTQLLQLHHVTKKYH--K-----HT-AVNDVTVSIPTGKIIGLLGPNGSGKTTIIKMINGLLQPDKGDIVIDG---YRPS-----------------V-------ET-KK-----------IISYLPDTS------Y-LQENMKIKD----VVT--L-FED---F--Y----N----D---FDSKVAYQ--L-----FEDLNL-----N-P----R-----------ERL-----K-N-----------------LSKGNKEKVQLILVMSRKARLYILDEPIGGVDPAARDYILKTIISNYS-N-DA-SV--LISTHLISDIEPILDEVIFLKEGEIDLQGNADD-LREE---HNC-SIDALFRERFKK--------------------------------------------------------------------------------------------------------
1 PsiBlast_PDB 88.3330%-107 - C1 -4RVC - ? A:[3-238] ---LLEVKDLSGGYT--A-----QN-VLEDVTFVVDRGEMVALIGLNGAGKSTTIKHIIGLMEPRRGAISING---YRLADG---------------P-------ETYRR-----------QFAYIPETP------V-LYEELTLEE----HLR--L-AAM---A--Y----G----L---SEAEYERR--L-----PPLLRE-----F-R----L-----------ERRLSSFPA-H-----------------FSKGMKQKVMIVCAFLLEPPLYIIDEPFLGLDPLAIHALLERMNEQKA-K-GA-GI--LLSTHILATAERYCDSFVILHNGRVKAKGTLDD-IRRQFGLRGA-SLDELYVELTK---------------------------------------------------------------------------------------------------------
4 PsiBlast_PDB 84.7826%-100 - C1 -4QC2 ? A:[4-229] ----LTAKNLAKAYK--G-----RR-VVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDD---DDIS-----------------LLPLHA--RA-RR-----------GIGYLPQEA------S-IFRRLSVYDNLMAVLQ--I-RDD---L--S----A----E---QREDRANE--L-----MEEFHIE----H-L----R-----------DSMG----Q-S-----------------LSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRD-S-GL-GV--LITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQDE---HVK-RVYLG---------------------------------------------------------------------------------------------------------------
5 PsiBlast_PDB 83.9826% -97 - C1 -4P32 LPTB_ECOLI A:[3-228] ----LTAKNLAKAYK--G-----RR-VVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDD---DDIS-----------------LLPLHA--RA-RR-----------GIGYLPQEA------S-IFRRLSVYDNLMAVLQ--I-RDD---L--S----A----E---QREDRANE--L-----MEEFHIE----H-L----R-----------DSMG----Q-S-----------------LSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRD-S-GL-GV--LITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQDE---HVK-RVYL----------------------------------------------------------------------------------------------------------------
40 HHSearch 83.3627%-110 - C1 -1VPL ? A:[15-251] ---AVVVKDLRKRIG--K-----KE-ILKGISFEIEEGEIFGLIGPNGAGKTTTLRIISTLIKPSSGIVTVFG---KNVVEEP--------------H-------EV-RK-----------LISYLPEEA------G-AYRNMQGIE----YLR--F-VAG---F--Y----A----SSSSEIEEMVER--A-----TEIAGL-----G-EKI--K-----------DRV-----S-T-----------------YSKGMVRKLLIARALMVNPRLAILDEPTSGLDVLNAREVRKILKQASQ-E-GL-TI--LVSSHNMLEVEFLCDRIALIHNGTIVETGTVEE-LKER---YKAQNIEEVFEEVVK---------------------------------------------------------------------------------------------------------
