@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00089_UROK_R: (2014-08-24 )
MRVWLASLFLCALVANSEGGSELEASDESNCGCQNGGVCVSYKYFSSIRRCSCPKKFKGEHCEIDTSKTCYHGNGQSYRGKANTDTKGRPCLAWNSPAVLQQTYNAHRSDALSLGLGKHNYCRNPDNQRRPWCYVQIGLKQFVQECMVQDCSLSKKPSSTVDQQGFQCGQKALRPRFKIVGGEFTVVENQPWFAAIYLKNKGGSPPSFKCGGSLISPCWVASATHCFVNQPKKEEYVVYLGQSKRNSYNPGEMKFEVEQLILHEDFSDETLAFHNDIALLKIRTSTGQCAQPSRTIQTICLPPRFGDAPFGSDCEITGFGQESATDYFYPKDLKMSVVKIISHEQCKQPHYYGSEINYKMLCAADPEWKTDSCSGDSGGPLICNIDGRPTLSGIVSWGSGCAEKNKPGVYTRVSYFLNWIQSHIGEENGLAF

Atome Classification :

(57 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

120_B_3(1GI7)
?
[Raw transfer]




239_E_5(1OWH)
UROK_HUMAN
[Raw transfer]




7IN_D_4(1VJA)
?
[Raw transfer]




4UP_A_2(4FUB)
UROK_HUMAN
[Raw transfer]




655_B_5(1O3P)
?
[Raw transfer]




303_B_2(1OWK)
?
[Raw transfer]




6UP_A_2(4FUD)
?
[Raw transfer]




497_B_2(1OWD)
UROK_HUMAN
[Raw transfer]




675_E_5(1OWE)
?
[Raw transfer]




426_B_2(1OWI)
?
[Raw transfer]




UI2_E_5(1SQO)
UROK_HUMAN
[Raw transfer]




1NK_H_3(4JZE)
?
[Raw transfer]




2IN_D_4(1SC8)
?
[Raw transfer]




155_B_2(1OWJ)
UROK_HUMAN
[Raw transfer]




UI1_E_5(1SQA)
?
[Raw transfer]




2UP_A_2(4FU8)
UROK_HUMAN
[Raw transfer]




5IN_D_4(1VJ9)
?
[Raw transfer]




7UP_A_2(4FUE)
UROK_HUMAN
[Raw transfer]




UI3_A_2(4FUI)
?
[Raw transfer]




438_B_5(3IG6)
?
[Raw transfer]




BAM_B_6(1C5Z)
?
[Raw transfer]




1UP_A_6(4FU7)
UROK_HUMAN
[Raw transfer]




135_B_5(1GJA)
?
[Raw transfer]




BMZ_B_5(1GI8)
?
[Raw transfer]




UI3_B_2(1SQT)
UROK_HUMAN
[Raw transfer]




8UP_A_2(4FUF)
UROK_HUMAN
[Raw transfer]




745_B_2(1U6Q)
?
[Raw transfer]




696_B_3(1O5A)
?
[Raw transfer]




123_B_3(1GI9)
?
[Raw transfer]




132_B_5(1GJ7)
?
[Raw transfer]




1U9_A_2(4FUJ)
?
[Raw transfer]




ESI_B_3(1O5B)
?
[Raw transfer]




GOL_A_6(4FUE)
UROK_HUMAN
[Raw transfer]




ESI_B_6(1C5W)
?
[Raw transfer]




130_B_5(1GJC)
?
[Raw transfer]




BEN_B_2(2OQ5)
TM11E_HUMAN
[Raw transfer]




130_B_5(1GJB)
?
[Raw transfer]




134_B_5(1GJ9)
?
[Raw transfer]




ESP_B_6(1C5Y)
?
[Raw transfer]




9UP_A_2(4FUG)
?
[Raw transfer]




ABV_U_3(3MHW)
?
[Raw transfer]




PBZ_D_4(1FIW)
ACRO_SHEEP
[Raw transfer]




ESI_B_6(1C5X)
?
[Raw transfer]




136_B_5(1GJD)
?
[Raw transfer]




INH_A_2(3BG8)

[Raw transfer]




438_D_6(3IG6)
?
[Raw transfer]




133_B_5(1GJ8)
?
[Raw transfer]




B25_U_2(3MWI)
?
[Raw transfer]




CHAIN_B_2(4MNX)
?
[Raw transfer]

-

CHAIN_B_2(4GLY)
?
[Raw transfer]

-

CHAIN_B_2(4MNW)
?
[Raw transfer]

-

CHAIN_B_2(4JK5)
?
[Raw transfer]

-

CHAIN_B_2(4JK6)
?
[Raw transfer]

-

SIN_A_3(4FUE)
UROK_HUMAN
[Raw transfer]




1NB_B_2(1BRU)
CEL2A_PIG
[Raw transfer]




SIN_A_4(4FUB)
UROK_HUMAN
[Raw transfer]




SIN_A_3(4FUJ)
?
[Raw transfer]




SIN_A_3(4FUF)
UROK_HUMAN
[Raw transfer]




CHAIN_B_2(4MNV)
?
[Raw transfer]

-

SIN_A_11(4FUI)
?
[Raw transfer]




P6G_A_12(4GLY)
?
[Raw transfer]




29O_D_18(4MNY)
?
[Raw transfer]




29O_C_17(4MNY)
?
[Raw transfer]




438_B_5(3IG6)
?
[Raw transfer]




SIN_A_4(4FU8)
UROK_HUMAN
[Raw transfer]




CHAIN_C_3(4MNY)
?
[Raw transfer]

-

CHAIN_D_4(4MNY)
?
[Raw transfer]

