@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00089_UROK_M: (2014-08-24 )
MKVWLASLFLCALVVKNSEGGSVLGAPDESNCGCQNGGVCVSYKYFSRIRRCSCPRKFQGEHCEIDASKTCYHGNGDSYRGKANTDTKGRPCLAWNAPAVLQKPYNAHRPDAISLGLGKHNYCRNPDNQKRPWCYVQIGLRQFVQECMVHDCSLSKKPSSSVDQQGFQCGQKALRPRFKIVGGEFTEVENQPWFAAIYQKNKGGSPPSFKCGGSLISPCWVASAAHCFIQLPKKENYVVYLGQSKESSYNPGEMKFEVEQLILHEYYREDSLAYHNDIALLKIRTSTGQCAQPSRSIQTICLPPRFTDAPFGSDCEITGFGKESESDYLYPKNLKMSVVKLVSHEQCMQPHYYGSEINYKMLCAADPEWKTDSCKGDSGGPLICNIEGRPTLSGIVSWGRGCAEKNKPGVYTRVSHFLDWIQSHIGEEKGLAF

Atome Classification :

(55 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ZBR_B_10(4JK5)
?
[Raw transfer]



ZBR_B_9(4JK6)
?
[Raw transfer]



7IN_D_4(1VJA)
?
[Raw transfer]



120_B_3(1GI7)
?
[Raw transfer]



655_B_5(1O3P)
?
[Raw transfer]



2IN_D_4(1SC8)
?
[Raw transfer]



UI2_E_5(1SQO)
UROK_HUMAN
[Raw transfer]



UI1_E_5(1SQA)
?
[Raw transfer]



BMZ_B_5(1GI8)
?
[Raw transfer]



5IN_D_4(1VJ9)
?
[Raw transfer]



6UP_A_2(4FUD)
?
[Raw transfer]



696_B_3(1O5A)
?
[Raw transfer]



123_B_3(1GI9)
?
[Raw transfer]



239_E_5(1OWH)
UROK_HUMAN
[Raw transfer]



UI3_B_2(1SQT)
UROK_HUMAN
[Raw transfer]



135_B_5(1GJA)
?
[Raw transfer]



BAM_B_6(1C5Z)
?
[Raw transfer]



2UP_A_2(4FU8)
UROK_HUMAN
[Raw transfer]



130_B_5(1GJC)
?
[Raw transfer]



303_B_2(1OWK)
?
[Raw transfer]



675_E_5(1OWE)
?
[Raw transfer]



155_B_2(1OWJ)
UROK_HUMAN
[Raw transfer]



134_B_5(1GJ9)
?
[Raw transfer]



1NK_H_3(4JZE)
?
[Raw transfer]



130_B_5(1GJB)
?
[Raw transfer]



745_B_2(1U6Q)
?
[Raw transfer]



8UP_A_2(4FUF)
UROK_HUMAN
[Raw transfer]



UI3_A_2(4FUI)
?
[Raw transfer]



132_B_5(1GJ7)
?
[Raw transfer]



1UP_A_6(4FU7)
UROK_HUMAN
[Raw transfer]



1U9_A_2(4FUJ)
?
[Raw transfer]



7UP_A_2(4FUE)
UROK_HUMAN
[Raw transfer]



ESP_B_6(1C5Y)
?
[Raw transfer]



497_B_2(1OWD)
UROK_HUMAN
[Raw transfer]



ESI_B_3(1O5B)
?
[Raw transfer]



GOL_A_6(4FUE)
UROK_HUMAN
[Raw transfer]



ESI_B_6(1C5W)
?
[Raw transfer]



GOL_A_10(4FUJ)
?
[Raw transfer]



133_B_5(1GJ8)
?
[Raw transfer]



136_B_5(1GJD)
?
[Raw transfer]



ESI_B_6(1C5X)
?
[Raw transfer]



9UP_A_2(4FUG)
?
[Raw transfer]



4UP_A_2(4FUB)
UROK_HUMAN
[Raw transfer]



BEN_B_2(2OQ5)
TM11E_HUMAN
[Raw transfer]



GOL_A_10(4FUF)
UROK_HUMAN
[Raw transfer]



426_B_2(1OWI)
?
[Raw transfer]



ABV_U_3(3MHW)
?
[Raw transfer]



438_B_5(3IG6)
?
[Raw transfer]



INH_A_2(3BG8)

[Raw transfer]



B25_U_2(3MWI)
?
[Raw transfer]



CHAIN_B_2(4MNX)
?
[Raw transfer]
-
CHAIN_B_2(4GLY)
?
[Raw transfer]
-
CHAIN_B_2(4MNW)
?
[Raw transfer]
-
SIN_A_3(4FUE)
UROK_HUMAN
[Raw transfer]



1NB_B_2(1BRU)
CEL2A_PIG
[Raw transfer]



SIN_A_11(4FUI)
?
[Raw transfer]



SIN_A_3(4FUJ)
?
[Raw transfer]



SIN_A_4(4FUB)
UROK_HUMAN
[Raw transfer]



SIN_A_3(4FUF)
UROK_HUMAN
[Raw transfer]



CHAIN_B_2(4MNV)
?
[Raw transfer]
-
29O_D_18(4MNY)
?
[Raw transfer]



29O_C_17(4MNY)
?
[Raw transfer]



P6G_A_12(4GLY)
?
[Raw transfer]



CHAIN_C_3(4MNY)
?
[Raw transfer]
-
SIN_A_4(4FU8)
UROK_HUMAN
[Raw transfer]



