@TOME V2.3
(Nov 2016)

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3D Common Core:

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Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : gbs1847: (2015-12-11 )
MDKKKILVTGIVPKEGLRKLMDRFDVTYSEDRPFSRDYVLEHLSEYDGWLLMGQKGDKEMIDAGENLQIISLNAVGFDHVDTAYAKEKGIIVSNSPQAVRVPTAEMTFALILAASKRLAFYDSIVRSGEWIDPSEQRYQGLTLQGSTLGIYGMGRIGLTVANFAKAFGMTVVYNDVYRLPEDKEKELGVTYLEFDQLIKTADVITIHAPALPSTIHKFNKDVFAKMKNRSYLINAARGPIVSEEALIEALKEGEIAGAGLDVFENEPQVSEGLRSLDNVIMSPHAGTGTIEGRRTLAEEAADNIIAFFDGKPQNIVNK

Atome Classification :

(23 SA) .........10........20-..-...---...30...-......40........50.-.-..-..-...60..-......70........80........90........100.......110.......120.......130--.....----....----140.......150.......160.......170........180.......190.-...-...200.......210.......220.......230.......240.......250.......260.....-..-270-.......280.......290.......300.......310---.---......----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MDKKKILVTGIVPKEGLRKLM-DR-FDV---TYSE-DRP-FSRDYVLEHLSEYDGWL-L-M-GQ-KG-DKEMIDA-GENLQIISLNAVGFDHVDTAYAKEKGIIVSNSPQAVRVPTAEMTFALILAASKRLAFYDSIVRSGEW----IDPSE----QRYQ----GLTLQGSTLGIYGMGRIGLTVANFAKAFGMT-VVYNDVYRLPEDKEKELGVTYLE-FDQ-LIKTADVITIHAPALPSTIHKFNKDVFAKMKNRSYLINAARGPIVSEEALIEALKEGEIAGAGLDVFENEP-QV-SEG-LRSLDNVIMSPHAGTGTIEGRRTLAEEAADNIIAFFDGK----P---QNIVNK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
29 PsiBlast_CBE 95.1837% -96 - C1 -2DBR GYAR_PYRHO B:[2-323] --KPKVFITREIPEVGIKMLE-DE-FEVE--VWGD-EKE-IPREILLKKVKEVDALV-T-MLSE-RI-DKEVFEN-APKLRIVANYAVGYDNIDIEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHP----KWFL----GYDVYGKTIGIIGLGRIGQAIAKRAKGFNMR-ILYYSRTR-KEEVERELNAEFKP-LED-LLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFEEEP-YY-NEE-LFKLDNVVLTPHIGSASFGAREGMAELVAKNLIAFKRGEI---P---PTLVNR----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
28 PsiBlast_CBE 94.7237% -98 - C1 -2DBR GYAR_PYRHO C:[2-323] --KPKVFITREIPEVGIKMLE-DE-FEVE--VWGD-EKE-IPREILLKKVKEVDALV-T-MLSE-RI-DKEVFEN-APKLRIVANYAVGYDNIDIEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHP----KWFL----GYDVYGKTIGIIGLGRIGQAIAKRAKGFNMR-ILYYSRTR-KEEVERELNAEFKP-LED-LLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFEEEP-YY-NEE-LFKLDNVVLTPHIGSASFGAREGMAELVAKNLIAFKRGEI---P---PTLVNR----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
26 PsiBlast_CBE 94.7137% -95 - C1 -2DBR GYAR_PYRHO E:[2-323] --KPKVFITREIPEVGIKMLE-DE-FEVE--VWGD-EKE-IPREILLKKVKEVDALV-T-MLSE-RI-DKEVFEN-APKLRIVANYAVGYDNIDIEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHP----KWFL----GYDVYGKTIGIIGLGRIGQAIAKRAKGFNMR-ILYYSRTR-KEEVERELNAEFKP-LED-LLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFEEEP-YY-NEE-LFKLDNVVLTPHIGSASFGAREGMAELVAKNLIAFKRGEI---P---PTLVNR----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24 PsiBlast_CBE 94.5537% -98 - C1 -2DBZ GYAR_PYRHO B:[2-323] --KPKVFITREIPEVGIKMLE-DE-FEVE--VWGD-EKE-IPREILLKKVKEVDALV-T-MLSE-RI-DKEVFEN-APKLRIVANYAVGYDNIDIEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHP----KWFL----GYDVYGKTIGIIGLGRIGQAIAKRAKGFNMR-ILYYSRTR-KEEVERELNAEFKP-LED-LLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFEEEP-YY-NEE-LFKLDNVVLTPHIGSASFGAREGMAELVAKNLIAFKRGEI---P---PTLVNR----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6 