-

2 PsiBlast_PDB 88.7271%-105 - C2 -1SC8 5.3 ?
72 HHSearch 88.1471%-105 * C2 *3MHW 2.5 ?
4 PsiBlast_PDB 87.9371%-104 - C2 -1VJA 5.3 ?
53 PsiBlast_CBE 87.8571%-105 - C2 -4GLY 6.6 ?
8 PsiBlast_PDB 87.8070%-107 - C2 -1GJA 4.9 ?
40 PsiBlast_CBE 87.6871%-104 - C2 -4FUE 6.2 UROK_HUMAN
6 PsiBlast_PDB 87.6670%-106 - C2 -1GJ7 6.2 ?
3 PsiBlast_PDB 87.5971%-106 - C2 -1VJ9 6.9 ?
51 PsiBlast_CBE 87.5771%-103 - C2 -4JK6 4.8 ?
11 PsiBlast_PDB 87.4970%-105 - C2 -1C5W 4.1 ?
15 PsiBlast_PDB 87.4270%-106 - C2 -1GJ9 4.8 ?
49 PsiBlast_CBE 87.3871%-103 - C2 -4MNW 5.0 ?
20 PsiBlast_PDB 87.2570%-106 - C2 -1O5B 3.9 ?
9 PsiBlast_PDB 87.2370%-103 - C2 -1GJB 5.6 ?
12 PsiBlast_PDB 87.2070%-106 - C2 -1C5X 4.1 ?
13 PsiBlast_PDB 87.0470%-106 - C2 -1C5Y 3.2 ?
21 PsiBlast_CBE 87.0371%-108 - C2 -3IG6 5.7 ?
33 PsiBlast_CBE 87.0271%-104 - C2 -1OWH 4.9 UROK_HUMAN
36 PsiBlast_CBE 86.9471%-101 - C2 -4FUJ 5.1 ?
19 PsiBlast_PDB 86.8270%-103 - C2 -1O5A 5.2 ?
48 PsiBlast_CBE 86.7271%-100 - C2 -4MNX 4.9 ?
41 PsiBlast_CBE 86.7171%-101 - C2 -4FUD 3.9 ?
16 PsiBlast_PDB 86.7070%-106 - C2 -1GJD 5.4 ?
42 PsiBlast_CBE 86.6671%-101 - C2 -4FUB 5.2 UROK_HUMAN
34 PsiBlast_CBE 86.5971%-104 - C2 -1OWE 4.8 ?
43 PsiBlast_CBE 86.5471%-100 - C2 -4FU8 4.0 UROK_HUMAN
29 PsiBlast_CBE 86.4571%-103 - C2 -1OWI 5.1 ?
50 PsiBlast_CBE 86.3971%-102 - C2 -4MNV 2.9 ?
5 PsiBlast_PDB 86.3571%-103 - C2 -3IG6 4.2 ?
38 PsiBlast_CBE 86.2471%-101 - C2 -4FUG 4.1 ?
32 PsiBlast_CBE 86.2471% -99 - C2 -1SQA 5.9 ?
25 PsiBlast_CBE 86.1771%-102 - C2 -1U6Q 5.1 ?
39 PsiBlast_CBE 86.1671%-101 - C2 -4FUF 5.2 UROK_HUMAN
52 PsiBlast_CBE 86.1571%-101 - C2 -4JK5 5.3 ?
44 PsiBlast_CBE 86.1571%-100 - C2 -4FU7 3.9 UROK_HUMAN
17 PsiBlast_PDB 86.1270%-103 - C2 -1GJC 5.5 ?
37 PsiBlast_CBE 86.0171%-101 - C2 -4FUI 4.7 ?
35 PsiBlast_CBE 85.8871% -99 - C2 -3MWI 2.7 ?
10 PsiBlast_PDB 85.8570%-103 - C2 -1O3P 5.5 ?
14 PsiBlast_PDB 85.7770%-109 - C2 -1C5Z 3.2 ?
46 PsiBlast_CBE 85.7671%-100 - C2 -4MNY 5.0 ?
22 PsiBlast_CBE 85.7071%-102 - C2 -1GI9 4.4 ?
30 PsiBlast_CBE 85.6971% -99 - C2 -1OWD 5.0 UROK_HUMAN
47 PsiBlast_CBE 85.6171%-102 - C2 -4MNY 4.8 ?
7 PsiBlast_PDB 85.5570%-102 - C2 -1GJ8 4.1 ?
23 PsiBlast_CBE 85.4671%-102 - C2 -1GI8 4.6 ?
31 PsiBlast_CBE 85.2671%-100 - C2 -1SQO 5.0 UROK_HUMAN
24 PsiBlast_CBE 84.4571%-102 - C2 -1GI7 3.9 ?
26 PsiBlast_CBE 84.4371%-100 - C2 -1SQT 4.6 UROK_HUMAN
18 PsiBlast_PDB 83.8770% -99 - C2 -1LMW - ?
28 PsiBlast_CBE 83.8071%-100 - C2 -1OWJ 4.8 UROK_HUMAN
27 PsiBlast_CBE 83.6371% -97 - C2 -1OWK 4.4 ?
93 HHSearch 66.8835% -96 - C2 -1BRU 3.5 CEL2A_PIG
85 HHSearch 66.5135% -97 - C2 -2OQ5 3.1 TM11E_HUMAN
97 HHSearch 64.6733% -81 - C2 -1FIW 3.0 ACRO_SHEEP
83 HHSearch 62.0133% -87 - C2 -3BG8 4.0
94 HHSearch 61.7032% -85 - C2 -4JZE 6.6 ?