@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00089_FA10_H: (2014-08-23 )
MGRPLHLVLLSASLAGLLLLGESLFIRREQANNILARVTRANSFLEEMKKGHLERECMEETCSYEEAREVFEDSDKTNEFWNKYKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPYPCGKQTLERRKRSVAQATSSSGEAPDSITWKPYDAADLDPTENPFDLLDFNQTQPERGDNNLTRIVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGRQSTRLKMLEVPYVDRNSCKLSSSFIITQNMFCAGYDTKQEDACQGDSGGPHVTRFKDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMKTRGLPKAKSHAPEVITSSPLK

Atome Classification :

(41 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GSJ_A_3(2J4I)

[Raw transfer]




LZI_B_7(2VWM)
?
[Raw transfer]




LZI_A_5(2VWM)

[Raw transfer]




S00_H_5(3RM2)
?
[Raw transfer]




931_A_3(2Y81)
?
[Raw transfer]




GSI_A_5(2VH0)

[Raw transfer]




1NK_H_3(4JZE)
?
[Raw transfer]




IIE_B_4(2BQW)
?
[Raw transfer]




A7I_B_4(4A7I)
?
[Raw transfer]




443_A_3(3KL6)

[Raw transfer]




GSK_A_4(2CJI)
?
[Raw transfer]




G15_A_3(2J94)
?
[Raw transfer]




LZF_B_8(2VVC)
?
[Raw transfer]




GSV_A_3(2VH6)
?
[Raw transfer]




461_A_3(2WYG)
FA10_HUMAN
[Raw transfer]




LZF_A_5(2VVC)
FA10_HUMAN
[Raw transfer]




701_A_3(2UWO)
FA10_HUMAN
[Raw transfer]




GSX_A_3(2J95)

[Raw transfer]




RRP_A_4(1NFU)

[Raw transfer]




GS5_A_3(2J38)
?
[Raw transfer]




898_A_3(2WYJ)
?
[Raw transfer]




RPR_A_4(1EZQ)
?
[Raw transfer]




GS6_A_3(2J34)

[Raw transfer]




RTR_A_4(1NFY)
?
[Raw transfer]




GSQ_A_3(2J2U)

[Raw transfer]




IIB_B_4(2BQ6)
?
[Raw transfer]




895_A_3(2UWL)
?
[Raw transfer]




PR2_A_4(1F0S)
?
[Raw transfer]




RDR_A_4(1NFX)

[Raw transfer]




CBB_B_4(1LPK)
?
[Raw transfer]




RRR_A_4(1NFW)
?
[Raw transfer]




IID_A_3(2BQ7)
?
[Raw transfer]




815_A_4(1F0R)

[Raw transfer]




CMI_B_4(1LQD)
?
[Raw transfer]




IMA_B_4(1LPG)
?
[Raw transfer]




0G6_C_3(1AUT)
PROC_HUMAN
[Raw transfer]




CMB_B_4(1LPZ)
?
[Raw transfer]




INH_A_2(3BG8)

[Raw transfer]




EDO_A_4(3KL6)

[Raw transfer]




CHAIN_L_2(2WPH)
?
[Raw transfer]

-

CHAIN_I_3(1FXY)
TRY1_HUMAN
[Raw transfer]

-

CH2_I_5(1FXY)
TRY1_HUMAN
[Raw transfer]




38 PsiBlast_CBE 96.32100%-106 - C3 -2UWO 7.1 FA10_HUMAN
16 PsiBlast_PDB 96.04100%-109 - C3 -2J2U 6.4
19 PsiBlast_PDB 95.96100%-106 - C3 -2J4I 7.1
42 PsiBlast_CBE 95.84100%-100 - C3 -2BQ7 7.7 ?
20 PsiBlast_PDB 95.83100%-104 - C3 -2J94 6.7 ?
34 PsiBlast_CBE 95.72100%-110 - C3 -2WYG 7.5 FA10_HUMAN
62 PsiBlast_CBE 95.6699%-102 - C3 -2VVC 9.3 FA10_HUMAN
9 PsiBlast_PDB 95.51100%-104 - C3 -1LPG 7.5 ?
8 PsiBlast_PDB 95.47100%-105 - C3 -1NFY 7.0 ?
2 PsiBlast_PDB 95.45100%-103 - C3 -1F0R 6.7
61 PsiBlast_CBE 95.4499%-114 - C3 -2VVC 9.8 ?
36 PsiBlast_CBE 95.37100%-104 - C3 -2VH0 8.3
11 PsiBlast_PDB 95.34100%-103 - C3 -1LPZ 9.2 ?
40 PsiBlast_CBE 95.33100%-106 - C3 -2J95 6.8
29 PsiBlast_CBE 95.30100%-103 - C3 -2Y81 8.6 ?
39 PsiBlast_CBE 95.29100%-106 - C3 -2UWL 6.1 ?
12 PsiBlast_PDB 95.24100%-104 - C3 -1LQD 8.2 ?
10 PsiBlast_PDB 95.22100%-101 - C3 -1LPK 8.2 ?
5 PsiBlast_PDB 95.21100%-103 - C3 -1NFU 6.4
41 PsiBlast_CBE 95.15100%-103 - C3 -2BQW 8.4 ?
27 PsiBlast_CBE 95.10100% -97 - C3 -4A7I 7.9 ?
15 PsiBlast_PDB 95.05100%-102 - C3 -2CJI 6.9 ?
56 PsiBlast_CBE 95.0499%-112 - C3 -2VWM 9.3 ?
57 PsiBlast_CBE 95.0399%-103 - C3 -2VWM 9.5
3 PsiBlast_PDB 94.87100% -97 - C3 -1F0S 6.5 ?
43 PsiBlast_CBE 94.86100% -97 - C3 -2BQ6 9.3 ?
7 PsiBlast_PDB 94.76100%-100 - C3 -1NFX 8.0
18 PsiBlast_PDB 94.74100%-104 - C3 -2J38 6.7 ?
1 PsiBlast_PDB 94.66100%-104 - C3 -1EZQ 8.9 ?
33 PsiBlast_CBE 94.62100%-108 - C3 -2WYJ 7.7 ?
44 PsiBlast_CBE 94.47100%-103 - C3 -3KL6 8.1
6 PsiBlast_PDB 94.44100% -98 - C3 -1NFW 7.4 ?
35 PsiBlast_CBE 94.31100% -99 - C3 -2VH6 8.1 ?
17 PsiBlast_PDB 94.21100%-102 - C3 -2J34 6.8
89 HHSearch 83.5267% -87 - C3 -1FXY 4.4 TRY1_HUMAN
78 HHSearch 78.3039% -92 - C3 -4JZE 7.3 ?
88 HHSearch 78.2042% -94 - C3 -3RM2 5.3 ?
80 HHSearch 78.1741% -91 - C3 -3NXP - THRB_HUMAN
79 HHSearch 75.9446% -94 - C3 -2WPH 5.9 ?
81 HHSearch 73.4235% -92 - C3 -1AUT 1.8 PROC_HUMAN
96 HHSearch 68.1833% -87 - C3 -3BG8 4.1