@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00089_FA10_R: (2014-08-23 )
MANPLHLVLLGAALAGLLLSGSSVFISRRAANDVLARTRRANSFLEELKKGNLERECMEENCSYEEALEVFEDREKTNEFWNKYVDGDQCESNPCQNQGTCKDGLGMYTCSCVEGYEGQDCEPVTRKLCSLDNGGCDQFCKEEENSVLCSCASGYTLGDNGKSCISTELFPCGKVTLGRWRRSPATNSSEGPPEAPGPEQQDDGNLTATENPFNLLDSPEPPPEDDSSSLVRIVGGQDCRDGECPWQALLVNEENEGFCGGTILSEYHVLTAAHCLHQAKRFKVRVGDRDTEHEEGNEETHEVEVVVKHNRFVKETYDFDIAVLRLKTPITFRRNVAPACLPQKDWAESTLMAQKTGIVSGFGRTHEMGRLSTTLKMLEVPYVDRNSCKRSSSFTITQNMFCAGYDARPEDACQGDSGGPHVTRFRDTYFVTGIVSWGEGCARKGKFGVYTKVSNFLKWIEKSMRARAVPVAEAAGTPGPTQPTIKGSPS

Atome Classification :

(44 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GSJ_A_3(2J4I)

[Raw transfer]




S00_H_5(3RM2)
?
[Raw transfer]




1NK_H_3(4JZE)
?
[Raw transfer]




G15_A_3(2J94)
?
[Raw transfer]




GSI_A_5(2VH0)

[Raw transfer]




443_A_3(3KL6)

[Raw transfer]




FI1_B_3(3SW2)
?
[Raw transfer]




A7I_B_4(4A7I)
?
[Raw transfer]




MBM_D_13(3K9X)
?
[Raw transfer]




GSK_A_4(2CJI)
?
[Raw transfer]




931_A_3(2Y81)
?
[Raw transfer]




YET_B_7(3HPT)
?
[Raw transfer]




GSV_A_3(2VH6)
?
[Raw transfer]




MBM_B_8(3K9X)
?
[Raw transfer]




IIE_B_4(2BQW)
?
[Raw transfer]




461_A_3(2WYG)
FA10_HUMAN
[Raw transfer]




ENS_D_6(3ENS)
?
[Raw transfer]




898_A_3(2WYJ)
?
[Raw transfer]




GS5_A_3(2J38)
?
[Raw transfer]




701_A_3(2UWO)
FA10_HUMAN
[Raw transfer]




YET_D_17(3HPT)
?
[Raw transfer]




GSX_A_3(2J95)

[Raw transfer]




ENS_B_5(3ENS)
?
[Raw transfer]




GS6_A_3(2J34)

[Raw transfer]




RTR_A_4(1NFY)
?
[Raw transfer]




RRP_A_4(1NFU)

[Raw transfer]




895_A_3(2UWL)
?
[Raw transfer]




GSQ_A_3(2J2U)

[Raw transfer]




RDR_A_4(1NFX)

[Raw transfer]




RRR_A_4(1NFW)
?
[Raw transfer]




IIB_B_4(2BQ6)
?
[Raw transfer]




PR2_A_4(1F0S)
?
[Raw transfer]




RPR_A_4(1EZQ)
?
[Raw transfer]




815_A_4(1F0R)

[Raw transfer]




IID_A_3(2BQ7)
?
[Raw transfer]




CBB_B_4(1LPK)
?
[Raw transfer]




IMA_B_4(1LPG)
?
[Raw transfer]




0G6_C_3(1AUT)
PROC_HUMAN
[Raw transfer]




CMI_B_4(1LQD)
?
[Raw transfer]




CMB_B_4(1LPZ)
?
[Raw transfer]




INH_A_2(3BG8)

[Raw transfer]




EDO_A_4(3KL6)

[Raw transfer]




CHAIN_L_2(2WPH)
?
[Raw transfer]

-

CHAIN_I_3(1FXY)
TRY1_HUMAN
[Raw transfer]

-

CH2_I_5(1FXY)
TRY1_HUMAN
[Raw transfer]




