@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00128_MALX3_: (2014-08-28 )
MTISSAHPETEPKWWKEATFYQIYPASFKDSNDDGWGDMKGIASKLEYIKELGADAIWISPFYDSPQDDMGYDIANYEKVWPTYGTNEDCFALIEKTHKLGMKFITDLVINHCSSEHEWFKESRSSKTNPKRDWFFWRPPKGYDAEGKPIPPNNWKSYFGGSAWTFDEKTQEFYLRLFCSTQPDLNWENEDCRKAIYESAVGYWLDHGVDGFRIDVGSLYSKVVGLPDAPVVDKNSTWQSSDPYTLNGPRIHEFHQEMNQFIRNRVKDGREIMTVGEMQHASDETKRLYTSASRHELSELFNFSHTDVGTSPLFRYNLVPFELKDWKIALAELFRYINGTDCWSTIYLENHDQPRSITRFGDDSPKNRVISGKLLSVLLSALTGTLYVYQGQELGQINFKNWPVEKYEDVEIRNNYNAIKEEHGENSEEMKKFLEAIALISRDHARTPMQWSREEPNAGFSGPSAKPWFYLNDSFREGINVEDEIKDPNSVLNFWKEALKFRKAHKDITVYGYDFEFIDLDNKKLFSFTKKYNNKTLFAALNFSSDATDFKIPNDDSSFKLEFGNYPKKEVDASSRTLKPWEGRIYISE

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GLC_A_2(3AXI)
MALX3_YEAST
[Raw transfer]



TEU_A_4(4H8V)
?
[Raw transfer]



GLC_A_2(3A4A)
MALX3_YEAST
[Raw transfer]



SUC_A_3(2PWE)
?
[Raw transfer]



GLC_A_2(3AXH)
MALX3_YEAST
[Raw transfer]



SUC_A_4(4HPH)
?
[Raw transfer]



SUC_A_4(4HPH)
?
[Raw transfer]



NOJ_A_11(3GBE)
?
[Raw transfer]



NOJ_A_5(2PWD)
?
[Raw transfer]



GLC_A_4(4HOZ)
?
[Raw transfer]



GLC_A_4(4HP5)
?
[Raw transfer]



CTS_A_5(2PWG)
?
[Raw transfer]



TRS_A_4(4GO8)
?
[Raw transfer]



GOL_A_2(4HOW)
?
[Raw transfer]



TRS_A_5(1ZJB)
?
[Raw transfer]



GOL_A_6(2ZIC)
DEXB_STRMU
[Raw transfer]



TRS_A_2(4MB1)
O16G1_BACSU
[Raw transfer]



GOL_A_3(4H2C)
?
[Raw transfer]



TRS_A_5(1ZJA)
?
[Raw transfer]



GOL_A_3(4GIN)
?
[Raw transfer]



TRS_A_2(4HOX)
?
[Raw transfer]



TRS_A_5(2ZIC)
DEXB_STRMU
[Raw transfer]



GOL_A_3(4HOX)
?
[Raw transfer]



GOL_A_2(4HP5)
?
[Raw transfer]



GOL_A_3(4HOZ)
?
[Raw transfer]



EDO_A_4(3GBD)
?
[Raw transfer]



EDO_A_2(3GBD)
?
[Raw transfer]



EDO_A_2(3GBE)
?
[Raw transfer]
2 PsiBlast_PDB 98.0999% -58 - C1 -3AXI 3.7 MALX3_YEAST
1 PsiBlast_PDB 97.7799% -58 - C1 -3AXH 4.2 MALX3_YEAST
22 PsiBlast_CBE 97.69100% -58 - C1 -3A4A 4.0 MALX3_YEAST
34 HHSearch 69.1443% -51 - C1 -4MB1 3.4 O16G1_BACSU
40 HHSearch 66.1539% -47 * C1 *1ZJA 2.7 ?
20 PsiBlast_PDB 65.7237% -45 - C1 -2PWE 4.2 ?
16 PsiBlast_PDB 65.5137% -45 - C1 -2PWD 4.0 ?
15 PsiBlast_PDB 65.0437% -46 - C1 -1ZJB 4.3 ?
13 PsiBlast_PDB 64.8837% -46 - C1 -4GO8 4.3 ?
4 PsiBlast_PDB 64.5536% -46 - C1 -4HOX 3.1 ?
18 PsiBlast_PDB 64.4937% -46 - C1 -2PWG 4.0 ?
6 PsiBlast_PDB 64.4136% -48 - C1 -4HP5 4.9 ?
7 PsiBlast_PDB 64.0536% -45 - C1 -4HOZ 4.1 ?
10 PsiBlast_PDB 64.0037% -44 - C1 -3GBE 3.4 ?
17 PsiBlast_PDB 63.6937% -45 - C1 -4H8V 4.5 ?
36 HHSearch 63.5837% -46 - C1 -4HPH 4.3 ?
12 PsiBlast_PDB 63.5437% -48 - C1 -4H2C 3.9 ?
3 PsiBlast_PDB 63.1835% -46 - C1 -4HOW 2.7 ?
9 PsiBlast_PDB 62.8537% -44 - C1 -3GBD 3.0 ?
11 PsiBlast_PDB 62.8237% -46 - C1 -4GIN 2.9 ?
39 HHSearch 59.1836% -50 - C1 -2ZIC 3.6 DEXB_STRMU