@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00069_NEK6_H: (2014-08-18 )
MAGQPGHMPHGGSSNNLCHTLGPVHPPDPQRHPNTLSFRCSLADFQIEKKIGRGQFSEVYKATCLLDRKTVALKKVQIFEMMDAKARQDCVKEIGLLKQLNHPNIIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSETTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPGEHYSEKLRELVSMCICPDPHQRPDIGYVHQVAKQMHIWMSST

Atome Classification :

(11 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

VGK_A_2(2WQO)
NEK2_HUMAN
[Raw transfer]




XK3_A_2(2XK3)
NEK2_HUMAN
[Raw transfer]




EQH_A_2(2XK6)
NEK2_HUMAN
[Raw transfer]




OL2_A_2(2XK4)
NEK2_HUMAN
[Raw transfer]




WI2_A_2(2XKE)
NEK2_HUMAN
[Raw transfer]




ANP_B_9(2A19)
E2AK2_HUMAN
[Raw transfer]




BX1_A_2(2XKF)
NEK2_HUMAN
[Raw transfer]




5R1_A_2(2XK8)
NEK2_HUMAN
[Raw transfer]




ADP_A_2(2WQN)
NEK7_HUMAN
[Raw transfer]




GOL_A_14(2XNO)
NEK2_HUMAN
[Raw transfer]




ADP_A_2(2W5A)
NEK2_HUMAN
[Raw transfer]




ADP_A_2(2W5A)
NEK2_HUMAN
[Raw transfer]




WCX_A_2(2XNP)
NEK2_HUMAN
[Raw transfer]




2 PsiBlast_PDB 94.4781%-134 - C1 -2WQN 4.8 NEK7_HUMAN
31 HHSearch 69.3338%-118 - C1 -2W5A 5.3 NEK2_HUMAN
7 PsiBlast_PDB 60.5437%-114 - C1 -2XK6 5.6 NEK2_HUMAN
13 PsiBlast_PDB 59.0237%-122 - C1 -2XKE 6.1 NEK2_HUMAN
12 PsiBlast_PDB 58.6237%-116 - C1 -2XKF 6.1 NEK2_HUMAN
9 PsiBlast_PDB 57.9337%-117 - C1 -2XK8 5.9 NEK2_HUMAN
17 PsiBlast_PDB 57.7837%-112 - C1 -2XNP 8.4 NEK2_HUMAN
16 PsiBlast_PDB 57.6637%-114 - C1 -2XNO 2.9 NEK2_HUMAN
6 PsiBlast_PDB 57.2337%-112 - C1 -2XK4 6.4 NEK2_HUMAN
4 PsiBlast_PDB 56.2937%-118 - C1 -2WQO 7.3 NEK2_HUMAN
5 PsiBlast_PDB 55.8337%-115 - C1 -2XK3 6.2 NEK2_HUMAN