57 PsiBlast_CBE 94.3984% -98 - C3 -3HPT 8.1 ?
56 PsiBlast_CBE 94.0684% -99 - C3 -3K9X 8.1 ?
55 PsiBlast_CBE 93.8084% -98 - C3 -3K9X 8.2 ?
34 PsiBlast_CBE 93.5883%-101 - C3 -2WYG 7.5 FA10_HUMAN
58 PsiBlast_CBE 93.4784% -97 - C3 -3HPT 8.0 ?
41 PsiBlast_CBE 93.3683% -96 - C3 -2J94 6.7 ?
38 PsiBlast_CBE 93.1383% -97 - C3 -2UWO 7.1 FA10_HUMAN
20 PsiBlast_PDB 93.1383%-102 - C3 -2J2U 6.4
36 PsiBlast_CBE 93.1283% -96 - C3 -2VH0 8.3
42 PsiBlast_CBE 93.0483% -98 - C3 -2J4I 7.1
12 PsiBlast_PDB 92.9183% -96 - C3 -1NFY 7.0 ?
40 PsiBlast_CBE 92.8883% -97 - C3 -2J95 6.8
14 PsiBlast_PDB 92.8283% -92 - C3 -1LPK 8.2 ?
60 PsiBlast_CBE 92.6484% -95 - C3 -3ENS 8.0 ?
19 PsiBlast_PDB 92.6483% -95 - C3 -2CJI 6.9 ?
59 PsiBlast_CBE 92.6084% -96 - C3 -3ENS 7.8 ?
29 PsiBlast_CBE 92.5083% -95 - C3 -2Y81 8.6 ?
9 PsiBlast_PDB 92.4683% -95 - C3 -1NFU 6.4
13 PsiBlast_PDB 92.3883% -97 - C3 -1LPG 7.8 ?
7 PsiBlast_PDB 92.2883% -90 - C3 -1F0S 6.5 ?
15 PsiBlast_PDB 92.2683% -96 - C3 -1LPZ 9.2 ?
43 PsiBlast_CBE 92.2583% -98 - C3 -2J38 6.7 ?
6 PsiBlast_PDB 92.1983% -95 - C3 -1F0R 6.7
39 PsiBlast_CBE 92.1683% -97 - C3 -2UWL 6.1 ?
44 PsiBlast_CBE 91.9783% -94 - C3 -2J34 6.8
16 PsiBlast_PDB 91.9083% -96 - C3 -1LQD 8.2 ?
5 PsiBlast_PDB 91.6383% -96 - C3 -1EZQ 8.9 ?
27 PsiBlast_CBE 91.6183% -91 - C3 -4A7I 7.9 ?
11 PsiBlast_PDB 91.5983% -93 - C3 -1NFX 8.0
3 PsiBlast_PDB 91.3982% -90 - C3 -2BQ7 7.7 ?
10 PsiBlast_PDB 91.2983% -90 - C3 -1NFW 7.4 ?
45 PsiBlast_CBE 91.2583% -96 - C3 -3KL6 8.1
33 PsiBlast_CBE 91.0983% -99 - C3 -2WYJ 7.7 ?
35 PsiBlast_CBE 91.0783% -92 - C3 -2VH6 8.2 ?
54 PsiBlast_CBE 90.5684% -97 - C3 -3SW2 7.8 ?
4 PsiBlast_PDB 90.3082% -94 - C3 -2BQW 8.4 ?
2 PsiBlast_PDB 89.8582% -91 - C3 -2BQ6 9.3 ?
89 HHSearch 79.9662% -82 - C3 -1FXY 4.1 TRY1_HUMAN
80 HHSearch 78.2542% -83 - C3 -3NXP - THRB_HUMAN
77 HHSearch 78.2241% -91 - C3 -4JZE 6.2 ?
87 HHSearch 75.8242% -82 - C3 -3RM2 5.4 ?
78 HHSearch 74.3845% -88 - C3 -2WPH 5.7 ?
79 HHSearch 70.7037% -82 - C3 -1AUT 1.9 PROC_HUMAN
95 HHSearch 67.0533% -83 - C3 -3BG8 4.1