@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF02244_CBPA1_: (2014-09-29 )
MQGLLILSVLLGAALGKEDFVGHQVLRITAADEAEVQTVKELEDLEHLQLDFWRGPGQPGSPIDVRVPFPSLQAVKVFLEAHGIRYRIMIEDVQSLLDEEQEQMFASQSRARSTNTFNYATYHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFSTGGSNRPAIWIDLGIHSREWITQATGVWFAKKFTEDYGQDPSFTAILDSMDIFLEIVTNPDGFAFTHSQNRLWRKTRSVTSSSLCVGVDANRNWDAGFGKAGASSSPCSETYHGKYANSEVEVKSIVDFVKDHGNFKAFLSIHSYSQLLLYPYGYTTQSIPDKTELNQVAKSAVEALKSLYGTSYKYGSIITTIYQASGGSIDWSYNQGIKYSFTFELRDTGRYGFLLPASQIIPTAQETWLGVLTIMEHTLNNLY

Atome Classification :

(42 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ZAF_A_3(6CPA)
CBPA1_BOVIN
[Raw transfer]



AGF_A_3(8CPA)
CBPA1_BOVIN
[Raw transfer]



FVF_A_3(7CPA)
CBPA1_BOVIN
[Raw transfer]



LHY_A_6(1HEE)
CBPA1_BOVIN
[Raw transfer]



BPX_E_9(3FX6)
CBPA1_BOVIN
[Raw transfer]



BPX_A_5(3FX6)
CBPA1_BOVIN
[Raw transfer]



LHY_E_12(1HEE)
CBPA1_BOVIN
[Raw transfer]



BPX_C_7(3FX6)
CBPA1_BOVIN
[Raw transfer]



23N_A_3(2RFH)
CBPA1_BOVIN
[Raw transfer]



LHY_B_8(1HEE)
CBPA1_BOVIN
[Raw transfer]



ING_E_12(1HDU)
CBPA1_BOVIN
[Raw transfer]



LHY_D_10(1HEE)
CBPA1_BOVIN
[Raw transfer]



ING_A_6(1HDU)
CBPA1_BOVIN
[Raw transfer]



CXA_A_3(1IY7)
CBPA1_BOVIN
[Raw transfer]



ING_B_8(1HDU)
CBPA1_BOVIN
[Raw transfer]



BHK_C_7(3FVL)
?
[Raw transfer]



ING_D_10(1HDU)
CBPA1_BOVIN
[Raw transfer]



BZS_A_3(1CBX)
CBPA1_BOVIN
[Raw transfer]



INF_A_2(1HDQ)
CBPA1_BOVIN
[Raw transfer]



PAY_A_3(2V77)
CBPA1_HUMAN
[Raw transfer]



PAY_B_7(2V77)
CBPA1_HUMAN
[Raw transfer]



BHK_E_9(3FVL)
?
[Raw transfer]



TYR_A_3(3CPA)
CBPA1_BOVIN
[Raw transfer]



DCY_A_3(1F57)
CBPA1_BOVIN
[Raw transfer]



BHK_A_5(3FVL)
CBPA1_BOVIN
[Raw transfer]



VAL_C_6(2BO9)
CBPA4_HUMAN
[Raw transfer]



CPM_A_3(1CPS)
CBPA1_BOVIN
[Raw transfer]



VAL_A_4(1PCA)
CBPA1_PIG
[Raw transfer]



CIT_A_4(3KGQ)
CBPA1_BOVIN
[Raw transfer]



VAL_A_4(1PCA)
CBPA1_PIG
[Raw transfer]



BTW_A_3(3I1U)
CBPA1_BOVIN
[Raw transfer]



BIP_D_12(1BAV)
CBPA1_BOVIN
[Raw transfer]



BIP_A_9(1BAV)
CBPA1_BOVIN
[Raw transfer]



BIP_C_11(1BAV)
CBPA1_BOVIN
[Raw transfer]



ARG_A_18(3D68)
CBPB2_HUMAN
[Raw transfer]



BIP_B_10(1BAV)
CBPA1_BOVIN
[Raw transfer]



TRS_A_7(1ARM)
CBPA1_BOVIN
[Raw transfer]



MRD_B_9(3HLP)
?
[Raw transfer]



MRD_A_4(3HLP)
?
[Raw transfer]



GLY_A_2(3CPA)
CBPA1_BOVIN
[Raw transfer]



GLU_A_4(1DTD)
CBPA2_HUMAN
[Raw transfer]



GLY_B_8(4CPA)
?
[Raw transfer]



MPD_A_5(3HLP)
?
[Raw transfer]