PsiBlast_PDB 94.4437% -98 - C1 -2DBR GYAR_PYRHO A:[2-323] --KPKVFITREIPEVGIKMLE-DE-FEVE--VWGD-EKE-IPREILLKKVKEVDALV-T-MLSE-RI-DKEVFEN-APKLRIVANYAVGYDNIDIEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHP----KWFL----GYDVYGKTIGIIGLGRIGQAIAKRAKGFNMR-ILYYSRTR-KEEVERELNAEFKP-LED-LLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFEEEP-YY-NEE-LFKLDNVVLTPHIGSASFGAREGMAELVAKNLIAFKRGEI---P---PTLVNR----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7 PsiBlast_PDB 94.2637% -95 - C1 -2DBZ GYAR_PYRHO A:[2-323] --KPKVFITREIPEVGIKMLE-DE-FEVE--VWGD-EKE-IPREILLKKVKEVDALV-T-MLSE-RI-DKEVFEN-APKLRIVANYAVGYDNIDIEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHP----KWFL----GYDVYGKTIGIIGLGRIGQAIAKRAKGFNMR-ILYYSRTR-KEEVERELNAEFKP-LED-LLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFEEEP-YY-NEE-LFKLDNVVLTPHIGSASFGAREGMAELVAKNLIAFKRGEI---P---PTLVNR----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25 PsiBlast_CBE 93.4737% -98 - C1 -2DBR GYAR_PYRHO F:[2-323] --KPKVFITREIPEVGIKMLE-DE-FEVE--VWGD-EKE-IPREILLKKVKEVDALV-T-MLSE-RI-DKEVFEN-APKLRIVANYAVGYDNIDIEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHP----KWFL----GYDVYGKTIGIIGLGRIGQAIAKRAKGFNMR-ILYYSRTR-KEEVERELNAEFKP-LED-LLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFEEEP-YY-NEE-LFKLDNVVLTPHIGSASFGAREGMAELVAKNLIAFKRGEI---P---PTLVNR----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
38 PsiBlast_CBE 93.3136%-107 * C1 *2CUK ? C:[2-310] ----RVLVTRTLPGKALDRLR-ERGLEV---EVHR-GLF-LPKAELLKRVEGAVGLIPT-V-ED-RI-DAEVMDR-AKGLKVIACYSVGVDHVDLEAARERGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDGLW----KAWHP----ELLL----GLDLQGLTLGLVGMGRIGQAVAKRALAFGMR-VVYH--ARTP----KPLPYPFLS-LEE-LLKEADVVSLHTPLTPETHRLLNRERLFAMKRGAILLNTARGALVDTEALVEALR-GHLFGAGLDVTDPEPLPP-GHP-LYALPNAVITPHIGSAGRTTRERMAEVAVENLLAVLEGRE---P---PNPVV-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
27 PsiBlast_CBE 93.3137% -98 - C1 -2DBR GYAR_PYRHO D:[2-323] --KPKVFITREIPEVGIKMLE-DE-FEVE--VWGD-EKE-IPREILLKKVKEVDALV-T-MLSE-RI-DKEVFEN-APKLRIVANYAVGYDNIDIEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHP----KWFL----GYDVYGKTIGIIGLGRIGQAIAKRAKGFNMR-ILYYSRTR-KEEVERELNAEFKP-LED-LLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFEEEP-YY-NEE-LFKLDNVVLTPHIGSASFGAREGMAELVAKNLIAFKRGEI---P---PTLVNR----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
113 HHSearch 92.9737% -97 - C1 -2DBQ GYAR_PYRHO A:[1-323] -MKPKVFITREIPEVGIKMLE-DE-FEV---EVWGDEKE-IPREILLKKVKEVDALV-TML-SE-RI-DKEVFEN-APKLRIVANYAVGYDNIDIEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEW----KKRGVAWHPKWFL----GYDVYGKTIGIIGLGRIGQAIAKRAKGFNMR-ILYYSRTRKEEVER-ELNAEFKP-LED-LLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFEEEP-YY-NEE-LFKLDNVVLTPHIGSASFGAREGMAELVAKNLIAFKRGEI---P---PTLVNR----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8 PsiBlast_PDB 92.7736% -96 - C1 -2DBQ GYAR_PYRHO