@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00704_CHIA_H: (2014-09-14 )
MTKLILLTGLVLILNLQLGSAYQLTCYFTNWAQYRPGLGRFMPDNIDPCLCTHLIYAFAGRQNNEITTIEWNDVTLYQAFNGLKNKNSQLKTLLAIGGWNFGTAPFTAMVSTPENRQTFITSVIKFLRQYEFDGLDFDWEYPGSRGSPPQDKHLFTVLVQEMREAFEQEAKQINKPRLMVTAAVAAGISNIQSGYEIPQLSQYLDYIHVMTYDLHGSWEGYTGENSPLYKYPTDTGSNAYLNVDYVMNYWKDNGAPAEKLIVGFPTYGHNFILSNPSNTGIGAPTSGAGPAGPYAKESGIWAYYEICTFLKNGATQGWDAPQEVPYAYQGNVWVGYDNIKSFDIKAQWLKHNKFGGAMVWAIDLDDFTGTFCNQGKFPLISTLKKALGLQSASCTAPAQPIEPITAAPSGSGNGSGSSSSGGSSGGSGFCAVRANGLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDTSCDCCNWA

Atome Classification :

(19 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AMI_A_5(3FY1)
CHIA_HUMAN
[Raw transfer]




AMI_B_8(3FY1)
CHIA_HUMAN
[Raw transfer]




GOL_B_5(3RME)
CHIA_HUMAN
[Raw transfer]




SUGAR_N_2(1LG1)
CHIT1_HUMAN
[Raw transfer]

-

RME_B_6(3RME)
CHIA_HUMAN
[Raw transfer]




GOL_A_3(3RME)
CHIA_HUMAN
[Raw transfer]




3RM_B_4(3RM4)
CHIA_HUMAN
[Raw transfer]




AMI_A_3(1HKK)
CHIT1_HUMAN
[Raw transfer]




RM8_B_4(3RM8)
CHIA_HUMAN
[Raw transfer]




3RM_A_3(3RM4)
CHIA_HUMAN
[Raw transfer]




RME_A_4(3RME)
CHIA_HUMAN
[Raw transfer]




RM8_A_3(3RM8)
CHIA_HUMAN
[Raw transfer]




AMI_A_4(1HKJ)
CHIT1_HUMAN
[Raw transfer]




ALI_A_4(1HKI)
CHIT1_HUMAN
[Raw transfer]




NAA_A_4(3FY1)
CHIA_HUMAN
[Raw transfer]




613_B_4(3RM9)
CHIA_HUMAN
[Raw transfer]




NAA_B_7(3FY1)
CHIA_HUMAN
[Raw transfer]




CFF_A_2(3G6M)
?
[Raw transfer]




613_A_3(3RM9)
CHIA_HUMAN
[Raw transfer]




NAG_A_2(1HKI)
CHIT1_HUMAN
[Raw transfer]




NAA_A_2(1HKJ)
CHIT1_HUMAN
[Raw transfer]




SUGAR_A_2(1HKK)
CHIT1_HUMAN
[Raw transfer]

-

GCS_A_2(1E9L)
CH3L3_MOUSE
[Raw transfer]




MPD_A_3(2PI6)
CH3L1_SHEEP
[Raw transfer]




EDO_B_2(1LG2)
CHIT1_HUMAN
[Raw transfer]




EDO_E_5(1LG2)
CHIT1_HUMAN
[Raw transfer]




MPD_A_4(2PI6)
CH3L1_SHEEP
[Raw transfer]




EDO_C_3(1LG2)
CHIT1_HUMAN
[Raw transfer]




NA1_A_3(3FY1)
CHIA_HUMAN
[Raw transfer]




NA1_A_3(3FY1)
CHIA_HUMAN
[Raw transfer]




NA1_B_6(3FY1)
CHIA_HUMAN
[Raw transfer]




NA1_A_3(1HKI)
CHIT1_HUMAN
[Raw transfer]




NA1_A_3(1HKJ)
CHIT1_HUMAN
[Raw transfer]




SUGAR_A_2(2PI6)
CH3L1_SHEEP
[Raw transfer]

-

6 PsiBlast_PDB 98.7598%-105 - C1 -3RME 5.0 CHIA_HUMAN
24 PsiBlast_CBE 98.3698%-105 - C1 -3RM4 6.7 CHIA_HUMAN
4 PsiBlast_PDB 98.1698%-104 - C1 -3RM8 8.0 CHIA_HUMAN
21 PsiBlast_CBE 98.0298%-107 - C1 -3RME 4.8 CHIA_HUMAN
5 PsiBlast_PDB 97.9798%-104 - C1 -3RM9 4.2 CHIA_HUMAN
22 PsiBlast_CBE 97.7698%-108 - C1 -3RM9 4.4 CHIA_HUMAN
47 HHSearch 97.7599%-105 - C1 -3FY1 4.3 CHIA_HUMAN
25 PsiBlast_CBE 97.6998%-108 - C1 -3FY1 4.4 CHIA_HUMAN
3 PsiBlast_PDB 97.6398%-107 - C1 -3RM4 6.6 CHIA_HUMAN
23 PsiBlast_CBE 97.4198%-106 - C1 -3RM8 8.0 CHIA_HUMAN
9 PsiBlast_PDB 84.5968% -95 - C1 -1E9L 1.3 CH3L3_MOUSE
17 PsiBlast_PDB 80.1156% -96 - C1 -1HKI 3.5 CHIT1_HUMAN
15 PsiBlast_PDB 79.4356%-100 - C1 -1LG2 3.4 CHIT1_HUMAN
20 PsiBlast_PDB 79.1956% -96 - C1 -1HKK 4.9 CHIT1_HUMAN
49 HHSearch 78.7652%-104 * C1 *2PI6 3.6 CH3L1_SHEEP
14 PsiBlast_PDB 78.4456% -97 - C1 -1LG1 5.8 CHIT1_HUMAN
18 PsiBlast_PDB 77.9656% -95 - C1 -1HKJ 4.2 CHIT1_HUMAN
53 HHSearch 67.7432% -88 - C1 -1ITX - CHIA1_BACCI
64 HHSearch 63.7030% -92 - C1 -3G6M 5.2 ?