6 PsiBlast_PDB 82.9726% -97 - C1 -4P33 LPTB_ECOLI A:[3-228] ----LTAKNLAKAYK--G-----RR-VVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDD---DDIS-----------------LLPLHA--RA-RR-----------GIGYLPQEA------S-IFRRLSVYDNLMAVLQ--I-RDD---L--S----A----E---QREDRANE--L-----MEEFHIE----H-L----R-----------DSMG----Q-S-----------------LSGGERRRVEIARALAANPKFILLDQPFAGVDPISVIDIKRIIEHLRD-S-GL-GV--LITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQDE---HVK-RVYLG---------------------------------------------------------------------------------------------------------------
29 HHSearch 81.4724% -99 * C1 *3TUI METN_ECOLI C:[23-257] --HMIKLSNITKVFH--QGTRT-IQ-ALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDG---QELT-----------------TLSESELTKA-RR-----------QIGMIFQHF------N-LLSSRTVFG----NVA--L-PLE---L--D----NTPK-D---EVKRRVTE--L-----LSLVGL-----G-DKH--D-----------SYP-----S-N-----------------LSGGQKQRVAIARALASNPKVLLCDQATSALDPATTRSILELLKDINRRL-GL-TI--LLITHEMDVVKRICDCVAVISNGELIEQDTVSE-VFSH---PKT-PLAQKFIQSTLH--------------------------------------------------------------------------------------------------------
13 PsiBlast_PDB 80.6927%-111 - C1 -3GFO ECFA3_CLOP1 A:[7-234] ---ILKVEELNYNYS--D-----GTHALKGINMNIKRGEVTAILGGNGVGKSTLFQNFNGILKPSSGRILFDN----KPI-----------------D-------YS-RK-----------GI-------------------MKLRE----SIG--IVFQD---P--D----N----Q---LFSASVYQDVS-----FGAVNM-----KLPEDEIR-----------KRV-----D-NALKRTGIEHLKDKPTHCLSFGQKKRVAIAGVLVMEPKVLILDEPTAGLDPMGVSEIMKLLVEMQK-ELGI-TI--IIATHDIDIVPLYCDNVFVMKEGRVILQGNPKE-VFAE---KEV-IRKVNLRLPRIG--------------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 76.8027% -93 - C1 -1VPL ? A:[23-251] -----------KRIG--K-----KE-ILKGISFEIEEGEIFGLIGPNGAGKTTTLRIISTLIKPSSGIVTVFGKNVVEEP-----------------H-------EV-RK-----------LISYLPEEA------G-AYRNMQGIE----YLR--F-VAG---F--Y----A----S---SSSEIEEM--VERATEIAGLGE-----K-I----K-----------DRV-----S-T-----------------YSKGMVRKLLIARALMVNPRLAILDEPTSGLDVLNAREVRKILKQASQ-E-GL-TI--LVSSHNMLEVEFLCDRIALIHNGTIVETGTVEE-LKER---YKAQNIEEVFEEVVK---------------------------------------------------------------------------------------------------------
21 HHSearch 76.7626% -95 - C1 -1Z47 ? A:[13-240] --MTIEFVGVEKIYPG-G-----AR-SVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWIGG---KRVTDL---------------P-------PQ-KR-----------NVGLVFQNY------A-LFQHMTVYD----NVS--F-GLR---E--K----RVPK-D---EMDARVRE--L-----LRFMRL-----E-SYA--N-----------RFP-----H-E-----------------LSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFVRQVHDEM-GV-TS--VFVTHDQEEALEVADRVLVLHEGNVEQFGTPEE-VYEK---PGT-LFVASFIGESNV--------------------------------------------------------------------------------------------------------
37 HHSearch 75.8424%-104 - C1 -3GFO ECFA3_CLOP1 A:[5-236] -DYILKVEELNYNYS--DG----TH-ALKGINMNIKRGEVTAILGGNGVGKSTLFQNFNGILKPSSGRILFDN---KPIDYSRKGI-----------M-------KL-RE-----------SIGIVFQDP------DNQLFSASVYQ----DVS--F-GAV---N--M----KLPE-D---EIRKRVDN--A-----LKRTGI-----E-HLK--D-----------KPT-----H-C-----------------LSFGQKKRVAIAGVLVMEPKVLILDEPTAGLDPMGVSEIMKLLVEMQKEL-GI-TI--IIATHDIDIVPLYCDNVFVMKEGRVILQGNPKE-VFAE---KEV-IRKVNLRLPRIG--------------------------------------------------------------------------------------------------------