A:[2-323] --KPKVFITREIPEVGIKMLE-DE-FEVE--VWGD-EKE-IPREILLKKVKEVDALVTM-L-SE-RI-DKEVFEN-APKLRIVANYAVGYDNIDIEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHP----KWFL----GYDVYGKTIGIIGLGRIGQAIAKRAKGFNMR-ILYYSRTR-KEEVERELNAEFKP-LED-LLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFEEEP-YY-NEE-LFKLDNVVLTPHIGSASFGAREGMAELVAKNLIAFKRGEI---P---PTLVNR----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22 PsiBlast_CBE 92.7036%-103 - C1 -1WWK ? B:[4-305] ---MKVLVAAPLHEKAIQVLK-DAGLEV---IY-E-EYP--DEDRLVELVKDVEAII-V-R-SKPKV-TRRVIES-APKLKVIARAGVGLDNIDVEAAKEKGIEVVNAPAASSRSVAELAVGLMFSVARKIAFADRKMREGVW-------AK----KEAM----GIELEGKTIGIIGFGRIGYQVAKIANALGMN-ILLYDPYP-NEERAKEVNGKFVD-LET-LLKESDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSRGPVVDTNALVKALKEGWIAGAGLDVFEEEP-LP-KDHPLTKFDNVVLTPHIGASTVEAQERAGVEVAEKVVKIL---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 92.3136%-101 - C1 -1WWK ? A:[4-307] ---MKVLVAAPLHEKAIQVLK-DAGLEV---IY-E-EYP--DEDRLVELVKDVEAII-V-R-SKPKV-TRRVIES-APKLKVIARAGVGLDNIDVEAAKEKGIEVVNAPAASSRSVAELAVGLMFSVARKIAFADRKMREGVW-------AK----KEAM----GIELEGKTIGIIGFGRIGYQVAKIANALGMN-ILLYDPYP-NEERAKEVNGKFVD-LET-LLKESDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSRGPVVDTNALVKALKEGWIAGAGLDVFEEEP-LP-KDHPLTKFDNVVLTPHIGASTVEAQERAGVEVAEKVVKILKG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
124 HHSearch 91.3836%-107 - C1 -2CUK - ? A:[1-311] ---MRVLVTRTLPGKALDRLRERG-LEV---EVHR-GLF-LPKAELLKRVEGAVGLI-PTV-ED-RI-DAEVMDR-AKGLKVIACYSVGVDHVDLEAARERGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDGLW----KAWHP----ELLL----GLDLQGLTLGLVGMGRIGQAVAKRALAFGMR-VVYHARTPKPLP------YPFLS-LEE-LLKEADVVSLHTPLTPETHRLLNRERLFAMKRGAILLNTARGALVDTEALVEALR-GHLFGAGLDVTDPEP-LPPGHP-LYALPNAVITPHIGSAGRTTRERMAEVAVENLLAVLEGRE---P---PNPVV-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
121 HHSearch 91.3336%-101 - C1 -1WWK ? A:[4-307] ---MKVLVAAPLHEKAIQVLKDAG-LEV---IYEE---Y-PDEDRLVELVKDVEAII-VRS-KP-KV-TRRVIES-APKLKVIARAGVGLDNIDVEAAKEKGIEVVNAPAASSRSVAELAVGLMFSVARKIAFADRKMREGVW----AKKE-------AM----GIELEGKTIGIIGFGRIGYQVAKIANALGMN-ILLYDPYPNEERAK-EVNGKFVD-LET-LLKESDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSRGPVVDTNALVKALKEGWIAGAGLDVFEEEP-LPKDHP-LTKFDNVVLTPHIGASTVEAQERAGVEVAEKVVKILKG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
31 PsiBlast_CBE 90.7933% -97 - C1 -2WWR GRHPR_HUMAN B:[10-323] ----KVFVTRRIPAEGRVALA-RA-ADCEVEQWDS-DEP-IPAKELERGVAGAHGLLCL-L-SD-HV-DKRILDAAGANLKVISTMSVGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGW----TSWKP----LWLC----GYGLTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEA-AEFQAEFVS-TPE-LAAQSDFIVVAC-------GLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDVTSPEPLPT-NHP-LLTLKNCVILPHIGSATHRTRNTMSLLAANNLLAGLRGE----P---MPSELK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
