@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00069_CDC2H_: (2014-08-15 )
MEKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKENN

Atome Classification :

(19 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_5(4IC7)
MK07_HUMAN
[Raw transfer]




SU9_A_3(3PY1)
CDK2_HUMAN
[Raw transfer]




ANP_C_3(1J1B)
GSK3B_HUMAN
[Raw transfer]




JWS_A_4(3PXZ)
CDK2_HUMAN
[Raw transfer]




ADP_A_4(2B9H)
FUS3_YEAST
[Raw transfer]




ADP_A_4(3NIZ)
?
[Raw transfer]




GOL_A_4(3N9X)
?
[Raw transfer]




ATP_E_5(1UA2)
CDK7_HUMAN
[Raw transfer]




SU9_A_4(3PY0)
CDK2_HUMAN
[Raw transfer]




X01_A_3(3QL8)
CDK2_HUMAN
[Raw transfer]




38R_A_3(4BGQ)
CDKL5_HUMAN
[Raw transfer]




JWS_A_2(3PXY)
CDK2_HUMAN
[Raw transfer]




PVB_B_4(1V0P)
CDC2H_PLAFK
[Raw transfer]




0SR_A_3(4F6U)
CDK8_HUMAN
[Raw transfer]




GOL_A_3(3N9X)
?
[Raw transfer]




2AN_A_3(3PXQ)
CDK2_HUMAN
[Raw transfer]




X07_A_3(3QQF)
CDK2_HUMAN
[Raw transfer]




Z3R_A_6(4AU8)
CDK5_HUMAN
[Raw transfer]




2AN_A_8(3PXF)
CDK2_HUMAN
[Raw transfer]




1CK_A_2(4EK4)
CDK2_HUMAN
[Raw transfer]




2AN_A_4(3PY1)
CDK2_HUMAN
[Raw transfer]




2AN_A_2(3PXZ)
CDK2_HUMAN
[Raw transfer]




2AN_A_7(3PXF)
CDK2_HUMAN
[Raw transfer]




EDO_A_2(3PY0)
CDK2_HUMAN
[Raw transfer]




EDO_A_2(3PY1)
CDK2_HUMAN
[Raw transfer]




23 PsiBlast_CBE 93.3399%-129 - C1 -1V0P 7.3 CDC2H_PLAFK
12 PsiBlast_PDB 84.7163%-114 - C1 -3PXF 6.8 CDK2_HUMAN
15 PsiBlast_PDB 84.5863%-116 - C1 -3PXY 5.4 CDK2_HUMAN
20 PsiBlast_PDB 84.4863%-120 - C1 -3QQF 4.6 CDK2_HUMAN
19 PsiBlast_PDB 83.1063%-113 - C1 -3QL8 5.0 CDK2_HUMAN
16 PsiBlast_PDB 82.9163%-114 - C1 -3PXZ 5.4 CDK2_HUMAN
17 PsiBlast_PDB 82.4463%-114 - C1 -3PY0 5.7 CDK2_HUMAN
13 PsiBlast_PDB 82.0063%-113 - C1 -3PXQ 5.3 CDK2_HUMAN
18 PsiBlast_PDB 81.6863%-106 - C1 -3PY1 5.8 CDK2_HUMAN
40 HHSearch 78.9466%-110 - C1 -3NIZ 4.2 ?
41 HHSearch 75.5861%-105 - C1 -4AU8 4.8 CDK5_HUMAN
43 HHSearch 66.9741% -97 - C1 -3N9X 2.7 ?
57 HHSearch 64.7839%-102 - C1 -2B9H 5.3 FUS3_YEAST
56 HHSearch 64.3934%-108 - C1 -1J1B 4.4 GSK3B_HUMAN
37 HHSearch 63.3642% -96 - C1 -1UA2 5.0 CDK7_HUMAN
52 HHSearch 60.8539%-104 - C1 -4BGQ 7.8 CDKL5_HUMAN
45 HHSearch 60.6538% -94 - C1 -4IC7 5.0 MK07_HUMAN
53 HHSearch 59.9840%-104 - C1 -4F6U 9.1 CDK8_HUMAN
36 HHSearch 37.9363% 23 - C1 -4EK4 3.3 CDK2_HUMAN