3 PsiBlast_PDB 74.0328% -93 - C1 -4WBS ? A:[40-271] ----LVVRNLKKRYG--S-----RT-VVKDVSLDVKSGEVVGLLGPNGAGKTTSFYMIVGLVPLDAGEIDLDG---KSIS-----------------LLPIHK--RA-SL-----------GLSYLPQEASVFRKLS-VEENIRAVL----ELQ--V-GDDGKRL--S----K----D---AIASRTEA--L-----LDELQI-----S-HL---R-----------ENP-----ALS-----------------LSGGERRRVEIARALATNPSFILLDEPFAGVDPIAVLEIQKIVKFLKQ-R-NI-GV--LITDHNVRETLGICDHAYIISDGSVLAAGAPGD-IIEN---ESV-RRVYLGEHFRM---------------------------------------------------------------------------------------------------------
34 HHSearch 72.5022%-100 - C1 -2OLJ ? A:[22-252] -LQMIDVHQLKKSFG--S-----LE-VLKGINVHIREGEVVVVIGPSGSGKSTFLRCLNLLEDFDEGEIIIDG---INLKAKDTNL-----------N-------KV-RE-----------EVGMVFQRF------N-LFPHMTVLN----NIT--L-APM---K--V----RKWPRE---KAEAKAME--L-----LDKVGL-----K-DKA--H-----------AYP-----D-S-----------------LSGGQAQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLSVMKQLAN-E-GM-TM--VVVTHEMGFAREVGDRVLFMDGGYIIEEGKPED-LFDR---PQH-ERTKAFLSKVF---------------------------------------------------------------------------------------------------------
8 PsiBlast_PDB 70.9328% -84 - C1 -1Z47 ? A:[30-245] --------------------------SVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWIGG---KRVTDL---------------P-------PQ-KR-----------NVGLVFQNY------A-LFQHMTVYD----NVSFGL-REK---R--VPK--D----E---MDARVREL--LR----FMRLES-----Y-A----N-----------RFP-----H-E-----------------LSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRE-LRTFVRQVH-D-EM-GVTSVFVTHDQEEALEVADRVLVLHEGNVEQFGTPEE-VYEK---PGT-LFVASFIGESNV--------------------------------------------------------------------------------------------------------
43 Fugue 70.5124% -81 - C1 -1Z47 ? A:[11-355] GSMTIEFVGVEKIYPG-G-----AR-SVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWIGG---KRVTDL---------------P-------PQ-KR-----------NVGLVFQNY------A-LFQHMTVYD----NVS--F-GLR---E--K----R----V---PKDEMDAR--V-----RELLRFMRLESY-A----N-----------RFP-----H-E-----------------LSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFVRQVHD-EMGV-TS--VFVTHDQEEALEVADRVLVLHEGNVEQFGTPEE-VYEK---PGT-LFVASFIGESNVWTRAVQNGRIEVAGAALPVDPAVSEGSEVAVVVRPKDVELQPASEREAHAQVVRSAFKGSYSACWIRTKDGEVWEVHVPSADRHRWSPGAWVHMNVTRWFIFPR
9 PsiBlast_PDB 69.0224% -91 - C1 -4HUQ - ECFA2_LACBA A:[5-233] ------FEHVTYTYQ--AGTPMAHT-ALTDVSLTVPDRGYLAIIGHTGSGKSTLIQQLNALLKPTSGTIKIDE---FTIT-----------------P-------ET-TNAALKPLRQHVGMVFQFPENQ------L-FEETVR-QD----IAF--G-PKN---FGMA----D----A---DALALADE--M-----LTTVGL-----D-Q----SYA---------ERS-----PFE-----------------LSGGQMRRVAIAGVLAMQPKVLVLDEPTAGLDPQGRQEMMRLFARLHQ-E-QGLTI--VLVTHQMEDVAQYAEQVAVMHEGRLMKFGTPAD-VFSN---REW-LQDHQLDVPQAA--------------------------------------------------------------------------------------------------------