30 PsiBlast_CBE 90.5433%-102 - C1 -2WWR GRHPR_HUMAN C:[10-323] ----KVFVTRRIPAEGRVALA-RA-ADCEVEQWDS-DEP-IPAKELERGVAGAHGLLCL-L-SD-HV-DKRILDAAGANLKVISTMSVGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGW----TSWKP----LWLC----GYGLTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEA-AEFQAEFVS-TPE-LAAQSDFIVVAC-------GLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDVTSPEPLPT-NHP-LLTLKNCVILPHIGSATHRTRNTMSLLAANNLLAGLRGE----P---MPSELK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1 PsiBlast_PDB 90.3433%-105 - C1 -1GDH DHGY_HYPME A:[1-312] --KKKILITWPLPEAAMARAR-ES-YDV---IAHG-DDPKITIDEMIETAKSVDALL-ITL-NE-KC-RKEVIDRIPENIKCISTYSIGFDHIDLDACKARGIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSW----PGWEP----LELV----GEKLDNKTLGIYGFGSIGQALAKRAQGFDMD-IDYFDTHRASSSDEASYQATFHDSLDS-LLSVSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAGRLAYAGFDVFAGEP-NI-NEG-YYDLPNTFLFPHIGSAATQAREDMAHQANDLIDALFGGA----D---MSYALA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12 PsiBlast_PDB 89.8533%-100 - C1 -2WWR GRHPR_HUMAN A:[10-323] ----KVFVTRRIPAEGRVALA-RA-ADCEVEQWDS-DEP-IPAKELERGVAGAHGLLCL-L-SD-HV-DKRILDAAGANLKVISTMSVGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGW----TSWKP----LWLC----GYGLTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEA-AEFQAEFVS-TPE-LAAQSDFIVVAC-------GLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDVTSPEPLPT-NHP-LLTLKNCVILPHIGSATHRTRNTMSLLAANNLLAGLRGE----P---MPSELK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
104 Fugue 89.7332% -98 - C1 -1YGY SERA_MYCTU A:[3-529] -SLPVVLIADKLAPSTVAALG-DQ-VEV---RWVD---G-PDRDKLLAAVPEADALL-V-R-SA-TTVDAEVLAA-APKLKIVARAGVGLDNVDVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTW-------KR----SSFS----GTEIFGKTVGVVGLGRIGQLVAQRIAAFGAY-VVAYDPY-VSPARAAQLGIELLS-LDD-LLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHVRAAGLDVFATEP-CT-DSP-LFELAQVVVTPHLGASTAEAQDRAGTDVAESVRLALAGE----FV--PDAVNVGGGVVNEEVAPWLDLVRKLGVLAGVLSDELPVSLSVQVRGELAAEEVEVLRLSALRGLFSAVIEDAVTFVNAPALAAERGVTAEICKASESPNHRSVVDVRAVGADGSVVTVSGTLYGPQLSQKIVQINGRHFDLRAQGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRLDQDVPDDVRTAIAAAVDAYKLEVVDLS
44 PsiBlast_CBE 76.9935% -96 - C1 -1MX3 CTBP1_HUMAN A:[77-346] ---------------------------------------------------------------------REDLEK-FKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTR----VQSVE----QIREVASGAARIRGETLGIIGLGRVGQAVALRAKAFGFN-VLFYDPY-LSDGVERALGLQRVS-TLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSF-SQGPLKDAPNLICTPHAAWYSEQASIEMREEAAREIRRAITGRIPDSL---KNCVN-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
48 PsiBlast_CBE 76.2135% -98 - C1 -3GA0 CTBP1_RAT A:[80-350] ---------------------------------------------------------------------REDLEK-FKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRTTWLHQALREGTR----VQSVE----QIREVASGAARIRGETLGIIGLERVGQAVALRAKAFGFN-VLFYDPY-LSDGIERALGLQRVS-TLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSF-SQGPLKDAPNLICTPHAAWYSEQASIEMREEAAREIRRAITGRI---PDSLKNCVNK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
47 PsiBlast_CBE 75.0336% -91 - C1 -1HKU CTBP1_RAT A:[80-350] ---------------------------------------------------------------------REDLEK-FKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRTTWLHQALREGTR----VQSVE----QIREVASGAARIRGETLGIIGLGRVGQAVALRAKAFGFN-VLFYDPY-LSDGIERALGLQRVS-TLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSF-SQGPLKDAPNLICTPHAAWYSEQASIEMREEAAREIRRAITGRI---PDSLKNCVNK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------