GLY_A_7(4CPA)
CBPA1_BOVIN
[Raw transfer]
62 HHSearch 97.6287% -95 - C2 -1PCA 3.4 CBPA1_PIG
13 PsiBlast_PDB 82.68100% -94 - C2 -1HDQ 4.6 CBPA1_BOVIN
16 PsiBlast_PDB 82.2199% -94 - C2 -3FX6 3.4 CBPA1_BOVIN
19 PsiBlast_PDB 82.0799% -93 - C2 -1F57 3.1 CBPA1_BOVIN
24 PsiBlast_CBE 82.0299% -94 - C2 -3FX6 3.7 CBPA1_BOVIN
27 PsiBlast_CBE 81.8199% -93 - C2 -2RFH 4.2 CBPA1_BOVIN
46 PsiBlast_CBE 81.7897% -94 - C2 -1HDU 5.4 CBPA1_BOVIN
42 PsiBlast_CBE 81.7897% -94 - C2 -1HEE 5.7 CBPA1_BOVIN
41 PsiBlast_CBE 81.7397% -93 - C2 -1IY7 6.0 CBPA1_BOVIN
48 PsiBlast_CBE 81.7097% -94 - C2 -1HDU 5.2 CBPA1_BOVIN
44 PsiBlast_CBE 81.7097% -94 - C2 -1HEE 5.6 CBPA1_BOVIN
49 PsiBlast_CBE 81.6797% -95 - C2 -1HDU 5.4 CBPA1_BOVIN
45 PsiBlast_CBE 81.6797% -95 - C2 -1HEE 5.7 CBPA1_BOVIN
34 PsiBlast_CBE 81.6497% -94 - C2 -8CPA 7.2 CBPA1_BOVIN
8 PsiBlast_PDB 81.6499% -94 - C2 -1ARM 3.0 CBPA1_BOVIN
21 PsiBlast_CBE 81.5199% -95 - C2 -3HLP 3.0 ?
3 PsiBlast_PDB 81.50100% -95 - C2 -3KGQ 3.9 CBPA1_BOVIN
40 PsiBlast_CBE 81.4597% -95 - C2 -3CPA 3.3 CBPA1_BOVIN
47 PsiBlast_CBE 81.4197% -94 - C2 -1HDU 5.1 CBPA1_BOVIN
43 PsiBlast_CBE 81.4197% -94 - C2 -1HEE 5.5 CBPA1_BOVIN
17 PsiBlast_PDB 81.4099% -93 - C2 -3FVL 3.2 CBPA1_BOVIN
10 PsiBlast_PDB 81.3899% -95 - C2 -3I1U 4.3 CBPA1_BOVIN
23 PsiBlast_CBE 81.3799% -92 - C2 -3FX6 3.9 CBPA1_BOVIN
35 PsiBlast_CBE 81.3097% -93 - C2 -7CPA 9.1 CBPA1_BOVIN
26 PsiBlast_CBE 81.2899% -93 - C2 -3FVL 3.1 ?
11 PsiBlast_PDB 81.2599% -93 - C2 -3HLP 3.3 ?
25 PsiBlast_CBE 80.9799% -92 - C2 -3FVL 3.7 ?
30 PsiBlast_CBE 80.8997% -91 - C2 -1BAV 3.4 CBPA1_BOVIN
32 PsiBlast_CBE 80.8397% -91 - C2 -1CPS 4.8 CBPA1_BOVIN
36 PsiBlast_CBE 80.7697% -91 - C2 -6CPA 7.2 CBPA1_BOVIN
33 PsiBlast_CBE 80.6597% -92 - C2 -1CBX 5.7 CBPA1_BOVIN
31 PsiBlast_CBE 80.4097% -91 - C2 -1BAV 3.7 CBPA1_BOVIN
29 PsiBlast_CBE 80.0797% -91 - C2 -1BAV 3.0 CBPA1_BOVIN
28 PsiBlast_CBE 80.0397% -91 - C2 -1BAV 3.7 CBPA1_BOVIN
38 PsiBlast_CBE 78.9597% -90 - C2 -4CPA 3.1 ?
51 PsiBlast_CBE 78.9481% -93 - C2 -2V77 6.0 CBPA1_HUMAN
39 PsiBlast_CBE 78.9197% -90 - C2 -4CPA 3.1 CBPA1_BOVIN
50 PsiBlast_CBE 78.0081% -91 - C2 -2V77 6.1 CBPA1_HUMAN
52 Fugue 73.7838% -81 - C2 -3D68 3.3 CBPB2_HUMAN
71 HHSearch 72.6967% -92 * C2 *1DTD 3.3 CBPA2_HUMAN
70 HHSearch 71.4061% -86 - C2 -2BO9 4.0 CBPA4_HUMAN
74 HHSearch 56.7533% -79 - C2 -4IHM - CBPT_THEVU