10 PsiBlast_PDB 68.7424% -82 - C1 -4HZU - ECFA2_LACBA B:[5-233] ------FEHVTYTYQ--AGTPMAHT-ALTDVSLTVPDRGYLAIIGHTGSGKSTLIQQLNALLKPTSGTIKIDE---FTIT-----------------P-------ET-TNAALKPLRQHVGMVFQFPENQ------L-FEETVR-QD----IAF--G-PKN---FGMA----D----A---DALALADE--M-----LTTVGL-----D-Q----SYA---------ERS-----PFE-----------------LSGGQMRRVAIAGVLAMQPKVLVLDEPTAGLDPQGRQEMMRLFARLHQ-E-QGLTI--VLVTHQMEDVAQYAEQVAVMHEGRLMKFGTPAD-VFSN---REW-LQDHQLDVPQAA--------------------------------------------------------------------------------------------------------
35 HHSearch 68.4120%-102 - C1 -1B0U HISP_SALTY A:[5-246] --NKLHVIDLHKRYG--G-----HE-VLKGVSLQARAGDVISIIGSSGSGKSTFLRCINFLEKPSEGAIIVNG---QNINLVRDKDGQLKVADKNQLR-------LL-RT-----------RLTMVFQHF------N-LWSHMTVLE----NVM--E-API---Q--VLGLSK----H---DARERALK--Y-----LAKVGI-----D-ERAQ-G-----------KYP-----V-H-----------------LSGGQQQRVSIARALAMEPDVLLFDEPTSALDPELVGEVLRIMQQLAE-E-GK-TM--VVVTHEMGFARHVSSHVIFLHQGKIEEEGDPEQ-VFGN---PQS-PRLQQFLKGSLK--------------------------------------------------------------------------------------------------------
39 HHSearch 66.4722%-109 - C1 -3GD7 CFTR_HUMAN (first) A:[18-247] --GQMTVKDLTAKYTEGG-----NA-ILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGEIQIDG---VSWDSITL-------------E-------QW-RK-----------AFGVIPQKV------F-IFS-GTFRK----NLD--P-NAA---H-----------------SDQEIWK--V-----ADEVGL-----R-SVI--EQFPGKLDFVLVDGG-----C-V-----------------LSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVTYQIIRRTLKQAF--A-DC-TV--ILCEARIEAM-LECDQFLVIEENKVRQYDSILE-LYHY---PAD-RFVAGFIGSPKM--------------------------------------------------------------------------------------------------------
27 HHSearch 66.4021%-100 - C1 -3RLF MALK_ECOLI A:[2-228] --ASVQLQNVTKAWG--E-----VV-VSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGE---KRMNDT---------------P-------PA-ER-----------GVGMVFQSY------A-LYPHLSVAE----NMS--F-GLK---L--A----GAKK-E---VINQRVNQ--V-----AEVLQL-----A-HLL--D-----------RKP-----K-A-----------------LSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRL-GR-TM--IYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLE-LYHY---PAD-RFVAGFIGSPKM--------------------------------------------------------------------------------------------------------
22 HHSearch 66.3922%-100 - C1 -1V43 - ? A:[10-238] -MVEVKLENLTKRFG--N-----FT-AVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIYFGD---RDVTYL---------------P-------PK-DR-----------NISMVFQ-------------HMTVYE----NIA--F-PL-------K----KFPK-D---EIDKRVRW--A-----AELLQI-----E-ELL--N-----------RYP-----A-Q-----------------LSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAEIKKLQQKL-KV-TT--IYVTHDQVEAMTMGDRIAVMNRGQLLQIGSPTE-VYLR---PNS-VFVATFIGAPEM--------------------------------------------------------------------------------------------------------