CHAIN_D_4(4MNY)
?
[Raw transfer]
-
CHAIN_B_2(4JK6)
?
[Raw transfer]
-
CHAIN_B_2(4JK5)
?
[Raw transfer]
-
2 PsiBlast_PDB 89.4771%-100 - C3 -1SC8 5.5 ?
3 PsiBlast_PDB 87.8271%-100 - C3 -1VJ9 5.0 ?
4 PsiBlast_PDB 87.7071% -98 - C3 -1VJA 5.5 ?
67 HHSearch 87.6471% -98 * C3 *3MHW 2.6 ?
8 PsiBlast_PDB 87.5770% -99 - C3 -1GJA 5.4 ?
9 PsiBlast_PDB 87.5370% -97 - C3 -1GJB 6.1 ?
6 PsiBlast_PDB 87.4870% -99 - C3 -1GJ7 6.7 ?
38 PsiBlast_CBE 87.3971% -97 - C3 -4MNW 5.6 ?
40 PsiBlast_CBE 87.1971% -97 - C3 -4JK6 6.2 ?
19 PsiBlast_PDB 87.0970% -96 - C3 -1O5A 5.6 ?
13 PsiBlast_PDB 86.9870% -98 - C3 -1C5Y 3.6 ?
11 PsiBlast_PDB 86.9470% -97 - C3 -1C5W 4.3 ?
37 PsiBlast_CBE 86.9171% -94 - C3 -4MNX 6.3 ?
20 PsiBlast_PDB 86.7770% -97 - C3 -1O5B 4.1 ?
15 PsiBlast_PDB 86.7670% -99 - C3 -1GJ9 5.7 ?
35 PsiBlast_CBE 86.6071% -94 - C3 -4MNY 5.9 ?
24 PsiBlast_CBE 86.5471% -94 - C3 -1U6Q 4.9 ?
42 PsiBlast_CBE 86.5071% -96 - C3 -4GLY 7.6 ?
48 PsiBlast_CBE 86.4871% -94 - C3 -4FUD 4.3 ?
47 PsiBlast_CBE 86.4271% -96 - C3 -4FUE 6.6 UROK_HUMAN
50 PsiBlast_CBE 86.3971% -93 - C3 -4FU8 4.3 UROK_HUMAN
33 PsiBlast_CBE 86.3771% -96 - C3 -1OWE 5.2 ?
32 PsiBlast_CBE 86.2471% -97 - C3 -1OWH 4.8 UROK_HUMAN
17 PsiBlast_PDB 86.2270% -96 - C3 -1GJC 5.6 ?
16 PsiBlast_PDB 86.2070% -98 - C3 -1GJD 6.0 ?
14 PsiBlast_PDB 86.1670%-101 - C3 -1C5Z 3.2 ?
12 PsiBlast_PDB 86.1570% -98 - C3 -1C5X 4.3 ?
45 PsiBlast_CBE 86.1471% -94 - C3 -4FUG 4.5 ?
44 PsiBlast_CBE 86.1471% -94 - C3 -4FUI 5.2 ?
34 PsiBlast_CBE 86.0571% -93 - C3 -3MWI 3.0 ?
39 PsiBlast_CBE 86.0371% -95 - C3 -4MNV 3.5 ?
49 PsiBlast_CBE 85.9971% -94 - C3 -4FUB 4.3 UROK_HUMAN
36 PsiBlast_CBE 85.9471% -95 - C3 -4MNY 6.1 ?
41 PsiBlast_CBE 85.8971% -95 - C3 -4JK5 5.0 ?
43 PsiBlast_CBE 85.8571% -93 - C3 -4FUJ 5.5 ?
28 PsiBlast_CBE 85.7871% -95 - C3 -1OWI 4.1 ?
10 PsiBlast_PDB 85.7770% -97 - C3 -1O3P 5.9 ?
5 PsiBlast_PDB 85.6970% -97 - C3 -3IG6 6.0 ?
30 PsiBlast_CBE 85.5871% -94 - C3 -1SQO 5.4 UROK_HUMAN
46 PsiBlast_CBE 85.5271% -94 - C3 -4FUF 5.7 UROK_HUMAN
27 PsiBlast_CBE 85.5171% -93 - C3 -1OWJ 5.0 UROK_HUMAN
21 PsiBlast_CBE 85.5071% -95 - C3 -1GI9 5.0 ?
31 PsiBlast_CBE 85.4571% -93 - C3 -1SQA 6.5 ?
51 PsiBlast_CBE 85.4171% -93 - C3 -4FU7 4.8 UROK_HUMAN
29 PsiBlast_CBE 85.4171% -91 - C3 -1OWD 5.2 UROK_HUMAN
7 PsiBlast_PDB 85.4170% -95 - C3 -1GJ8 4.8 ?
22 PsiBlast_CBE 85.3671% -95 - C3 -1GI8 5.3 ?
25 PsiBlast_CBE 84.8571% -93 - C3 -1SQT 5.2 UROK_HUMAN
23 PsiBlast_CBE 84.6271% -97 - C3 -1GI7 3.6 ?
26 PsiBlast_CBE 84.3771% -88 - C3 -1OWK 5.0 ?
54 Fugue 84.2770%-106 - C3 -1LMW - ?
80 HHSearch 69.0937% -92 - C3 -2OQ5 3.0 TM11E_HUMAN
79 HHSearch 66.0236% -84 - C3 -3BG8 4.0
88 HHSearch 64.6336% -91 - C3 -1BRU 2.6 CEL2A_PIG
91 HHSearch 63.3733% -78 - C3 -4JZE 7.3 ?