@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00069_DAPK2_: (2014-08-15 )
MFQASMRSPNMEPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQYVRRRWKLSFSIVSLCNHLTRSLMKKVHLRPDEDLRNCESDTEEDIARRKALHPRRRSSTS

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_B_6(2YAA)
DAPK2_MOUSE
[Raw transfer]




ADP_A_2(2W4J)
DAPK1_HUMAN
[Raw transfer]




ACP_C_12(3ZXT)
DAPK1_HUMAN
[Raw transfer]




ADP_A_2(2XUU)
DAPK1_HUMAN
[Raw transfer]




ADP_A_2(2W4K)
DAPK1_HUMAN
[Raw transfer]




ACP_A_5(3ZXT)
DAPK1_HUMAN
[Raw transfer]




ATP_A_3(2YAA)
DAPK2_MOUSE
[Raw transfer]




ACP_D_13(3ZXT)
DAPK1_HUMAN
[Raw transfer]




ANP_A_8(3Q5I)
?
[Raw transfer]




ANP_A_7(3LIJ)
?
[Raw transfer]




IQU_D_8(2CKE)
DAPK2_HUMAN
[Raw transfer]




IQU_B_6(2CKE)
DAPK2_HUMAN
[Raw transfer]




IQU_C_7(2CKE)
DAPK2_HUMAN
[Raw transfer]




IQU_A_5(2CKE)
DAPK2_HUMAN
[Raw transfer]




STU_B_2(1WVY)
DAPK1_HUMAN
[Raw transfer]




MES_A_2(2Y0A)
DAPK1_HUMAN
[Raw transfer]




1PE_A_2(4B4L)
DAPK1_HUMAN
[Raw transfer]




QUE_A_2(3LM5)
ST17B_HUMAN
[Raw transfer]




MES_A_2(2Y0A)
DAPK1_HUMAN
[Raw transfer]




OSV_A_2(2YAK)
DAPK1_HUMAN
[Raw transfer]




16X_A_3(2X4F)
MYLK4_HUMAN
[Raw transfer]




DKI_A_2(2W4O)
KCC4_HUMAN
[Raw transfer]




BK3_A_6(3MWU)
?
[Raw transfer]




DB8_A_2(3SOA)
KCC2A_HUMAN
[Raw transfer]




EDO_A_5(2JAM)
KCC1G_HUMAN
[Raw transfer]




26 PsiBlast_CBE 90.1399%-111 - C1 -2CKE 4.2 DAPK2_HUMAN
2 PsiBlast_PDB 89.3997%-104 - C1 -2YAA 5.2 DAPK2_MOUSE
5 PsiBlast_PDB 89.1199%-109 - C1 -2CKE 4.1 DAPK2_HUMAN
22 PsiBlast_CBE 88.7797%-107 - C1 -2YAA 5.9 DAPK2_MOUSE
25 PsiBlast_CBE 86.9099%-109 - C1 -2CKE 4.2 DAPK2_HUMAN
24 PsiBlast_CBE 86.5399%-107 - C1 -2CKE 4.3 DAPK2_HUMAN
12 PsiBlast_PDB 81.4375% -97 - C1 -2W4K 5.8 DAPK1_HUMAN
56 HHSearch 81.3375%-100 - C1 -2Y0A 2.8 DAPK1_HUMAN
10 PsiBlast_PDB 78.1572% -97 - C1 -2XUU 5.9 DAPK1_HUMAN
11 PsiBlast_PDB 77.8272% -95 - C1 -4B4L 2.5 DAPK1_HUMAN
15 PsiBlast_PDB 76.9877%-109 - C1 -2YAK 9.4 DAPK1_HUMAN
19 PsiBlast_PDB 72.6278%-105 - C1 -2W4J 5.6 DAPK1_HUMAN
40 PsiBlast_CBE 72.5178%-109 - C1 -1WVY 8.1 DAPK1_HUMAN
38 PsiBlast_CBE 64.5977%-129 - C1 -3ZXT 4.0 DAPK1_HUMAN
39 PsiBlast_CBE 63.4277%-117 - C1 -3ZXT 4.1 DAPK1_HUMAN
69 HHSearch 60.9648%-112 * C1 *2X4F 6.4 MYLK4_HUMAN
17 PsiBlast_PDB 60.3777%-120 - C1 -3ZXT 4.1 DAPK1_HUMAN
70 HHSearch 57.9435%-105 - C1 -3Q5I 4.5 ?
68 HHSearch 52.3546%-108 - C1 -3LM5 5.5 ST17B_HUMAN
65 HHSearch 49.3536% -94 - C1 -3LIJ 3.9 ?
64 HHSearch 46.3034% -84 - C1 -3MWU 6.4 ?
62 HHSearch 44.4136% -81 - C1 -3SOA 3.6 KCC2A_HUMAN
71 HHSearch 40.3737% -82 - C1 -2JAM 2.0 KCC1G_HUMAN
67 HHSearch 37.7038% -92 - C1 -2W4O 3.9 KCC4_HUMAN