@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo1221: (2016-03-22 )
MLEQLQTLKSEAETQINEASDLKTLNDLRVKYLGKKGPMTEIMKQMGKLSAEERPKMGSLANEVRTALTEAISSKQQILETEAINEKLKSETIDVTLPGTAPSIGTKHLLTQVIEEMEDMFIGMGYEIAEGPEVELDYYNFEALNLPKDHPARDMQDSFYITENTLLRTQTSPVQARTMEKHDFSKGPIKVICPGKVYRRDNDDATHSHQFTQIEGLVVGENITFADLKGTLTVLAKTMFGEEREIRLRPSFFPFTEPSVEMDISCFKCGGKGCRVCKGTGWIEILGSGMVHPNVLEMSGIDSTRYSGFAFGLGPERVAMLKYAVDDIRHLYTNDLRFTKQFQSTETGEI

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FYA_A_4(1B7Y)
SYFA_THETH
[Raw transfer]



FYA_A_4(1B7Y)
SYFA_THETH
[Raw transfer]



YSA_A_5(2ALY)
SYFA_THETH
[Raw transfer]



FA5_A_5(1JJC)
SYFA_THET8
[Raw transfer]



FA5_A_3(3CMQ)
SYFM_HUMAN
[Raw transfer]



FA5_A_3(3CMQ)
SYFM_HUMAN
[Raw transfer]



TYR_A_5(2AMC)
SYFA_THETH
[Raw transfer]



PHE_A_4(1B70)
SYFA_THETH
[Raw transfer]



PHE_A_3(4TVA)
SYFA_THETH
[Raw transfer]



GAX_A_4(2RHQ)
SYFA_STAHJ
[Raw transfer]



200_A_5(2AKW)
SYFA_THETH
[Raw transfer]



GAX_A_4(2RHQ)
SYFA_STAHJ
[Raw transfer]



DAH_A_3(3TEH)
SYFA_THETH
[Raw transfer]



MTY_A_3(3HFZ)
SYFA_THET8
[Raw transfer]



DAH_A_2(3TEG)
SYFM_HUMAN
[Raw transfer]



MTY_A_2(3HFV)
SYFM_HUMAN
[Raw transfer]
1 PsiBlast_PDB 97.6072% -93 - C3 -2RHQ 7.4 SYFA_STAHJ
31 HHSearch 97.5472% -95 - C3 -2RHQ 7.4 SYFA_STAHJ
21 PsiBlast_CBE 94.7572% -92 - C3 -2RHS - SYFA_STAHJ -
2 PsiBlast_PDB 90.7672% -87 - C3 -2RHS - SYFA_STAHJ -
3 PsiBlast_PDB 85.5852% -92 - C3 -4P71 - SYFA_PSEAE -
5 PsiBlast_PDB 84.2952% -91 - C3 -4P73 - SYFA_PSEAE -
24 PsiBlast_CBE 83.4652% -89 - C3 -4P73 - SYFA_PSEAE -
25 PsiBlast_CBE 83.0952% -88 - C3 -4P72 - SYFA_PSEAE -
7 PsiBlast_PDB 82.9152% -89 - C3 -4P75 - SYFA_PSEAE -
4 PsiBlast_PDB 82.8852% -92 - C3 -4P72 - SYFA_PSEAE -
22 PsiBlast_CBE 82.7952% -86 - C3 -4P75 - SYFA_PSEAE -
13 PsiBlast_PDB 82.5040% -71 - C3 -2IY5 - SYFA_THETH -
6 PsiBlast_PDB 81.6652% -87 - C3 -4P74 - SYFA_PSEAE -
23 PsiBlast_CBE 81.3852% -87 - C3 -4P74 - SYFA_PSEAE -
10 PsiBlast_PDB 81.2040% -63 - C3 -1EIY - SYFA_THET8 -
12 PsiBlast_PDB 81.1740% -85 - C3 -1JJC 9.4 SYFA_THET8
19 PsiBlast_PDB 80.9940% -89 - C3 -2AMC 3.5 SYFA_THETH
17 PsiBlast_PDB 80.9940% -87 - C3 -2AKW 3.6 SYFA_THETH
26 PsiBlast_CBE 80.9146% -70 - C3 -3PCO - ? -
49 Fugue 80.7643% -63 - C3 -1EIY - SYFA_THET8 -
14 PsiBlast_PDB 79.8640% -86 - C3 -3HFZ 3.6 SYFA_THET8
15 PsiBlast_PDB 79.7140% -84 - C3 -3TEH 3.9 SYFA_THETH
16 PsiBlast_PDB 79.4240% -86 - C3 -4TVA 3.5 SYFA_THETH
9 PsiBlast_PDB 79.0040% -85 - C3 -1B7Y 9.0 SYFA_THETH
11 PsiBlast_PDB 78.6440% -80 - C3 -1B70 3.5 SYFA_THETH
18 PsiBlast_PDB 78.3140% -82 - C3 -2ALY 8.3 SYFA_THETH
30 HHSearch 78.0944% -84 - C3 -1B7Y 9.0 SYFA_THETH
52 Fugue 68.1430% -58 - C3 -3CMQ 6.9 SYFM_HUMAN
27 PsiBlast_CBE 54.9632% -74 - C3 -3TEG 3.6 SYFM_HUMAN
20 PsiBlast_PDB 53.5332% -74 - C3 -3CMQ 6.9 SYFM_HUMAN
28 PsiBlast_CBE 53.4932% -72 - C3 -3HFV 4.2 SYFM_HUMAN