@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu27010: (2016-07-12 )
MCNQHQTRVLSVSHAKAKFEQTTIERRGLRPHDVLIDIKFSGICHSDIHSAFDEWGGGIFPMVPGHEIAGVVTAVGTKVTKLAVGDRVGVGCFVDSCGECEYCLNAEEQFCTKGVVQTYNSVDYDGNPTYGGYSQKIVVTDRFVVRIPDRLEMDVASPLLCAGITTYSPLKHWNVGPGKKVAIVGVGGLGHLAIQFAHAMGAEVTVLSRSMNKKEEALELGANHYFATSDPATFTALAGRFDVILNTVSANLDVDAYLSMLRIDGTLVSVGAPAKPDTYSVFSLIMGRRSIAGSLVGGIQETQEMLDFAAEHGIEPKIEVIGADQVDEAYERILRSDVRYRFVIDISTL

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NDP_A_3(3TWO)
?
[Raw transfer]



NDP_A_3(3TWO)
?
[Raw transfer]



NAP_B_8(1YQX)
?
[Raw transfer]



NAP_B_8(1YQD)
?
[Raw transfer]



NDP_B_6(3TWO)
?
[Raw transfer]



NAP_A_7(1YQD)
?
[Raw transfer]



NAP_A_7(1YQX)
?
[Raw transfer]



NDP_A_3(4OAQ)
?
[Raw transfer]



NAP_A_4(1PS0)
ADH6_YEAST
[Raw transfer]



NAP_A_7(1PIW)
ADH6_YEAST
[Raw transfer]



NAP_A_4(2CF6)
CADH5_ARATH
[Raw transfer]



NAP_B_8(1PIW)
ADH6_YEAST
[Raw transfer]



EPE_B_7(4OAQ)
?
[Raw transfer]



DTT_B_10(1YQD)
?
[Raw transfer]



ETF_A_6(5ENV)
ADH1_YEAST
[Raw transfer]



ETF_B_10(5ENV)
ADH1_YEAST
[Raw transfer]



DTT_A_4(4OAQ)
?
[Raw transfer]
22 PsiBlast_CBE 92.9449% -71 - C1 -1YQD 12.2 ?
2 PsiBlast_PDB 91.8149% -68 - C1 -1YQD - ? -
21 PsiBlast_CBE 91.3549% -71 - C1 -1YQX 11.3 ?
3 PsiBlast_PDB 91.2449% -69 - C1 -1YQX 12.5 ?
1 PsiBlast_PDB 88.6554% -55 - C1 -1UUF - YAHK_ECOLI -
122 HHSearch 87.5851% -61 - C1 -1UUF - YAHK_ECOLI -
132 HHSearch 87.0844% -53 - C1 -3TWO 11.9 ?
4 PsiBlast_PDB 87.0244% -55 - C1 -3TWO 11.9 ?
23 PsiBlast_CBE 86.7544% -55 - C1 -3TWO 11.9 ?
130 HHSearch 84.0447% -39 - C1 -1YQD 8.3 ?
6 PsiBlast_PDB 82.1844% -73 - C1 -2CF5 - CADH5_ARATH -
120 HHSearch 82.1542% -62 - C1 -2CF5 - CADH5_ARATH -
7 PsiBlast_PDB 80.1844% -66 - C1 -2CF6 7.6 CADH5_ARATH
10 PsiBlast_PDB 69.2539% -40 - C1 -1PIW 6.7 ADH6_YEAST
9 PsiBlast_PDB 68.7639% -41 - C1 -1Q1N - ADH6_YEAST -
25 PsiBlast_CBE 68.5139% -37 - C1 -1PIW 6.0 ADH6_YEAST
82 PsiBlast_CBE 68.3331% -71 - C1 -4GKV - ADHP_ECOLI -
24 PsiBlast_CBE 68.1843% -5 - C1 -4OAQ 2.0 ?
84 PsiBlast_CBE 67.9131% -69 - C1 -4GKV - ADHP_ECOLI -
129 HHSearch 67.8437% -26 - C1 -1PIW - ADH6_YEAST -
5 PsiBlast_PDB 65.6943% -7 - C1 -4OAQ 10.8 ?
8 PsiBlast_PDB 65.5439% -44 - C1 -1PS0 6.6 ADH6_YEAST
77 PsiBlast_CBE 63.3932% -31 * C1 *5ENV 2.4 ADH1_YEAST
76 PsiBlast_CBE 62.7832% -36 - C1 -5ENV 2.6 ADH1_YEAST