@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00089_PROC_H: (2014-08-23 )
MWQLTSLLLFVATWGISGTPAPLDSVFSSSERAHQVLRIRKRANSFLEELRHSSLERECIEEICDFEEAKEIFQNVDDTLAFWSKHVDGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCHPAVKFPCGRPWKRMEKKRSHLKRDTEDQEDQVDPRLIDGKMTRRGDSPWQVVLLDSKKKLACGAVLIHPSWVLTAAHCMDESKKLLVRLGEYDLRRWEKWELDLDIKEVFVHPNYSKSTTDNDIALLHLAQPATLSQTIVPICLPDSGLAERELNQAGQETLVTGWGYHSSREKEAKRNRTFVLNFIKIPVVPHNECSEVMSNMVSENMLCAGILGDRQDACEGDSGGPMVASFHGTWFLVGLVSWGEGCGLLHNYGVYTKVSRYLDWIHGHIRDKEAPQKSWAP

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

0G6_H_3(3F6U)
?
[Raw transfer]



0G6_C_3(1AUT)
PROC_HUMAN
[Raw transfer]



1NK_H_3(4JZE)
?
[Raw transfer]



0G6_C_3(1AUT)
PROC_HUMAN
[Raw transfer]



S00_H_5(3RM2)
?
[Raw transfer]



UNB_A_4(2BDY)
?
[Raw transfer]



PR2_A_4(1F0S)
?
[Raw transfer]



RPR_A_4(1EZQ)
?
[Raw transfer]



CBB_B_4(1LPK)
?
[Raw transfer]



815_A_4(1F0R)

[Raw transfer]



IMA_B_4(1LPG)
?
[Raw transfer]



RRP_A_4(1NFU)

[Raw transfer]



GSK_A_4(2CJI)
?
[Raw transfer]



CMB_B_4(1LPZ)
?
[Raw transfer]



CMI_B_4(1LQD)
?
[Raw transfer]



GOL_H_8(3RM2)
?
[Raw transfer]



APA_A_5(1A0L)
TRYB2_HUMAN
[Raw transfer]



INH_A_2(3BG8)

[Raw transfer]



RTR_A_4(1NFY)
?
[Raw transfer]



GS6_A_3(2J34)

[Raw transfer]



GSQ_A_3(2J2U)

[Raw transfer]



RDR_A_4(1NFX)

[Raw transfer]



RRR_A_4(1NFW)
?
[Raw transfer]



CHAIN_L_2(2WPH)
?
[Raw transfer]
-
CHAIN_I_3(1FXY)
TRY1_HUMAN
[Raw transfer]
-
CH2_I_5(1FXY)
TRY1_HUMAN
[Raw transfer]
2 PsiBlast_PDB 92.20100%-134 - C1 -3F6U 4.6 ?
34 HHSearch 91.94100%-131 - C1 -1AUT 5.1 PROC_HUMAN
38 HHSearch 74.2339%-124 - C1 -4JZE 7.0 ?
46 HHSearch 73.2941%-114 - C1 -3RM2 6.7 ?
37 HHSearch 72.9441%-109 - C1 -3NXP - THRB_HUMAN
42 HHSearch 72.4139% -94 - C1 -2BDY 6.7 ?
19 PsiBlast_PDB 72.2435%-119 - C1 -2J2U 5.5
6 PsiBlast_PDB 72.1335%-110 - C1 -1F0S 5.0 ?
14 PsiBlast_PDB 72.0335%-111 - C1 -1LPZ 7.4 ?
12 PsiBlast_PDB 71.6135%-111 - C1 -1LPG 6.3 ?
13 PsiBlast_PDB 71.5335%-107 - C1 -1LPK 6.1 ?
15 PsiBlast_PDB 71.2235%-110 - C1 -1LQD 6.9 ?
5 PsiBlast_PDB 71.1535%-111 - C1 -1F0R 5.3
18 PsiBlast_PDB 70.9535%-108 - C1 -2CJI 5.3 ?
11 PsiBlast_PDB 70.9535%-112 - C1 -1NFY 5.8 ?
4 PsiBlast_PDB 70.8635%-110 - C1 -1EZQ 7.6 ?
20 PsiBlast_PDB 70.8235%-110 - C1 -2J34 5.7
8 PsiBlast_PDB 70.6935%-109 - C1 -1NFU 5.7
10 PsiBlast_PDB 70.5835%-110 - C1 -1NFX 6.4
39 HHSearch 70.4336%-115 - C1 -2WPH 4.4 ?
9 PsiBlast_PDB 70.3635%-107 - C1 -1NFW 6.0 ?
23 Fugue 69.6841%-131 - C1 -1A0L 3.5 TRYB2_HUMAN
55 HHSearch 69.1036%-115 - C1 -3BG8 4.0
47 HHSearch 68.7034%-113 - C1 -1FXY 3.6 TRY1_HUMAN